CX291634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO1_ARATH (Protein argonaute OS=Arabidopsis thaliana GN=AGO1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20 Identity = 53/133 (39.85%), Postives = 80/133 (60.15%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFK----PLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 K+++QY+ NV LKIN K+GG N++L S+ +PLVS PTIIFG DV+H PG ++WP +++Y V +Q+ + E+I LFK P G+++ELL+ F +S+G KP +II +R Sbjct: 714 KMSKQYMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRSTGH-KPLRIIFYR 845
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO12_ORYSJ (Protein argonaute 12 OS=Oryza sativa subsp. japonica GN=AGO12 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 52/137 (37.96%), Postives = 82/137 (59.85%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLF----KPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFRSTLT 401 K +QYL N+ LK+N K+GG N++L K +P+++ PTI+FG DV+H SPG +WP +++Y+ V +QS + E+I +L+ PL G++RELL FY+ +GQ KPS+II +R ++ Sbjct: 731 KGGKQYLENLALKMNVKVGGRNTVLEDALHKKIPILTDRPTIVFGADVTHPSPGEDASPSIAAVVASMDWPEVTKYKCLVSTQSHREEIISNLYTEVKDPLKGIIRGGMIRELLRSFYQETGQ-KPSRIIFYRDGIS 866
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: MEL1_ORYSJ (Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19 Identity = 54/131 (41.22%), Postives = 79/131 (60.31%), Query Frame = 3 Query: 9 NEQYLMNVLLKINAKLGGLNSLLAIEQSKN-LPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLF---KPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 N+QYL NV LKIN K+GG N++L +N +P VS+VPTIIFG DV+H PG +WP +++YR V +Q + E+I+ LF K + G++RELL+ F K +G+ +P +II +R Sbjct: 735 NKQYLENVALKINVKVGGRNTVLERAFIRNGIPFVSEVPTIIFGADVTHPPPGEDSASSIAAVVASMDWPEITKYRGLVSAQPHRQEIIEDLFSVGKDPVKVVNGGMIRELLIAFRKKTGR-RPERIIFYR 864
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.134e-18 Identity = 49/133 (36.84%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFK----PLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 K+N+QY+ NV LKIN K GG N++L +N+PL++ PTII G DV+H PG +WP +++YR V +Q+ + E+I L+K P +G++RE + F +++GQ P +II +R Sbjct: 675 KLNKQYMENVALKINVKTGGRNTVLNDAIRRNIPLITDRPTIIMGADVTHPQPGEDSSPSIAAVVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIREHFIAFRRATGQI-PQRIIFYR 806
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO17_ORYSJ (Protein argonaute 17 OS=Oryza sativa subsp. japonica GN=AGO17 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16 Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFK----PLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 K+N+ YL +V LKINAK+GG N++L LP V PTI+FG V+H PG ++WP +++Y + Q+ E I LFK P +G+++E L+ FY+++ + KP +II +R Sbjct: 552 KMNKWYLASVALKINAKMGGRNTVLVDALEMRLPHVRDTPTIVFGAHVTHPHPGKANSSSIAAVVASQDWPEVTKYAGLISVQACHQESIQGLFKVQDDPERGTTTSGMIKEHLMSFYRAT-KRKPGRIIFYR 683
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO18_ORYSJ (Protein argonaute 18 OS=Oryza sativa subsp. japonica GN=AGO18 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 3 Query: 9 NEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 N QY NV LKINAK GG NS+ + +LP+VSK PTIIFG DV+H +WP +++Y + VR Q+++ E+I L IVRELL + +K + +P Q+I +R Sbjct: 790 NVQYCANVALKINAKAGGRNSVF-LNVEASLPVVSKSPTIIFGADVTHPGSFDESTPSIASVVASADWPEVTKYNSVVRMQASRKEIIQDL---------DSIVRELL-NAFKRDSKMEPKQLIFYR 905
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO11_ORYSJ (Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13 Identity = 40/116 (34.48%), Postives = 66/116 (56.90%), Query Frame = 3 Query: 54 LGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFKPLPNKDD----AGIVRELLVDFYKSSGQTKPSQIIIFR 389 +GG N++L + +PL++ +PT+IFG DV+H G +WP +S+Y+ SV SQS + E+I LF + + + G++REL+ F K++G KP +II +R Sbjct: 581 VGGRNTVLEDALHRRIPLLTDMPTMIFGADVTHPPAGEDSSPSIAAVVASMDWPEVSKYKCSVSSQSHREEIIADLFTEVKDSQNRLVYGGMIRELIESFRKANGSYKPGRIIFYR 696
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO14_ORYSJ (Protein argonaute 14 OS=Oryza sativa subsp. japonica GN=AGO14 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.179e-12 Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = 3 Query: 6 VNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFKPLPNKDDA-----------------GIVRELLVDFYKSSGQTKPSQIIIFR 389 ++ Q+L NV LKIN K GG NS+L Q +P + TIIFG DV+H + G +WP +++Y+A V +Q + E+I LF +A G+ RELL+ FY + + KP +II +R Sbjct: 716 LDRQFLENVSLKINVKAGGRNSVL---QRPLVPGGLENTTIIFGADVTHPASGEDSSASIAAVVASMDWPEITKYKALVSAQPPRQEIIQDLFTMTEVAQNADAPAQKAEGSKKNFICGGMFRELLMSFYSKNAKRKPQRIIFYR 857
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO4_HUMAN (Protein argonaute-4 OS=Homo sapiens GN=EIF2C4 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 49/130 (37.69%), Postives = 72/130 (55.38%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMI-DSLFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 K + Q L N+ LKINAKLGG+N++L Q P V + P I G DV+H G + SRY A+VR Q+++ E+ + L+ +D +VRELL+ FYKS+ + KP++II +R Sbjct: 546 KTSPQTLSNLCLKINAKLGGINNVLVPHQR---PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGH-PSRYCATVRVQTSRQEISQELLYSQEVIQDLTNMVRELLIQFYKST-RFKPTRIIYYR 670 The following BLAST results are available for this feature:
BLAST of CX291634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291634 ID=CX291634; Name=CX291634; organism=Citrus clementina; type=EST; length=702bpback to top |