CX291653

Overview
NameCX291653
Unique NameCX291653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 5.830e-52
Identity = 110/227 (48.46%), Postives = 142/227 (62.56%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVV--DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDP-NQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWE 673
            P+    R I+ IKAG+YRE V + KK  NI   GDG  +T+I+ +R+V    G+TT  S TV V  EGF+A+ I F+NTAGP  HQAVA+RV  D +  +NC    YQDTLYV++ RQF+ N +++GTVDFIFG +A V+QN  I  RK N GQ N VTA G         GIV+Q  RI     L   +    +YLGRPWK++S TVI+ S I D+I P GW  W+
Sbjct:  305 PEKNPGRCIIHIKAGIYREQVIIPKKKNNIFMFGDGARKTVISYNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWD 531          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.779e-51
Identity = 108/227 (47.58%), Postives = 144/227 (63.44%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV--VDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQ-NTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWE 673
            P+    R I+ IKAGVY+E V + KK  N+   GDG T+TIIT  R+V    G+TT  S TV V  EGF+A+ I FQNTAGP  +QAVA RV  D +  +NC    YQDTLYV++ RQF+ N +++GTVDFI G +A V+QN  I  RK + GQ N VTA G+        GIV+   RI A  +L+  + +  +YLGRPWK ++ T ++ + I DLI P GW+EW+
Sbjct:  281 PEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQ 507          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.670e-48
Identity = 97/212 (45.75%), Postives = 133/212 (62.74%), Query Frame = 2
Query:   41 AGVYRENVE-VTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK-NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW 670
            +G YR  +E VT  H      G+G+  T+I G  +   G++   +AT+ V G+GF+ARDI  +N AGP  HQA+AL + +D S  Y C +  YQDTLY  + RQF+  C I GT+DFIFGNAAAV Q+C+I  R+P+  +  N++ A GRTD  QNTG  +   RI   SDL  V+  + +YLGRPW++YSR ++M+S I D I   GW  W
Sbjct:  237 SGDYRTVMEAVTAAH------GNGKDLTVIVGDDSATGGTSVPDTATMTVTGDGFIARDIGIKNIAGPRGHQAIALSITSDQSVLYRCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQRQNTGFALHSCRIRTDSDLSPVKHKYSSYLGRPWRKYSRAIVMESYIDDAIAEGGWAGW 442          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.334e-39
Identity = 89/233 (38.20%), Postives = 125/233 (53.65%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV----------VDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW 670
            P G T R ++R+  G+YR+ V V K+   I F G     T++T +             V G+ TF   +V V GE F+A +ITF+N+A     QAVA+RV AD  AFYNC  L +QDTLY+H  +Q+  +C I G+VDFIFGN+ A+L++C IH +      +  +TAQ R    ++TG V  +  I           S   YLGRPW  + R V+  + +   I   GWH W
Sbjct:   28 PLGNTCRTVIRLSPGIYRQPVYVPKRKNFITFAGISPEITVLTWNNTASKIEHHQASRVIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCK-----SQGFITAQSRKSSQESTGYVFLRCVITGNGQ------SGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNW 249          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.160e-34
Identity = 87/239 (36.40%), Postives = 125/239 (52.30%), Query Frame = 2
Query:   20 RYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST------TFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            R ++++ AGVY+E V +      I   G+G  +T +          +      T+ SA+ AV    F+A++ITF+NT      G    QAVALRV AD +AF+ C ML  QDTLY H  R ++ +C I G+VDFIFGNA ++ + C +HA     G    VTAQGR+   ++TG    K ++  T  L         YLGR W  +SR V   + + ++I P GW+ W       T+FY
Sbjct:  113 RVVIKVHAGVYKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIADKLG---AVTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFY 339          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33
Identity = 79/227 (34.80%), Postives = 120/227 (52.86%), Query Frame = 2
Query:   23 YILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            Y + +K G+YRE V +  +   I   G   + T +  S    DG    +S T+ +    F+ R +T QN  G +  +AVALRV AD +AFY C + +YQDTL   +   +F NC I G  DFI G+A+++ + C +H+  PN+G    +TAQ RT   + +G      ++          GS  T+LGRPW  YSR V   S  ++++ P GW++W      NT++Y
Sbjct:   81 YFIWVKPGIYREKVVIPAEKPYITLSGTQASNTFLIWS----DGEDILESPTLTIFASDFVCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPNNGS---ITAQMRTSATEKSGFTFLGCKL---------TGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYY 290          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 3.553e-33
Identity = 86/239 (35.98%), Postives = 125/239 (52.30%), Query Frame = 2
Query:   17 KRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI--HARKPNSGQK---NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            +R ++ I +G+Y E V + K   NI   G G   T I  +      + TF  ATV V G  F+A++I+F N A     G    QAVA+R+  D SAF  C     QDTL+    R +F +C I G++DFIFGNA ++ Q+C I   A + + G K     VTA GR+  ++N+G       IG T  +         +LGR W+ YSR V + +++TD+I P GW+ +       T+FY
Sbjct:  117 RRNVIWINSGMYYEKVVIPKTKPNITLQGQGFDITAIAWNDTAYSANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTIGGTGHV---------WLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFY 346          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.547e-31
Identity = 85/236 (36.02%), Postives = 117/236 (49.58%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTR--TIITGSRNVVDGST------TFKSATVAVVGEGFLARDITFQNT----AGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWE 673
            P   ++R  + I  G+YRE V V K    I FIG+      T+I+ S    D         T+++A+V++  + F A  ITF+NT    AG    QAVALR+  D + FY   +L  QDTL+  +   +F  C I G VDFIFGNA ++ Q+CDIH+     G    + A  R    ++TG       I  T  +         YLGR W  YSRTV     I D+I P GW +W+
Sbjct:  103 PDSNSQRVKIFILPGIYREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHSTAKRYG---AIAAHHRDSETEDTGFSFVNCDISGTGQI---------YLGRAWGNYSRTVYSNCFIADIITPVGWSDWK 326          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.272e-30
Identity = 78/236 (33.05%), Postives = 116/236 (49.15%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAG-PSKHQ--------AVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIH--ARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEW 676
            P   T  + + +KAG+YRE + + +K   I+ +G G+  T +       D ++  +S T A + +  + + ITF N+   PS  +        AVA  +G D SAFY+      QDTL+    R +F  C I G VDFI G+  ++ Q+C I     +   G    +TAQGRT+ N   G V             LV G    YLGR W+ YSR +   S++TD++ P GW EW +
Sbjct:   50 PINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRSTRVEWD----DHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINC---------LVHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNY 272          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.383e-29
Identity = 78/232 (33.62%), Postives = 119/232 (51.29%), Query Frame = 2
Query:   26 ILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHA-RKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            ++ I  G+YRE   V +   N++  G G +RT I  +      + TF S +VAV GE F A +I+F+NTA     G    QAVAL+V  D +AFY C     QDTL     R FF  C I G++DFIFGN  ++ ++C +H+  K N+     +TA G+      TG V    +I          GS   +LGR W+ Y+R +  ++ ++ ++   GW++        T++Y
Sbjct:   71 LILIDFGIYRERFIVHENKNNLVVQGMGYSRTSIEWNNTTASSNGTFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSIAKENT--IGCITANGKDTLKDRTGFVFVNCKI---------TGSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYY 291          
The following BLAST results are available for this feature:
BLAST of CX291653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PME5_ARATH5.830e-5248.46Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME_BRACM3.779e-5147.58Pectinesterase/pectinesterase inhibitor (Fragment)... [more]
PME54_ARATH6.670e-4845.75Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME31_ARATH4.334e-3938.20Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME53_ARATH7.160e-3436.40Probable pectinesterase 53 OS=Arabidopsis thaliana... [more]
PME11_ARATH1.221e-3334.80Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]
PME8_ARATH3.553e-3335.98Probable pectinesterase 8 OS=Arabidopsis thaliana ... [more]
PME62_ARATH2.547e-3136.02Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT... [more]
PME55_ARATH6.272e-3033.05Probable pectinesterase 55 OS=Arabidopsis thaliana... [more]
PME14_ARATH2.383e-2933.62Putative pectinesterase 14 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionC03011G02SK OF2 Citrus clementina cDNA clone C03011G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291653 ID=CX291653; Name=CX291653; organism=Citrus clementina; type=EST; length=703bp
TCCTCAGGGAGGCACTAAGCGGTATATTCTTAGGATTAAAGCTGGTGTTT
ATCGGGAAAATGTTGAGGTGACAAAGAAGCATAAAAATATAATGTTCATC
GGTGACGGAAGGACTAGAACTATCATCACAGGAAGTAGAAATGTGGTTGA
TGGAAGCACAACTTTCAAGTCTGCTACAGTTGCTGTTGTTGGTGAAGGAT
TCTTGGCCCGAGACATTACATTCCAAAACACAGCAGGCCCCTCAAAGCAC
CAGGCAGTGGCACTGCGAGTGGGAGCTGACCTTTCAGCATTTTACAATTG
CGATATGTTAGCTTACCAAGACACACTCTACGTCCACTCGAACCGCCAGT
TCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTTCATTTTTGGTAAT
GCTGCAGCCGTGTTACAAAATTGTGACATCCATGCACGAAAGCCCAATTC
CGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGACTGACCCTAACCAAA
ACACCGGCATTGTCATTCAAAAATCTAGGATTGGTGCCACCTCCGATTTA
AAACTGGTTCAGGGTAGTTTCCCGACGTACCTCGGCAGGCCCTGGAAGGA
GTACTCGAGGACGGTGATCATGCAGTCGTCGATTACTGACTTGATCCACC
CTGCCGGGTGGCACGAGTGGGAATGGTACTTCGCGTTGAACACATTGTTT
TAC
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