CX291662

Overview
NameCX291662
Unique NameCX291662
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length762
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRPB (Tyrosyl-tRNA synthetase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=tyrS PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 74/179 (41.34%), Postives = 111/179 (62.01%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTL---EKNILGISKTFSTI-FGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            N+ + L+ RGL+   T+D    + +  E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     +T+      I G   TF     G +   ++NNYDW+   SF+DFL+ VG++  +  M++K+SVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 NIFEELKARGLVFQ-TTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRP8 (Tyrosyl-tRNA synthetase OS=Streptococcus pyogenes serotype M18 GN=tyrS PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 74/179 (41.34%), Postives = 111/179 (62.01%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTL---EKNILGISKTFSTI-FGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            N+ + L+ RGL+   T+D    + +  E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     +T+      I G   TF     G +   ++NNYDW+   SF+DFL+ VG++  +  M++K+SVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 NIFEELKARGLVFQ-TTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRP3 (Tyrosyl-tRNA synthetase OS=Streptococcus pyogenes serotype M3 GN=tyrS PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 74/179 (41.34%), Postives = 111/179 (62.01%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTL---EKNILGISKTFSTI-FGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            N+ + L+ RGL+   T+D    + +  E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     +T+      I G   TF     G +   ++NNYDW+   SF+DFL+ VG++  +  M++K+SVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 NIFEELKARGLVFQ-TTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRP1 (Tyrosyl-tRNA synthetase OS=Streptococcus pyogenes serotype M1 GN=tyrS PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 74/179 (41.34%), Postives = 111/179 (62.01%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTL---EKNILGISKTFSTI-FGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            N+ + L+ RGL+   T+D    + +  E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     +T+      I G   TF     G +   ++NNYDW+   SF+DFL+ VG++  +  M++K+SVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 NIFEELKARGLVFQ-TTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRCO (Tyrosyl-tRNA synthetase OS=Streptomyces coelicolor GN=tyrS PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 72/179 (40.22%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  237 NVVDILERRGLL-ESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDP---SGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            ++VD L+ RGL  +S   D LR   +    T   YCGFDPTA SLH+G+L+ ++ +    + GH+ +AL+GGAT ++GDP   + +++  PE     +E+ + G  + F +  G +  V++NN DW +  S ++FL+ +G+  R+  M+ K+SV +RLES +G+S+TEFSYQLLQ  DF
Sbjct:    3 DIVDELKWRGLFAQSTDEDALRKALADGPVTF--YCGFDPTAPSLHVGHLVQVLTVRRLQQAGHRPLALVGGATGQIGDPRPTAERTLNSPETVAGWVER-LRGQIEPFLSFEGENAAVMVNNLDWTEGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDF 178          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_LACLS (Tyrosyl-tRNA synthetase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=tyrS PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 75/179 (41.90%), Postives = 109/179 (60.89%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            N+ D L+ RGL+   T +   S A + E  +  Y G+DPTA+SLHLGNL+ I+ +      GH+  AL+GGAT  +GDPS K  ER     DT+ K    I            G +   + NNY+W+++ +F+DFL+ VG+   +  MI+K+SVK R+ES  G+S+TEF+YQ++QGYDF
Sbjct:    2 NIFDELKARGLVFQTTDEAALSKALT-EDMVSYYVGYDPTADSLHLGNLVLILTMKRLQMAGHKPYALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMTNNYNWFENLTFIDFLRDVGKHFTVNYMISKDSVKSRMES--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_LACLM (Tyrosyl-tRNA synthetase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=tyrS PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 75/179 (41.90%), Postives = 109/179 (60.89%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            N+ D L+ RGL+   T +   S A + E  +  Y G+DPTA+SLHLGNL+ I+ +      GH+  AL+GGAT  +GDPS K  ER     DT+ K    I            G +   + NNY+W+++ +F+DFL+ VG+   +  MI+K+SVK R+ES  G+S+TEF+YQ++QGYDF
Sbjct:    2 NIFDELKARGLVFQTTDEAALSKALT-EDMVSYYVGYDPTADSLHLGNLVLILTMKRLQMAGHKPYALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMTNNYNWFENLTFIDFLRDVGKHFTVNYMISKDSVKSRMES--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_LACLA (Tyrosyl-tRNA synthetase OS=Lactococcus lactis subsp. lactis GN=tyrS PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 75/179 (41.90%), Postives = 109/179 (60.89%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            N+ D L+ RGL+   T +   S A + E  +  Y G+DPTA+SLHLGNL+ I+ +      GH+  AL+GGAT  +GDPS K  ER     DT+ K    I            G +   + NNY+W+++ +F+DFL+ VG+   +  MI+K+SVK R+ES  G+S+TEF+YQ++QGYDF
Sbjct:    2 NIFDELKARGLVFQTTDEAALSKALT-EDMVSYYVGYDPTADSLHLGNLVLILTMKRLQMAGHKPYALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMTNNYNWFENLTFIDFLRDVGKHFTVNYMISKDSVKSRMES--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_CLOB8 (Tyrosyl-tRNA synthetase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=tyrS PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 72/177 (40.68%), Postives = 106/177 (59.89%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTI--FGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            NV+D L  RG ++  T +        NEK +  Y GFDPTA+SLH+G+ + ++ ++   R GH+ +ALIGG TA VGDPSGK+  R  L  + ++ N+  I K       F     ++ NN DW  + +++DFL++VG    +  M+  E  K+RL  E+GLSF EF+Y L+QGYDF
Sbjct:    3 NVLDELLERGYIKQFTHEEETRKLLENEK-ITFYIGFDPTADSLHVGHFIAMMFMAHMQRAGHRPIALIGGGTAMVGDPSGKTDMRKMLTKEDIQHNVDSIKKQMERFIDFSDGKAILANNADWLLNLNYVDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQGYDF 176          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY1_PSEHT (Tyrosyl-tRNA synthetase 1 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=tyrS1 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 76/178 (42.70%), Postives = 110/178 (61.80%), Query Frame = 3
Query:  240 VVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFG---SSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLE-SEQGLSFTEFSYQLLQGYDF 761
            +++ +  RGL+  ++  +L  L      +  VYCGFDPTA SLH+G+L+ +++L  F   GH+AVALIGGAT  +GDPS K+ ER     +T++  +  +S    ++     S  + + NN DW+     LDF + VG+   I  MI +ESVK+RL+  +QGLSFTEFSY LLQ YDF
Sbjct:    5 LLEDITHRGLVSQVS--DLAQLEQLLATSQVVYCGFDPTAGSLHIGHLVPLLMLKRFNDAGHKAVALIGGATGLIGDPSFKATERSLNSKETVQGWVADLSSQVESVMNPHLSEPIQLKNNADWFSGIEVLDFFRDVGKHFSINNMINRESVKQRLQRPDQGLSFTEFSYTLLQSYDF 180          
The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
SYY_STRPB1.001e-3141.34Tyrosyl-tRNA synthetase OS=Streptococcus pyogenes ... [more]
SYY_STRP81.001e-3141.34Tyrosyl-tRNA synthetase OS=Streptococcus pyogenes ... [more]
SYY_STRP31.001e-3141.34Tyrosyl-tRNA synthetase OS=Streptococcus pyogenes ... [more]
SYY_STRP11.001e-3141.34Tyrosyl-tRNA synthetase OS=Streptococcus pyogenes ... [more]
SYY_STRCO1.001e-3140.22Tyrosyl-tRNA synthetase OS=Streptomyces coelicolor... [more]
SYY_LACLS1.001e-3141.90Tyrosyl-tRNA synthetase OS=Lactococcus lactis subs... [more]
SYY_LACLM1.001e-3141.90Tyrosyl-tRNA synthetase OS=Lactococcus lactis subs... [more]
SYY_LACLA1.001e-3141.90Tyrosyl-tRNA synthetase OS=Lactococcus lactis subs... [more]
SYY_CLOB81.001e-3140.68Tyrosyl-tRNA synthetase OS=Clostridium beijerincki... [more]
SYY1_PSEHT1.001e-3142.70Tyrosyl-tRNA synthetase 1 OS=Pseudoalteromonas hal... [more]

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Properties
Property NameValue
Genbank descriptionC03011G11SK OF2 Citrus clementina cDNA clone C03011G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bp
AAGTGCTGCTGACCCAAACGCAAATGCCAGCCGCAGCCGCAGCCGCTGCC
GCTGCGTCGAGAACTCTCCTCTGCTTCCACCAAAAACTCATAATCTCATC
CATTTACAGCACCACCACCTCAAAAATCACCCACCCATTTCTTCAACGCA
TTAAAAACTCTGCTTTCTTCTCTTCGATCAGCTGCGTTCACCAACTCCAA
TCCGACCCACAGACACAAACCCACGGCCGTCACCCCAATGTCGTCGACAT
TCTCGAGAGAAGAGGCTTGCTTGAATCTATCACCAGTGACAATCTCCGCT
CACTCGCTTCATCCAATGAGAAAACCCTCAAAGTCTACTGCGGGTTTGAC
CCAACTGCTGAGTCCTTACACTTGGGTAACCTCTTGGGTATCATTGTTCT
CTCTTGGTTCCTCCGTTGCGGCCACCAAGCTGTCGCCTTGATCGGTGGCG
CCACCGCTCGTGTTGGTGACCCATCTGGGAAATCAATAGAAAGGCCTGAA
CTCGACATTGATACGTTAGAAAAGAACATTCTTGGAATTAGTAAGACTTT
TTCAACCATTTTTGGTTCTAGTAATGTTGTTATTTTGAATAATTATGATT
GGTGGAAAGATTTTAGCTTCCTGGATTTTCTTAAACAAGTGGGTCGATTT
GCGAGAATTGGGACTATGATTGCTAAGGAGAGTGTGAAGAAGAGGTTGGA
ATCTGAGCAAGGATTGAGCTTTACTGAGTTTAGTTATCAGTTGTTGCAGG
GATATGATTTTC
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