CX291662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_PARUW (Tyrosyl-tRNA synthetase OS=Protochlamydia amoebophila (strain UWE25) GN=tyrS PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.145e-50 Identity = 94/179 (52.51%), Postives = 131/179 (73.18%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFG----SSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 NV+D+L RG ++++TS+ +R L + + +KVYCGFDPTA+SLHLGNL+ I+ L+WF R GH VA++GGAT +GDPSGK+ ER LD ++ N+ GISK I ++ +ILNN DW+K+F+F+ FL+ VG+ R+ M+AK+SVK RL SE+G+SFTEF YQ+LQGYDF Sbjct: 3 NVMDVLRERGFIDAVTSEEIRQLTN---QPIKVYCGFDPTADSLHLGNLVAIMGLAWFQRFGHTPVAIVGGATGMIGDPSGKNAERQLLDEKKIQLNLKGISKNLEAILDFNHPTAPAIILNNLDWFKNFTFISFLRDVGKLFRLSPMLAKDSVKTRLNSEEGMSFTEFCYQILQGYDF 178
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_RHOBA (Tyrosyl-tRNA synthetase OS=Rhodopirellula baltica GN=tyrS PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.257e-42 Identity = 87/179 (48.60%), Postives = 122/179 (68.16%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGIS---KTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 ++++ L RGLL T +N + L +S +T +Y GFDPTA SLH+G ++ +++L F R GH +AL+GGAT +GDPSGKS ER L D L+KN+ G++ + F G + +LNN+DW KD+S+L+FL+ VG+ +G M+ KESV+ RLESE GLS+TEFSY LLQ YDF Sbjct: 15 SLIEDLRWRGLLNQTTDENGIAELLNSGPQT--IYIGFDPTATSLHVGGMMQLMMLRRFQRAGHNPIALVGGATGMIGDPSGKSEERNLLSADQLQKNVDGVAAQMRHFLDFEGDNAAKLLNNFDWMKDYSYLEFLRDVGKNFPVGAMMGKESVRSRLESEAGLSYTEFSYMLLQAYDF 191
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BACFR (Tyrosyl-tRNA synthetase OS=Bacteroides fragilis GN=tyrS PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.013e-40 Identity = 88/182 (48.35%), Postives = 118/182 (64.84%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF-----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL--ESEQGLSFTEFSYQLLQGYDF 761 N V+ L RG++ + LA ++ + Y G DPTA+SLH+G+L G+++L F RCGH+ +ALIGGAT +GDPSGKS ER LD +TL N I K + + ++NNYDW K+F+FLDF ++VG+ + M+AKESVKKRL E+ GLSFTEF+YQLLQGYDF Sbjct: 2 NFVEELRWRGMVHDMMPGTEELLA---KEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRCGHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDAPNRAELVNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYDF 180
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BACFN (Tyrosyl-tRNA synthetase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=tyrS PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.013e-40 Identity = 88/182 (48.35%), Postives = 118/182 (64.84%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF-----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL--ESEQGLSFTEFSYQLLQGYDF 761 N V+ L RG++ + LA ++ + Y G DPTA+SLH+G+L G+++L F RCGH+ +ALIGGAT +GDPSGKS ER LD +TL N I K + + ++NNYDW K+F+FLDF ++VG+ + M+AKESVKKRL E+ GLSFTEF+YQLLQGYDF Sbjct: 2 NFVEELRWRGMVHDMMPGTEELLA---KEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRCGHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDAPNRAELVNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYDF 180
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BACTN (Tyrosyl-tRNA synthetase OS=Bacteroides thetaiotaomicron GN=tyrS PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.629e-40 Identity = 88/182 (48.35%), Postives = 120/182 (65.93%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVV-----ILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL--ESEQGLSFTEFSYQLLQGYDF 761 N V+ L RG+L+ I L N++ + Y G DPTA+SLH+G+L G+++L RCGH+ +ALIGGAT +GDPSGKS ER L+ +TL N I K + + V ++NNYDW K+FSFLDF+++VG+ + M+AK+SVK+RL E+ GLSFTEF+YQLLQGYDF Sbjct: 2 NFVEELRWRGMLQDIMPGTEELL---NKEQVTAYLGIDPTADSLHIGHLCGVMILRHLQRCGHKPLALIGGATGMIGDPSGKSAERNLLNEETLRHNQACIKKQLAKFLDFESDVPNRAELVNNYDWMKEFSFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYDF 180
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_FLAPJ (Tyrosyl-tRNA synthetase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=tyrS PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 7.648e-40 Identity = 86/181 (47.51%), Postives = 122/181 (67.40%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTI--FGSSNV---VILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESE-QGLSFTEFSYQLLQGYDF 761 N+V+ L+ RGL + L +++ Y GFDPTA+SLH+G+++ II+L GH+ +ALIGGAT +GDPSGKS ER LD TL KN+ GI S+ F ++N +++NNYDW KDFSF+DF + +G+ + M++K+SVKKRL +E +G+SFTEF+YQL+QGYDF Sbjct: 3 NLVEELKWRGLFHDMMPGTEEQLT---KESTTAYIGFDPTADSLHIGSMVQIILLVHLKNFGHKPIALIGGATGMIGDPSGKSDERNLLDEATLNKNVAGIKAVLSSFLDFNTTNANAPILVNNYDWMKDFSFIDFARDIGKRITVNYMMSKDSVKKRLGAEGEGMSFTEFTYQLIQGYDF 180
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BACV8 (Tyrosyl-tRNA synthetase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=tyrS PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.225e-39 Identity = 85/182 (46.70%), Postives = 119/182 (65.38%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF-----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL--ESEQGLSFTEFSYQLLQGYDF 761 N V+ L RG++ ++ LA ++ + Y G DPTA+SLH+G+L G+++L F RCGH+ +AL+GGAT +GDPSGKS ER L +TL N+ I K + + ++NNYDW KDF+FLDF ++VG+ + M+AK+SV+KRL E+ GLSFTEF+YQLLQGYDF Sbjct: 2 NFVEELTWRGMVHTMMPGTEELLA---KEQVTAYLGIDPTADSLHIGHLCGVMMLRHFQRCGHKPLALVGGATGMIGDPSGKSQERNLLTEETLRHNVACIKKQLAKFLDFESDAPNKAELVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYDF 180
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_FLAJ1 (Tyrosyl-tRNA synthetase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=tyrS PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.796e-39 Identity = 86/185 (46.49%), Postives = 122/185 (65.95%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLK----VYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSN-----VVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESE-QGLSFTEFSYQLLQGYDF 761 N+V+ L+ RGL S+ + E+ LK Y GFDPTA+SLH+G+++ II+L GHQ +AL+GGAT +GDPSGKS ER L+ +TL KN+ GI S ++ +++NNYDW K+FSF+DF ++VG+ + M+AK+SVKKR+ E +G+SFTEF+YQL+QGYDF Sbjct: 3 NLVEELKWRGLYHD-------SMPGTEEQLLKEVTSAYIGFDPTADSLHIGSMVQIILLVHLKNFGHQPIALVGGATGMIGDPSGKSDERNLLNEETLAKNVAGIKSVLSRFLDFNSKEQNAPIMVNNYDWMKEFSFIDFAREVGKRITVNYMMAKDSVKKRINGEGEGMSFTEFTYQLIQGYDF 180
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYYM_YEAST (Tyrosyl-tRNA synthetase, mitochondrial OS=Saccharomyces cerevisiae GN=MSY1 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.104e-38 Identity = 86/223 (38.57%), Postives = 128/223 (57.40%), Query Frame = 3 Query: 150 IKNSAFFSSISCVHQLQSDPQTQTHGRHPNVVDILERRGLLESITSDN--LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF-----------------GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 + S F+S S + + Q + R N++D L++RGL+ ++ LR+ + N+K +K+YCG DPTA+SLHLGNL+ ++VL F GH V +IGGAT +VGDPSG+ ER ++ D + N+ IS+ F S NN++WWKD LDFL GR R+ +M+A++S+ RL+++ GL F EF+YQ+LQ YDF Sbjct: 31 LPKSRFYSQPSAL-----EVQGTSDSRSDNILDELKQRGLVSQVSQPESFLRTKLNGNDK-IKLYCGVDPTAQSLHLGNLVPLMVLLHFYVKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQSNVASISQQLQRFFKNGLEYYRNRCALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGFNEFTYQVLQAYDF 247
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_PORGI (Tyrosyl-tRNA synthetase OS=Porphyromonas gingivalis GN=tyrS PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.060e-37 Identity = 85/182 (46.70%), Postives = 113/182 (62.09%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF-----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL--ESEQGLSFTEFSYQLLQGYDF 761 N V+ L RG++ I L N+ Y G DPTA+SLH+G+L+G+++L F R GH+ +ALIGGAT +GDPS KS ER LD TL N I + + + ++NNYDW KD+SFL F++ +G+ + M+AK+SVKKRL ES GLSFTEFSYQLLQGYD+ Sbjct: 2 NFVEELRWRGMIHDIMPGTEEHL---NKGMTSAYVGIDPTADSLHIGHLVGVMMLRHFQRAGHRPIALIGGATGMIGDPSMKSAERVLLDEATLRHNQDCIKQQLAKFLDFDSDAPNAAKLVNNYDWMKDYSFLGFIRDIGKHITVNYMMAKDSVKKRLSAESSTGLSFTEFSYQLLQGYDY 180 The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bpback to top |