CX291653

Overview
NameCX291653
Unique NameCX291653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.060e-61
Identity = 112/220 (50.91%), Postives = 150/220 (68.18%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGW 661
            P+ G K +++ IK G+Y+E + + KK  N+  +GDGR  T+++G  N VDG  TF SAT+AV   GF+A+D+  +NTAGP K QAVALR+  D++  Y C + AYQDTLY +S RQF+ +C I GTVDFIFG AAAV Q C I ARKP  GQ N++TAQ R +    +G   QK  I A+SDL  ++G+  T+LGRPW+ +SR V M+S I D+I  AGW
Sbjct:   67 PENGVKPFVIYIKEGLYKEVIRIGKKKTNLTLVGDGRDLTVLSGDLNGVDGIKTFDSATLAVDESGFMAQDLCIRNTAGPEKRQAVALRISTDMTIIYRCRIDAYQDTLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGW 286          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.172e-60
Identity = 120/240 (50.00%), Postives = 155/240 (64.58%), Query Frame = 2
Query:   14 TKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVD-GSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI-----HARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSD-LKLVQGS---FPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            T ++++RI+ GVY E V V  + KN++FIGDG  +T+ITGS NV   G TTF+SATV V+G+GF+ARD+T +NTAG   HQAVA R  +D S   NC+ L  QDTLY HS RQF+  C I G VDFIFGN+AAV Q+CDI     H++    G  N +TA GR D +Q+TG V     I  T + +K  Q +      +LGRPWKE+SRTV +  ++  LI P GW  W   FAL TL+Y
Sbjct:  317 TVKFVIRIREGVYEETVRVPFEKKNVVFIGDGMGKTVITGSLNVGQPGMTTFESATVGVLGDGFMARDLTIENTAGADAHQAVAFRSDSDFSVLENCEFLGNQDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYY 556          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.444e-58
Identity = 112/236 (47.46%), Postives = 147/236 (62.29%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYF--ALNTLFY 703
            P+ G   +++ +KAG Y ENV + K   N+   GDGR +TII+GS N+VDG  TF ++T A  G+GF+ +D+   NTAGP KHQAVA R  +D S +Y C    YQDTLY HSNRQ++ NC + GTVDFIFG    V Q C I  R+P   Q N +TA+G  + NQNTGI I +  I    ++     +  TYLGRPWK +S+TVIMQS I   ++PAGW  W   +     T+FY
Sbjct:  682 PKKGKTMFVIYVKAGTYVENVLMKKDKWNVFIYGDGRDKTIISGSTNMVDGVRTFNTSTFATEGKGFMMKDMGIINTAGPEKHQAVAFRSDSDRSVYYRCSFDGYQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNV-----TATTYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFY 912          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.069e-57
Identity = 115/234 (49.15%), Postives = 146/234 (62.39%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            PQ   KR+++ IK G+Y E V +     N+  IGDG+  TIIT + +  +   TF +ATVA  G GF+  D+ F+NTAGP+K  AVALRV  D+S  Y C +  YQD LY HS+RQF+  C I GTVDFI GNA AV Q C I AR+P  GQ N++TAQ R   +  +G  IQK  I A+SDL     +  TYLGRPW+ +S   +MQS I DL+ PAGW  WE    L+TL Y
Sbjct:  237 PQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITSNLSASNVRRTFNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRAFKDIYSGFTIQKCNITASSDLDTT--TVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHY 468          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.609e-57
Identity = 114/234 (48.72%), Postives = 145/234 (61.97%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            PQ   KR+I+ IK G+Y E V +     N+  IGDG+  TIITG+ +  +   TF +AT A  G+GF+  D+ F+NT GP+K  AVALRV  D+S  Y C +  YQD LY H +RQF+  C I GTVDFI GNAAAV Q C I AR+PN GQ N +TAQ R   +  +G  IQ   I A+SDL     +  TYLGRPW+ +S   ++QS I DL+ PAGW  WE    L+TL Y
Sbjct:  237 PQHSHKRFIIYIKTGIYDEIVAIENTKPNLTLIGDGQDSTIITGNLSASNVRRTFYTATFASNGKGFIGVDMCFRNTVGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHIDRQFYRECFITGTVDFICGNAAAVFQFCQIVARQPNMGQSNFITAQSRETKDDKSGFSIQNCNITASSDLD--TATVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLHY 468          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.341e-56
Identity = 111/234 (47.44%), Postives = 145/234 (61.97%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            PQ   KR+++ IK G+Y E V +     N+  IGDG+  TIITG+ +  +   T+ +ATVA  G GF+  D+ F+NTAGP+K  AVALRV  D+S  Y C +  YQD LY HS+RQF+  C I GTVDFI GNA AV Q C I AR+P  GQ N++TAQ R   +  +G  IQ   I  +SDL     +  TYLGRPW+ +S   ++QS I DL+ PAGW  W+    L+TL Y
Sbjct:  210 PQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITGNLSASNVRRTYNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDLD--TATVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHY 441          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.388e-53
Identity = 105/216 (48.61%), Postives = 136/216 (62.96%), Query Frame = 2
Query:   23 YILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW 670
            +++ +KAGVY+E V V K+   +  IGDG T+T  TGS N  DG  T+ +AT  V G  F+A+DI F+NTAG  KHQAVALRV AD + FYNC M  +QDTLYV S RQF+ +C I+GT+DF+FG    V QNC +  R P  GQ+ +VTA GR   N  + +V Q S       L  V     +YLGRPWK+YS+ VIM S+I  +  P G+  W
Sbjct:  160 FVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYNTATFGVNGANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPW 374          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.887e-53
Identity = 110/227 (48.46%), Postives = 144/227 (63.44%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVV--DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQG-RTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWE 673
            P+    R I+ IKAG+YRE V + KK  NI   GDG  +T+I+ +R+V    G+TT  SATV V  EGF+A+ + F+NTAGP  HQA A+RV  D +  +NC    YQDTLYV++ RQF+ NC+++GTVDFIFG +A V+QN  I  RK + GQ N VTA G         GIV+Q  RI     L   + +  TYLGRPWK++S TVIM + + DLI P GW  W+
Sbjct:  298 PENNRGRCIIYIKAGLYREQVIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWD 524          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.994e-53
Identity = 110/227 (48.46%), Postives = 144/227 (63.44%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV--VDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQ-NTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWE 673
            P+    R I+ IKAGVY+E V + KK  N+   GDG T+TIIT  R+V    G+TT  S TV V  EGF+A+ I FQNTAGP  HQAVA RV  D +  +NC    YQDTLYV++ RQF+ N +++GTVDFIFG +A V+QN  I  RK + GQ N VTA G         GIV+   RI A  +L+  + +  +YLGRPWK ++ T ++ + I DLI P GW+EW+
Sbjct:  294 PEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQ 520          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 8.994e-53
Identity = 111/227 (48.90%), Postives = 143/227 (63.00%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVV--DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQG-RTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWE 673
            P     R I+ IKAG+Y E V + KK  NI   GDG T+TIIT  R+V    G+TT  S TV V  EGF+A+ I F+NTAGP  HQAVALRV  D +  +NC    YQDTLYV++ RQF+ N +++GTVDFIFG +A V+QN  I  RK + GQ N VTA G         GIV+   RI    +L+  + +  +YLGRPWK+++ TVI+ + I DLI P GW EW+
Sbjct:  298 PDKNPGRCIIHIKAGIYNEQVRIPKKKNNIFMFGDGATQTIITFDRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPLGHQAVALRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQ 524          
The following BLAST results are available for this feature:
BLAST of CX291653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PME56_ARATH1.060e-6150.91Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]
PME64_ARATH1.172e-6050.00Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME26_ARATH5.444e-5847.46Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME19_ARATH2.069e-5749.15Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME42_ARATH4.609e-5748.72Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME30_ARATH1.341e-5647.44Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME_MEDSA1.388e-5348.61Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME4_ARATH6.887e-5348.46Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]
PME_BRANA8.994e-5348.46Probable pectinesterase/pectinesterase inhibitor O... [more]
PME37_ARATH8.994e-5348.90Probable pectinesterase/pectinesterase inhibitor V... [more]

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Properties
Property NameValue
Genbank descriptionC03011G02SK OF2 Citrus clementina cDNA clone C03011G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291653 ID=CX291653; Name=CX291653; organism=Citrus clementina; type=EST; length=703bp
TCCTCAGGGAGGCACTAAGCGGTATATTCTTAGGATTAAAGCTGGTGTTT
ATCGGGAAAATGTTGAGGTGACAAAGAAGCATAAAAATATAATGTTCATC
GGTGACGGAAGGACTAGAACTATCATCACAGGAAGTAGAAATGTGGTTGA
TGGAAGCACAACTTTCAAGTCTGCTACAGTTGCTGTTGTTGGTGAAGGAT
TCTTGGCCCGAGACATTACATTCCAAAACACAGCAGGCCCCTCAAAGCAC
CAGGCAGTGGCACTGCGAGTGGGAGCTGACCTTTCAGCATTTTACAATTG
CGATATGTTAGCTTACCAAGACACACTCTACGTCCACTCGAACCGCCAGT
TCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTTCATTTTTGGTAAT
GCTGCAGCCGTGTTACAAAATTGTGACATCCATGCACGAAAGCCCAATTC
CGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGACTGACCCTAACCAAA
ACACCGGCATTGTCATTCAAAAATCTAGGATTGGTGCCACCTCCGATTTA
AAACTGGTTCAGGGTAGTTTCCCGACGTACCTCGGCAGGCCCTGGAAGGA
GTACTCGAGGACGGTGATCATGCAGTCGTCGATTACTGACTTGATCCACC
CTGCCGGGTGGCACGAGTGGGAATGGTACTTCGCGTTGAACACATTGTTT
TAC
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