CX291662

Overview
NameCX291662
Unique NameCX291662
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length762
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_CHLT2 (Tyrosyl-tRNA synthetase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=tyrS PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.383e-33
Identity = 80/176 (45.45%), Postives = 112/176 (63.64%), Query Frame = 3
Query:  240 VVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGS--SNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            ++D L++RG+L++ +S  L SL       +  Y GFDPTA SLH+G+ +GI  L      G   VAL+GGAT  +GDPSGKS+ER  LD    +  +L  SK  +    S    + I+NN DW    S +DFL+ VG+  R+G+M+AK+ VK+R+ SE+G+S+TEFSY LLQ YDF
Sbjct:    4 LIDNLKKRGILDN-SSAGLESLTVP----VSAYLGFDPTAPSLHIGHWIGICFLRRLAAYGITPVALVGGATGMIGDPSGKSVERSLLD----QAQVLDNSKKIAAALASYLPGIRIVNNADWLGSLSMVDFLRDVGKHFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDF 170          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRZT (Tyrosyl-tRNA synthetase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=tyrS PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.112e-33
Identity = 76/179 (42.46%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLE---KNILG-ISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            ++ D L+ RGL+   T +     A   E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     DT++   K+I G +S+      G +  V++NNYDW+   SF+DFL+ +G++  +  M++KESVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 HIFDELKERGLIFQTTDEEALRKALE-EGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRZP (Tyrosyl-tRNA synthetase OS=Streptococcus pneumoniae (strain P1031) GN=tyrS PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.112e-33
Identity = 76/179 (42.46%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLE---KNILG-ISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            ++ D L+ RGL+   T +     A   E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     DT++   K+I G +S+      G +  V++NNYDW+   SF+DFL+ +G++  +  M++KESVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 HIFDELKERGLIFQTTDEEALRKALE-EGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRZJ (Tyrosyl-tRNA synthetase OS=Streptococcus pneumoniae (strain JJA) GN=tyrS PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.112e-33
Identity = 76/179 (42.46%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLE---KNILG-ISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            ++ D L+ RGL+   T +     A   E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     DT++   K+I G +S+      G +  V++NNYDW+   SF+DFL+ +G++  +  M++KESVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 HIFDELKERGLIFQTTDEEALRKALE-EGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRR6 (Tyrosyl-tRNA synthetase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=tyrS PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.112e-33
Identity = 76/179 (42.46%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLE---KNILG-ISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            ++ D L+ RGL+   T +     A   E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     DT++   K+I G +S+      G +  V++NNYDW+   SF+DFL+ +G++  +  M++KESVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 HIFDELKERGLIFQTTDEEALRKALE-EGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRPS (Tyrosyl-tRNA synthetase OS=Streptococcus pneumoniae (strain CGSP14) GN=tyrS PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.112e-33
Identity = 76/179 (42.46%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLE---KNILG-ISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            ++ D L+ RGL+   T +     A   E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     DT++   K+I G +S+      G +  V++NNYDW+   SF+DFL+ +G++  +  M++KESVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 HIFDELKERGLIFQTTDEEALRKALE-EGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRPN (Tyrosyl-tRNA synthetase OS=Streptococcus pneumoniae GN=tyrS PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.112e-33
Identity = 76/179 (42.46%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLE---KNILG-ISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            ++ D L+ RGL+   T +     A   E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     DT++   K+I G +S+      G +  V++NNYDW+   SF+DFL+ +G++  +  M++KESVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 HIFDELKERGLIFQTTDEEALRKALE-EGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRPJ (Tyrosyl-tRNA synthetase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=tyrS PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.112e-33
Identity = 76/179 (42.46%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLE---KNILG-ISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            ++ D L+ RGL+   T +     A   E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     DT++   K+I G +S+      G +  V++NNYDW+   SF+DFL+ +G++  +  M++KESVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 HIFDELKERGLIFQTTDEEALRKALE-EGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRPI (Tyrosyl-tRNA synthetase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=tyrS PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.112e-33
Identity = 76/179 (42.46%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLE---KNILG-ISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            ++ D L+ RGL+   T +     A   E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     DT++   K+I G +S+      G +  V++NNYDW+   SF+DFL+ +G++  +  M++KESVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 HIFDELKERGLIFQTTDEEALRKALE-EGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRP4 (Tyrosyl-tRNA synthetase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=tyrS PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.112e-33
Identity = 76/179 (42.46%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLE---KNILG-ISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            ++ D L+ RGL+   T +     A   E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     DT++   K+I G +S+      G +  V++NNYDW+   SF+DFL+ +G++  +  M++KESVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 HIFDELKERGLIFQTTDEEALRKALE-EGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRIET--GISYTEFAYQIMQGYDF 177          
The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
SYY_CHLT22.383e-3345.45Tyrosyl-tRNA synthetase OS=Chlamydia trachomatis (... [more]
SYY_STRZT3.112e-3342.46Tyrosyl-tRNA synthetase OS=Streptococcus pneumonia... [more]
SYY_STRZP3.112e-3342.46Tyrosyl-tRNA synthetase OS=Streptococcus pneumonia... [more]
SYY_STRZJ3.112e-3342.46Tyrosyl-tRNA synthetase OS=Streptococcus pneumonia... [more]
SYY_STRR63.112e-3342.46Tyrosyl-tRNA synthetase OS=Streptococcus pneumonia... [more]
SYY_STRPS3.112e-3342.46Tyrosyl-tRNA synthetase OS=Streptococcus pneumonia... [more]
SYY_STRPN3.112e-3342.46Tyrosyl-tRNA synthetase OS=Streptococcus pneumonia... [more]
SYY_STRPJ3.112e-3342.46Tyrosyl-tRNA synthetase OS=Streptococcus pneumonia... [more]
SYY_STRPI3.112e-3342.46Tyrosyl-tRNA synthetase OS=Streptococcus pneumonia... [more]
SYY_STRP43.112e-3342.46Tyrosyl-tRNA synthetase OS=Streptococcus pneumonia... [more]

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Properties
Property NameValue
Genbank descriptionC03011G11SK OF2 Citrus clementina cDNA clone C03011G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bp
AAGTGCTGCTGACCCAAACGCAAATGCCAGCCGCAGCCGCAGCCGCTGCC
GCTGCGTCGAGAACTCTCCTCTGCTTCCACCAAAAACTCATAATCTCATC
CATTTACAGCACCACCACCTCAAAAATCACCCACCCATTTCTTCAACGCA
TTAAAAACTCTGCTTTCTTCTCTTCGATCAGCTGCGTTCACCAACTCCAA
TCCGACCCACAGACACAAACCCACGGCCGTCACCCCAATGTCGTCGACAT
TCTCGAGAGAAGAGGCTTGCTTGAATCTATCACCAGTGACAATCTCCGCT
CACTCGCTTCATCCAATGAGAAAACCCTCAAAGTCTACTGCGGGTTTGAC
CCAACTGCTGAGTCCTTACACTTGGGTAACCTCTTGGGTATCATTGTTCT
CTCTTGGTTCCTCCGTTGCGGCCACCAAGCTGTCGCCTTGATCGGTGGCG
CCACCGCTCGTGTTGGTGACCCATCTGGGAAATCAATAGAAAGGCCTGAA
CTCGACATTGATACGTTAGAAAAGAACATTCTTGGAATTAGTAAGACTTT
TTCAACCATTTTTGGTTCTAGTAATGTTGTTATTTTGAATAATTATGATT
GGTGGAAAGATTTTAGCTTCCTGGATTTTCTTAAACAAGTGGGTCGATTT
GCGAGAATTGGGACTATGATTGCTAAGGAGAGTGTGAAGAAGAGGTTGGA
ATCTGAGCAAGGATTGAGCTTTACTGAGTTTAGTTATCAGTTGTTGCAGG
GATATGATTTTC
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