CX291653

Overview
NameCX291653
Unique NameCX291653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29
Identity = 76/238 (31.93%), Postives = 118/238 (49.58%), Query Frame = 2
Query:   23 YILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAG-PSKHQ--------AVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIH--ARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            + + +KAG+YRE +++  +   I+ +G G+  T +       D  +  +S T + + +  + + ITF N+   PSK +        AVA  +G D SAFY+      QDTL+    R +F  C I G VDFIFG   ++ Q+C I     +   G    +TAQGRT+P    G +             LV G+   +LGRPW+ YSR +   S++TD++ P GW  W +    N L +
Sbjct:   62 FFINVKAGLYREKIKIPYEKPFIVLVGAGKRLTRVEWD----DHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINC---------LVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVF 286          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.935e-29
Identity = 75/230 (32.61%), Postives = 110/230 (47.83%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIH--ARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW 670
            P   + + ++ + +G YRE V V +   N++  G G   T I  +        T  S +  V    F A +I+F+N A     G +  QAVALR+  D +AFY C     QDTL     R FF  C I G++DFIFGN  ++ Q+C I+  A+   SG    +TAQGR   ++ +G      +I          GS    LGR W  Y+  V   + ++ +I P GW+ W
Sbjct:  112 PDLSSSKTLIIVNSGSYREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAGNTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKI---------DGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNW 332          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27
Identity = 78/235 (33.19%), Postives = 109/235 (46.38%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST------TFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWE 673
            P+   K   ++I  G YRE V V      I F G GR  T I       D         T+++A+V V    F AR+I+F NTA     G    QAVA R+  D + F  C     QDTL   + R +F  C I G++DFIFGN  ++ ++C++H+     G    + A GRT P + TG      R         V G+ P Y+GR   +YSR V   +    L+   GW +W+
Sbjct:   82 PKNNNKSITIKIAPGFYREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIASRFGS---IAAHGRTCPEEKTGFAFVGCR---------VTGTGPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWD 304          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.477e-27
Identity = 74/226 (32.74%), Postives = 110/226 (48.67%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGP----SKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHE 667
            P G   R I+++  GVY E V +      I  +G     T++T         T  +SAT+ V  E F A  +T +NTA      S+ QA+A+R+ AD +AFY+C    +QDTL       FF +C I GT DFIFG  A++  N  +HA     G + ++TAQGR    +  G      ++  T            YLGR W  + + V   + +T +++P+GW E
Sbjct:   88 PTGNKNRVIIKLAPGVYNEKVTIDIARPFITLLGQPGAETVLTYHGTAAQYGTV-ESATLIVWAEYFQAAHLTIKNTAPMPKPGSQGQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHA--VGDGLR-VITAQGRQSATEQNGYTFVHCKVTGTGT--------GIYLGRSWMSHPKVVYAFTEMTSVVNPSGWRE 301          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.446e-26
Identity = 68/176 (38.64%), Postives = 95/176 (53.98%), Query Frame = 2
Query:  149 DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFG-NAAAVLQNCDIH-ARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW 670
            D + TF++  V     G    ++   NT G + HQA+AL   AD   +Y C+   YQDTL   +  Q ++N  I G VDFIFG +A A  QN DI     P S     +TA GR+     +  VI KS + A     + +G++  YLGRPW EY+R V  Q+S+T++I+  GW EW
Sbjct:  110 DLTATFRNKAV-----GSQVYNLNIANTCGQACHQALALSAWADQQGYYGCNFTGYQDTLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQNVDIRVVEGPTSAS---ITANGRSSETDTSYYVINKSTVAAKEGDDVAEGTY--YLGRPWSEYARVVFQQTSMTNVINSLGWTEW 275          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.207e-26
Identity = 62/143 (43.36%), Postives = 81/143 (56.64%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI 430
            PQ   KR+++ IK  +Y E V +     N+  I DG+  TIIT + +  +   TF +AT A  G+GF+  D+ F+NT  P K   V LRV  D+S  Y C +  YQD LY H NRQ +    +  TVDFI GNAAAV Q C I
Sbjct:   99 PQHSQKRFVIYIKTSIYVEIVVIGNMKSNLTLIADGQDSTIITFNLSSSNSKRTFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQI 241          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.495e-26
Identity = 70/240 (29.17%), Postives = 118/240 (49.17%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAG-----PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK-NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            P G +   I+ ++ G+Y+E V + +    I   G+G+ +T+I  S++ VD      SAT  V    F+A  I+ +N A       S++Q+VA  V AD  AFY+C   +  +TL+ +  R ++  C I G++DFIFG A ++  NC+I        +    +TA  R    + TG V  + +         V G    YLGR    YSR +  ++ ++  + P GW  W ++ +   L++
Sbjct:   67 PVGNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGKGKTVIESSQSSVDNVA---SATFKVEANHFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPYGSITAHHRESAEEKTGYVFIRGK---------VYGIDEVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYH 294          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25
Identity = 72/228 (31.58%), Postives = 110/228 (48.25%), Query Frame = 2
Query:   14 TKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTI-------ITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFG-NAAAVLQNCDIHARK-PNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW 670
            T+   + I+ G Y E V +      ++  G     T        IT +  + D     ++AT+    EG    ++   NT G + HQA+A+   A    +Y C    YQDTL   +  Q +    I G VDFIFG +A A    CDI   + P+S     +TA GR+  + ++  VI KS + A     +  G++  YLGRPW +Y+R    ++S+TD+I+  GW EW
Sbjct:   52 TETQTIFIEEGSYDEQVYIPALSGKLIVYGQTEDTTTYTSNLVNITHAIALADVDNDDETATLRNYAEGSAIYNLNIANTCGQACHQALAVSAYASEQGYYACQFTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLEGPSSAS---ITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTY--YLGRPWSQYARVCFQKTSMTDVINHLGWTEW 274          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.146e-23
Identity = 67/203 (33.00%), Postives = 99/203 (48.77%), Query Frame = 2
Query:  101 GDGRTRTIIT-GSRNVVDGSTTFKSATVAVVGEGFLARD-------ITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK---NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEW 676
            G+G+  T IT       D S+TF S    +V       +       +T  N        AVA+ V  D SAFYNCD L  QDT++ +  R  F NC I G +DFIFG+  +V ++C I+A       K     +TAQGR+  +  +G V  +           V GS   YLGR +  +SR + +Q+ ++ ++HP GW+ W +
Sbjct:   42 GEGQRVTTITYNGHAATDVSSTFTSYPSHIVVRNLSIMNTYNRLTSLTKANGMSWDIKPAVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGS---------VSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHY 235          
BLAST of CX291653 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22
Identity = 67/243 (27.57%), Postives = 114/243 (46.91%), Query Frame = 2
Query:    2 PQGGTKRYILRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST----TFKSATVAVVGEGFLARDITFQNTA----GPSKH-QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWEWYFALNTLFY 703
            P G TKR I+++  G YRE V + +    I  +G      +IT      DG+     T  SA++ ++ + F+A +I  +NTA    G +K  QA+++R+  + +AFYNC    +QDT+   +   FF +C + GT DFIFG+  ++     +H          ++ A       + +G      ++  T            YLGR W  + + V   + +T +++P GW E +      T+FY
Sbjct:   87 PAGNTKRVIIKMAHGEYREKVTIDRNKPFITLMGQPNAMPVIT-----YDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGI---RVIAAHAGKSAEEKSGYSFVHCKVTGTGG--------GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFY 313          
The following BLAST results are available for this feature:
BLAST of CX291653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PME29_ARATH4.066e-2931.93Probable pectinesterase 29 OS=Arabidopsis thaliana... [more]
PME15_ARATH6.935e-2932.61Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]
PME68_ARATH2.231e-2733.19Probable pectinesterase 68 OS=Arabidopsis thaliana... [more]
PME50_ARATH8.477e-2732.74Probable pectinesterase 50 OS=Arabidopsis thaliana... [more]
PME_ASPAC1.446e-2638.64Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE... [more]
PME57_ARATH4.207e-2643.36Putative pectinesterase 57 OS=Arabidopsis thaliana... [more]
PME67_ARATH5.495e-2629.17Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]
PME_ASPTU7.935e-2531.58Pectinesterase OS=Aspergillus tubingensis GN=pme1 ... [more]
PME52_ARATH1.146e-2333.00Putative pectinesterase 52 OS=Arabidopsis thaliana... [more]
PME48_ARATH1.267e-2227.57Probable pectinesterase 48 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionC03011G02SK OF2 Citrus clementina cDNA clone C03011G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291653 ID=CX291653; Name=CX291653; organism=Citrus clementina; type=EST; length=703bp
TCCTCAGGGAGGCACTAAGCGGTATATTCTTAGGATTAAAGCTGGTGTTT
ATCGGGAAAATGTTGAGGTGACAAAGAAGCATAAAAATATAATGTTCATC
GGTGACGGAAGGACTAGAACTATCATCACAGGAAGTAGAAATGTGGTTGA
TGGAAGCACAACTTTCAAGTCTGCTACAGTTGCTGTTGTTGGTGAAGGAT
TCTTGGCCCGAGACATTACATTCCAAAACACAGCAGGCCCCTCAAAGCAC
CAGGCAGTGGCACTGCGAGTGGGAGCTGACCTTTCAGCATTTTACAATTG
CGATATGTTAGCTTACCAAGACACACTCTACGTCCACTCGAACCGCCAGT
TCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTTCATTTTTGGTAAT
GCTGCAGCCGTGTTACAAAATTGTGACATCCATGCACGAAAGCCCAATTC
CGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGACTGACCCTAACCAAA
ACACCGGCATTGTCATTCAAAAATCTAGGATTGGTGCCACCTCCGATTTA
AAACTGGTTCAGGGTAGTTTCCCGACGTACCTCGGCAGGCCCTGGAAGGA
GTACTCGAGGACGGTGATCATGCAGTCGTCGATTACTGACTTGATCCACC
CTGCCGGGTGGCACGAGTGGGAATGGTACTTCGCGTTGAACACATTGTTT
TAC
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