CX290880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.473e-15 Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+ LIVYC LPA L +G+FIV + + + + +++ +LE++W G+ + +WWRNEQ WVIGG S+H L G Sbjct: 964 TSLFLIVYCILPAISLFSGQFIVQSLDITFLIYLLSITLTLCMLSLLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQG 1044
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.473e-15 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSI LIVYC LPA L +G+FIV ++ + + +++ +LE++W G+ +++WWRNEQ W+IGG S+H L G Sbjct: 953 TSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQG 1033
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.473e-15 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSI LIVYC LPA L +G+FIV ++ + + +++ +LE++W G+ +++WWRNEQ W+IGG S+H L G Sbjct: 953 TSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQG 1033
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.473e-15 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+ LIVYC LPA L +G+FIV ++ + + I++ +LE++W G+ +++WWRNEQ W+IGG S+H L G Sbjct: 908 TSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQG 988
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 6.473e-15 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+ LIVYC LPA L +G+FIV ++ + + I++ +LE++W G+ +++WWRNEQ W+IGG S+H L G Sbjct: 908 TSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQG 988
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.104e-14 Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS LIVYC LPA L +G+FIV ++ + + + I++ +LE++W G+ +++WWRNEQ W+IGG S+H + G Sbjct: 928 TSFFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVIQG 1008
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14 Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+ L+ YC LPA L +GKFIV +S + + +++ +LE++W G+ + +WWRNEQ WVIGG S+H L G Sbjct: 986 TSVFLLAYCLLPAVSLFSGKFIVQRLSATFLAFLLVITLTLCLLALLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQG 1066
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.883e-14 Identity = 30/81 (37.04%), Postives = 50/81 (61.73%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSI ++ YC LP L +G F+V ++ + + + +S+ +LE++W G+ +++WWRNEQ W+IGG S+H L G Sbjct: 763 TSIFILTYCFLPPLSLFSGHFVVETLTGSFLIYLLIITLSLCGLAVLEVKWSGISLEEWWRNEQFWLIGGTSAHLVAVLQG 843
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.082e-13 Identity = 34/73 (46.58%), Postives = 49/73 (67.12%), Query Frame = 2 Query: 5 SIPLIVYCTLPAFCLLTGKFIVP-EISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASS 220 S+PL VYC LPA CLLTGK P ++S Y ++ I L S+AA+ LE++W V + WWR+E+LW++ S+ Sbjct: 630 SLPLTVYCALPAVCLLTGKSTFPSDVSYYDGVLLILLLFSVAASVALELRWSRVPLRAWWRDEKLWMVTATSA 702 The following BLAST results are available for this feature:
BLAST of CX290880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290880 ID=CX290880; Name=CX290880; organism=Citrus clementina; type=EST; length=251bpback to top |