CX291662

Overview
NameCX291662
Unique NameCX291662
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length762
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY2_BACCR (Tyrosyl-tRNA synthetase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=tyrS2 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.545e-32
Identity = 71/179 (39.66%), Postives = 112/179 (62.57%), Query Frame = 3 
Query:  237 NVVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            N++D LE RG +   T +  LR L    EK + +YCG DPT +S+H+G+L+  +++  F   GH  V LIGGAT  +GDPSG+  ER    ++ ++ N+  ++     +F   G+S V ++NNYDW  + + ++FL+  G+   I +M+AK+ V  RL++  G+SFTEF+YQ+LQ  DF
Sbjct:    2 NIIDELEWRGAVNQQTDEEGLRKLVE--EKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFGGNSEVKMVNNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRLDT--GISFTEFTYQILQAMDF 176
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY2_BACAN (Tyrosyl-tRNA synthetase 2 OS=Bacillus anthracis GN=tyrS2 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.545e-32
Identity = 71/179 (39.66%), Postives = 112/179 (62.57%), Query Frame = 3 
Query:  237 NVVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            N++D LE RG +   T +  LR L    EK + +YCG DPT +S+H+G+L+  +++  F   GH  V LIGGAT  +GDPSG+  ER    ++ ++ N+  ++     +F   G+S V ++NNYDW  + + ++FL+  G+   I +M+AK+ V  RL++  G+SFTEF+YQ+LQ  DF
Sbjct:    2 NIIDELEWRGAVNQQTDEEGLRKLVE--EKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFGGNSEVKMVNNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRLDT--GISFTEFTYQILQAMDF 176
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_YERPY (Tyrosyl-tRNA synthetase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=tyrS PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.017e-32
Identity = 74/180 (41.11%), Postives = 111/180 (61.67%), Query Frame = 3 
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDF 761
            N++  L+ RGL+  +T ++  +   + +  + +YCGFDPTA+SLHLG+L+ ++ L  F   GH+ VAL+GGAT  +GDPS K+ ER     DT+ + +  I    S       G ++ +  NNYDW+   + L FL+ +G+   +  MI KE+VK+RL   + G+SFTEFSY LLQ YDF
Sbjct:    5 NLIKQLQERGLVAQVTDEDALAERLA-QGPISLYCGFDPTADSLHLGHLVPLLCLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_YERPS (Tyrosyl-tRNA synthetase OS=Yersinia pseudotuberculosis GN=tyrS PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.017e-32
Identity = 74/180 (41.11%), Postives = 111/180 (61.67%), Query Frame = 3 
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDF 761
            N++  L+ RGL+  +T ++  +   + +  + +YCGFDPTA+SLHLG+L+ ++ L  F   GH+ VAL+GGAT  +GDPS K+ ER     DT+ + +  I    S       G ++ +  NNYDW+   + L FL+ +G+   +  MI KE+VK+RL   + G+SFTEFSY LLQ YDF
Sbjct:    5 NLIKQLQERGLVAQVTDEDALAERLA-QGPISLYCGFDPTADSLHLGHLVPLLCLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_YERPP (Tyrosyl-tRNA synthetase OS=Yersinia pestis (strain Pestoides F) GN=tyrS PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.017e-32
Identity = 74/180 (41.11%), Postives = 111/180 (61.67%), Query Frame = 3 
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDF 761
            N++  L+ RGL+  +T ++  +   + +  + +YCGFDPTA+SLHLG+L+ ++ L  F   GH+ VAL+GGAT  +GDPS K+ ER     DT+ + +  I    S       G ++ +  NNYDW+   + L FL+ +G+   +  MI KE+VK+RL   + G+SFTEFSY LLQ YDF
Sbjct:    5 NLIKQLQERGLVAQVTDEDALAERLA-QGPISLYCGFDPTADSLHLGHLVPLLCLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_YERPN (Tyrosyl-tRNA synthetase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=tyrS PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.017e-32
Identity = 74/180 (41.11%), Postives = 111/180 (61.67%), Query Frame = 3 
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDF 761
            N++  L+ RGL+  +T ++  +   + +  + +YCGFDPTA+SLHLG+L+ ++ L  F   GH+ VAL+GGAT  +GDPS K+ ER     DT+ + +  I    S       G ++ +  NNYDW+   + L FL+ +G+   +  MI KE+VK+RL   + G+SFTEFSY LLQ YDF
Sbjct:    5 NLIKQLQERGLVAQVTDEDALAERLA-QGPISLYCGFDPTADSLHLGHLVPLLCLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_YERPG (Tyrosyl-tRNA synthetase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=tyrS PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.017e-32
Identity = 74/180 (41.11%), Postives = 111/180 (61.67%), Query Frame = 3 
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDF 761
            N++  L+ RGL+  +T ++  +   + +  + +YCGFDPTA+SLHLG+L+ ++ L  F   GH+ VAL+GGAT  +GDPS K+ ER     DT+ + +  I    S       G ++ +  NNYDW+   + L FL+ +G+   +  MI KE+VK+RL   + G+SFTEFSY LLQ YDF
Sbjct:    5 NLIKQLQERGLVAQVTDEDALAERLA-QGPISLYCGFDPTADSLHLGHLVPLLCLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_YERPE (Tyrosyl-tRNA synthetase OS=Yersinia pestis GN=tyrS PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.017e-32
Identity = 74/180 (41.11%), Postives = 111/180 (61.67%), Query Frame = 3 
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDF 761
            N++  L+ RGL+  +T ++  +   + +  + +YCGFDPTA+SLHLG+L+ ++ L  F   GH+ VAL+GGAT  +GDPS K+ ER     DT+ + +  I    S       G ++ +  NNYDW+   + L FL+ +G+   +  MI KE+VK+RL   + G+SFTEFSY LLQ YDF
Sbjct:    5 NLIKQLQERGLVAQVTDEDALAERLA-QGPISLYCGFDPTADSLHLGHLVPLLCLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_YERPB (Tyrosyl-tRNA synthetase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=tyrS PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.017e-32
Identity = 74/180 (41.11%), Postives = 111/180 (61.67%), Query Frame = 3 
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDF 761
            N++  L+ RGL+  +T ++  +   + +  + +YCGFDPTA+SLHLG+L+ ++ L  F   GH+ VAL+GGAT  +GDPS K+ ER     DT+ + +  I    S       G ++ +  NNYDW+   + L FL+ +G+   +  MI KE+VK+RL   + G+SFTEFSY LLQ YDF
Sbjct:    5 NLIKQLQERGLVAQVTDEDALAERLA-QGPISLYCGFDPTADSLHLGHLVPLLCLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_YERPA (Tyrosyl-tRNA synthetase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=tyrS PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.017e-32
Identity = 74/180 (41.11%), Postives = 111/180 (61.67%), Query Frame = 3 
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDF 761
            N++  L+ RGL+  +T ++  +   + +  + +YCGFDPTA+SLHLG+L+ ++ L  F   GH+ VAL+GGAT  +GDPS K+ ER     DT+ + +  I    S       G ++ +  NNYDW+   + L FL+ +G+   +  MI KE+VK+RL   + G+SFTEFSY LLQ YDF
Sbjct:    5 NLIKQLQERGLVAQVTDEDALAERLA-QGPISLYCGFDPTADSLHLGHLVPLLCLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183
The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
SYY2_BACCR1.545e-3239.66Tyrosyl-tRNA synthetase 2 OS=Bacillus cereus (stra... [more]
SYY2_BACAN1.545e-3239.66Tyrosyl-tRNA synthetase 2 OS=Bacillus anthracis GN... [more]
SYY_YERPY2.017e-3241.11Tyrosyl-tRNA synthetase OS=Yersinia pseudotubercul... [more]
SYY_YERPS2.017e-3241.11Tyrosyl-tRNA synthetase OS=Yersinia pseudotubercul... [more]
SYY_YERPP2.017e-3241.11Tyrosyl-tRNA synthetase OS=Yersinia pestis (strain... [more]
SYY_YERPN2.017e-3241.11Tyrosyl-tRNA synthetase OS=Yersinia pestis bv. Ant... [more]
SYY_YERPG2.017e-3241.11Tyrosyl-tRNA synthetase OS=Yersinia pestis bv. Ant... [more]
SYY_YERPE2.017e-3241.11Tyrosyl-tRNA synthetase OS=Yersinia pestis GN=tyrS... [more]
SYY_YERPB2.017e-3241.11Tyrosyl-tRNA synthetase OS=Yersinia pseudotubercul... [more]
SYY_YERPA2.017e-3241.11Tyrosyl-tRNA synthetase OS=Yersinia pestis bv. Ant... [more]

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Properties
Property NameValue
Genbank descriptionC03011G11SK OF2 Citrus clementina cDNA clone C03011G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bp
AAGTGCTGCTGACCCAAACGCAAATGCCAGCCGCAGCCGCAGCCGCTGCC
GCTGCGTCGAGAACTCTCCTCTGCTTCCACCAAAAACTCATAATCTCATC
CATTTACAGCACCACCACCTCAAAAATCACCCACCCATTTCTTCAACGCA
TTAAAAACTCTGCTTTCTTCTCTTCGATCAGCTGCGTTCACCAACTCCAA
TCCGACCCACAGACACAAACCCACGGCCGTCACCCCAATGTCGTCGACAT
TCTCGAGAGAAGAGGCTTGCTTGAATCTATCACCAGTGACAATCTCCGCT
CACTCGCTTCATCCAATGAGAAAACCCTCAAAGTCTACTGCGGGTTTGAC
CCAACTGCTGAGTCCTTACACTTGGGTAACCTCTTGGGTATCATTGTTCT
CTCTTGGTTCCTCCGTTGCGGCCACCAAGCTGTCGCCTTGATCGGTGGCG
CCACCGCTCGTGTTGGTGACCCATCTGGGAAATCAATAGAAAGGCCTGAA
CTCGACATTGATACGTTAGAAAAGAACATTCTTGGAATTAGTAAGACTTT
TTCAACCATTTTTGGTTCTAGTAATGTTGTTATTTTGAATAATTATGATT
GGTGGAAAGATTTTAGCTTCCTGGATTTTCTTAAACAAGTGGGTCGATTT
GCGAGAATTGGGACTATGATTGCTAAGGAGAGTGTGAAGAAGAGGTTGGA
ATCTGAGCAAGGATTGAGCTTTACTGAGTTTAGTTATCAGTTGTTGCAGG
GATATGATTTTC
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