CX291653

Overview
NameCX291653
Unique NameCX291653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 464.922 bits (1195), Expect = 1.832e-130
Identity = 228/234 (97.44%), Postives = 230/234 (98.29%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            PQGGTKRYI+RIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSAT AVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLK VQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW+  FALNTLFY
Sbjct:  295 PQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATAAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFY 528          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 463.381 bits (1191), Expect = 5.332e-130
Identity = 227/234 (97.01%), Postives = 230/234 (98.29%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            PQGGTKRYI+RIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGR DPNQNTGIVIQKSRIGATSDLK VQGSFPTYLGRPWKEYSRTVIMQSSITD+IHPAGWHEW+  FALNTLFY
Sbjct:  295 PQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFY 528          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 410.609 bits (1054), Expect = 4.101e-114
Identity = 200/234 (85.47%), Postives = 213/234 (91.03%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            P+   KRY++ IKAGVYRENVEV KK KNIMF+GDGRTRTIITGSRNVVDGSTTF SATVA VGE FLARDITFQNTAGPSKHQAVALRVG+D SAFYNCDMLAYQDTLYVHSNRQFFV CLIAGTVDFIFGNAA VLQ+CDIHAR+PNSGQKNMVTAQGRTDPNQNTGIVIQK RIGATSDL+ V+GSFPTYLGRPWKEYS+TVIMQS+I+D+I P GW EW   FALNTL Y
Sbjct:  303 PENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGRTRTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTY 536          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 1.783e-109
Identity = 190/234 (81.20%), Postives = 211/234 (90.17%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            P+    RY++RIKAGVYRENV+V KK KNIMF+GDGRT TIIT S+NV DGSTTF SATVA VG GFLARDITFQNTAG +KHQAVALRVG+DLSAFY CD+LAYQD+LYVHSNRQFF+NC IAGTVDFIFGNAA VLQ+CDIHAR+P SGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDL+ VQ SFPTYLGRPWKEYSRTV+MQSSIT++I+PAGW  W+  FAL+TL+Y
Sbjct:   30 PEDSKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYY 263          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 391.349 bits (1004), Expect = 2.575e-108
Identity = 190/234 (81.20%), Postives = 206/234 (88.03%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            P+   KR+++ IKAGVYRENVEVTKK  NIMF+GDGR +TIITGSRNVVDGSTTF SATVA VGE FLARDITFQNTAGPSKHQAVALRVG+D SAFY CDM AYQDTLYVHSNRQFFV C I GTVDFIFGNAAAVLQ+CDI+AR+PNSGQKNMVTAQGR+DPNQNTGIVIQ  RIG TSDL  V+G+FPTYLGRPWKEYSRTVIMQS I+D+I P GWHEW   FAL+TL Y
Sbjct:  298 PEKSNKRFVIHIKAGVYRENVEVTKKKTNIMFLGDGRGKTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFALDTLTY 531          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 4.856e-107
Identity = 190/234 (81.20%), Postives = 205/234 (87.61%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            P+  +KRY++RIKAGVYRENV+V KK  NIMF+GDG++ TIIT SRNV DGSTTF SATV  V    LARDITFQNTAG SKHQAVAL VG+DLSAFY CDMLAYQDTLYVHSNRQFFV CL+AGTVDFIFGN AAV Q+CDIHAR+P SGQKNMVTAQGRTDPNQNTGIVIQK RIGATSDL+ VQ SFPTYLGRPWKEYSRTVIMQSSITD+I PAGWHEW   FAL+TLFY
Sbjct:  294 PEKSSKRYVIRIKAGVYRENVDVPKKKTNIMFMGDGKSNTIITASRNVQDGSTTFHSATVVRVAGKVLARDITFQNTAGASKHQAVALCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFY 527          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.427e-82
Identity = 152/233 (65.24%), Postives = 181/233 (77.68%), Query Frame = 2
Query:    5 QGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            + G  RY++ IKAG Y EN+EV  K KNIMF+GDG  +TIITGS++V  G+TTFKSATVAVVG+ F+ARDIT +NTAGP+ HQAVALR G+DLS FY C    YQDTLYVHS RQF+  C I GTVDFIFGNAA VLQNC+I ARKP   + N +TAQGRTDPNQ+TGI+I   R+ A SDLK VQ S  T+LGRPWK+YSRTV +++ +  LI+PAGW EW   FALNTL+Y
Sbjct:  225 RAGGSRYVIYIKAGTYNENIEV--KLKNIMFVGDGIGKTIITGSKSVGGGATTFKSATVAVVGDNFIARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKP-PNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYY 454          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 7.061e-82
Identity = 147/234 (62.82%), Postives = 180/234 (76.92%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            P+    RY++ +K GVY+E +++ KK KN+M +GDG+  TIITGS NV+DGSTTF+SATVA  G+GF+A+DI FQNTAGP+KHQAVALRV AD +    C + AYQDTLY H+ RQF+ +  I GTVDFIFGN+A V QNCDI AR P +GQKNM+TAQGR D NQNT I IQK +I A+SDL  V+GS  T+LGRPWK YSRTVIMQS I + I PAGW  W+  FAL+TL+Y
Sbjct:  268 PENSNTRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKDATIITGSLNVIDGSTTFRSATVAANGDGFMAQDIWFQNTAGPAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYY 501          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.054e-81
Identity = 148/230 (64.35%), Postives = 175/230 (76.09%), Query Frame = 2
Query:   14 TKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            T R+++ IK G Y E V+V KK  N+MFIGDG  +T I G+R+VVDG TTF+S+TVAVVG GF+AR I+F+N AGPSKHQAVALR GAD SAFY C  + YQDTLYVHS RQF+  C + GT+DFIFGNAAAVLQ C+++ARKPN  QKN+ TAQGR DPNQNTGI I   ++ A +DL  V  SF TYLGRPWKEYSRTV + S +  LI PAGW EW   FAL TL+Y
Sbjct:   35 TARFVIYIKEGAYFEYVDVDKKKTNLMFIGDGIGKTWIKGNRSVVDGWTTFRSSTVAVVGTGFIARGISFENYAGPSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQKNIFTAQGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYY 264          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 299.286 bits (765), Expect = 1.332e-80
Identity = 148/231 (64.07%), Postives = 181/231 (78.35%), Query Frame = 2
Query:   11 GTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            G+ R+++ +K GVY EN+E+ KK  N+M  GDG  +TIITGS++V  G+TTF SATVA VG+GF+AR ITF+NTAG S  QAVALR G+DLS FY C   AYQDTLYVHSNRQF+ +C + GTVDFIFGNAAAVLQNC+I AR+P S + N +TAQGR+DPNQNTGI+I  SR+ A SDL+ V GS  TYLGRPW++YSRTV M++S+  LI P GW EW+  FAL TLFY
Sbjct:  229 GSGRFVIYVKQGVYSENLEIRKK--NVMLRGDGIGKTIITGSKSVGGGTTTFNSATVAAVGDGFIARGITFRNTAGASNEQAVALRSGSDLSVFYQCSFEAYQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPRS-KTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFY 456          
The following BLAST results are available for this feature:
BLAST of CX291653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PME1_CITSI1.832e-13097.44Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME3_CITSI5.332e-13097.01Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME3_ARATH4.101e-11485.47Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME_DAUCA1.783e-10981.20Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME2_ARATH2.575e-10881.20Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PMEU1_SOLLC4.856e-10781.20Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME2_CITSI2.427e-8265.24Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME18_ARATH7.061e-8262.82Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME_ACTDE2.054e-8164.35Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME17_ARATH1.332e-8064.07Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionC03011G02SK OF2 Citrus clementina cDNA clone C03011G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291653 ID=CX291653; Name=CX291653; organism=Citrus clementina; type=EST; length=703bp
TCCTCAGGGAGGCACTAAGCGGTATATTCTTAGGATTAAAGCTGGTGTTT
ATCGGGAAAATGTTGAGGTGACAAAGAAGCATAAAAATATAATGTTCATC
GGTGACGGAAGGACTAGAACTATCATCACAGGAAGTAGAAATGTGGTTGA
TGGAAGCACAACTTTCAAGTCTGCTACAGTTGCTGTTGTTGGTGAAGGAT
TCTTGGCCCGAGACATTACATTCCAAAACACAGCAGGCCCCTCAAAGCAC
CAGGCAGTGGCACTGCGAGTGGGAGCTGACCTTTCAGCATTTTACAATTG
CGATATGTTAGCTTACCAAGACACACTCTACGTCCACTCGAACCGCCAGT
TCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTTCATTTTTGGTAAT
GCTGCAGCCGTGTTACAAAATTGTGACATCCATGCACGAAAGCCCAATTC
CGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGACTGACCCTAACCAAA
ACACCGGCATTGTCATTCAAAAATCTAGGATTGGTGCCACCTCCGATTTA
AAACTGGTTCAGGGTAGTTTCCCGACGTACCTCGGCAGGCCCTGGAAGGA
GTACTCGAGGACGGTGATCATGCAGTCGTCGATTACTGACTTGATCCACC
CTGCCGGGTGGCACGAGTGGGAATGGTACTTCGCGTTGAACACATTGTTT
TAC
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