CX291634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.093e-42 Identity = 86/129 (66.67%), Postives = 101/129 (78.29%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 +VN+QY+ NVLLKINAKLGGLNSLL IE S ++PLVSKVPTII GMDVSHGSPG R WP++S+YRASVRSQS KLEMID LFKP ++D G++RELLVDFY S+G+ KP Q+IIFR Sbjct: 593 RVNDQYITNVLLKINAKLGGLNSLLQIETSPSIPLVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSREWPLVSKYRASVRSQSPKLEMIDGLFKPQGAQEDDGLIRELLVDFYTSTGKRKPDQVIIFR 721
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.929e-39 Identity = 80/129 (62.02%), Postives = 98/129 (75.97%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 K+N+QY NVLLKINAKLGG+NS L++E +P+V++ PT+I GMDVSHGSPG R WP++SRYRASVR+QS K+EMIDSLFKPL + D GI+RELL+DFYK+S Q KP QIIIFR Sbjct: 572 KMNDQYYTNVLLKINAKLGGMNSKLSLEHRHMIPIVNQTPTLILGMDVSHGSPGRADVPSIAAVVGSRCWPLISRYRASVRTQSPKVEMIDSLFKPLDDGKDDGIIRELLLDFYKTSQQRKPKQIIIFR 700
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.575e-39 Identity = 78/129 (60.47%), Postives = 97/129 (75.19%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 +VN+QYL+N+LLKINAKLGG+NSLL IE S ++PLVSK PTII GMDVSHG PG R WP++S+YRASV +QS KLEM+ SLFKP +DD G++RE L+DFY SSG+ KP +I+FR Sbjct: 601 RVNDQYLLNLLLKINAKLGGINSLLQIEASPSIPLVSKTPTIILGMDVSHGQPGQSDRPSIAAVVSSRQWPLISKYRASVHTQSPKLEMMSSLFKPRGTEDD-GLIRESLIDFYTSSGKRKPDHVIVFR 728
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.983e-32 Identity = 71/117 (60.68%), Postives = 88/117 (75.21%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSS 353 K+N+QYL NVLLKINAKLGGLNSLL IE+++ +PL+SK PTII GMDVSHGSPG WP++S+Y+ASV +QS +LEMIDSLFK + N+D I+RE L+DFY SS Sbjct: 582 KINDQYLTNVLLKINAKLGGLNSLLQIERNQAIPLLSKTPTIILGMDVSHGSPGRDDVPSVAAVVSSLEWPLISKYKASVCTQSPRLEMIDSLFKLVGNEDHV-IIRESLMDFYNSS 697
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO1A_ORYSJ (Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.278e-21 Identity = 54/133 (40.60%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFK----PLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 K+++QYL NV LKIN K+GG N++L ++ +PLVS PTIIFG DV+H PG ++WP +++Y V +Q+ + E+I LFK P G++RELL+ F +++GQ KP +II +R Sbjct: 747 KMSKQYLANVALKINVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWKDPQRGTVSGGMIRELLISFKRATGQ-KPQRIIFYR 878
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO1D_ORYSJ (Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.006e-20 Identity = 55/133 (41.35%), Postives = 80/133 (60.15%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFK----PLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 K+N+Q L N+ LKIN K+GG N++L S+ +PLV+ PTIIFG DV+H PG ++WP +++Y V +QS + E+ID L+ P G+VRELL+ F +S+GQ KP +II +R Sbjct: 707 KMNKQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQSHRQELIDDLYNITHDPHRGPICGGMVRELLISFKRSTGQ-KPQRIIFYR 838
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO1B_ORYSJ (Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 2.006e-20 Identity = 53/133 (39.85%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFK----PLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 K+++QYL NV LKIN K+GG N++L ++ +PLVS PTIIFG DV+H PG ++WP +++Y V +Q+ + E+I LFK P G+++ELL+ F +++GQ KP +II +R Sbjct: 784 KMSKQYLANVALKINVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQ-KPQRIIFYR 915
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: PINH_ARATH (Protein PINHEAD OS=Arabidopsis thaliana GN=At5g43810 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20 Identity = 53/133 (39.85%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFK----PLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 K+++QYL NV LKIN K+GG N++L S +PLVS +PTIIFG DV+H G ++WP +++Y V +Q+ + E+I L+K P+ G++R+LL+ F K++GQ KP +II +R Sbjct: 663 KISKQYLANVSLKINVKMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQ-KPLRIIFYR 794
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: AGO1C_ORYSJ (Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20 Identity = 52/133 (39.10%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFK----PLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 K+N+Q L N+ LKIN K+GG N++L S+ +PLV+ PTIIFG DV+H PG ++WP +++Y V +Q+ + E+I+ L+K P G++RELL+ F +S+G+ KP +II +R Sbjct: 676 KMNKQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIEDLYKIWQDPQRGTVSGGMIRELLISFKRSTGE-KPQRIIFYR 807
BLAST of CX291634 vs. ExPASy Swiss-Prot
Match: PNH1_ORYSJ (Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.468e-20 Identity = 54/133 (40.60%), Postives = 80/133 (60.15%), Query Frame = 3 Query: 3 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFK----PLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 389 K+++QYL NV LKIN K+GG N++L S +PLVS +PTIIFG DV+H G ++WP +++Y V +Q+ + E+I L+K P G++RELL+ F K++GQ KP +II +R Sbjct: 658 KISKQYLANVSLKINVKMGGRNTVLLDAISWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPQRGTVTGGMIRELLISFRKATGQ-KPLRIIFYR 789 The following BLAST results are available for this feature:
BLAST of CX291634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291634 ID=CX291634; Name=CX291634; organism=Citrus clementina; type=EST; length=702bpback to top |