CX291662

Overview
NameCX291662
Unique NameCX291662
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length762
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRU0 (Tyrosyl-tRNA synthetase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=tyrS PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.913e-31
Identity = 73/179 (40.78%), Postives = 113/179 (63.13%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTL---EKNILG-ISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            N+ + L+ RGL+   T+D    + +  E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     +T+      I G +S+      G++   ++NNYDW+   SF+DFL+ VG++  +  M++K+SVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 NIFEELKARGLVFQ-TTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSGKIKGQLSQFLDFENGANKAELVNNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRP6 (Tyrosyl-tRNA synthetase OS=Streptococcus pyogenes serotype M6 GN=tyrS PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.913e-31
Identity = 72/179 (40.22%), Postives = 111/179 (62.01%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIER----PELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            N+ + L+ RGL+   T+D    + +  E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     E  ++  +K    +S       G +   ++NNYDW+   SF+DFL+ VG++  +  M++K+SVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 NIFEELKARGLVFQ-TTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSAFLDFENGDNKAELVNNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRIET--GISYTEFAYQIMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_DESAA (Tyrosyl-tRNA synthetase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=tyrS PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.913e-31
Identity = 75/177 (42.37%), Postives = 102/177 (57.63%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFG-SSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            NV+  L+ RG +E  T D  L  L S  +  +  Y GFDPTA SLH+G+L+ I+ L+   R GH+ +AL+GG T  VGDPSGK+  R  L ++ +  N  GI    +         V  NN +W     +++FL+  GR   +  MI  ES + RLESE+GLSF EF+Y LLQ YDF
Sbjct:    4 NVLQTLKERGFIEQTTHDQELEDLLSGEQ--VSCYIGFDPTASSLHVGSLVPIMSLAHMQRAGHRPIALVGGGTGLVGDPSGKTEMRKLLTLEDVNNNAEGIRAQLARFIDFDKGAVQENNANWLVGLKYIEFLRDFGRHFSVNRMIKAESYRMRLESEEGLSFIEFNYMLLQAYDF 178          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY1_BACSU (Tyrosyl-tRNA synthetase 1 OS=Bacillus subtilis GN=tyrS1 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.913e-31
Identity = 74/179 (41.34%), Postives = 108/179 (60.34%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            N+++ L  RGL++ +T +   +    NE+ +++Y GFDPTA+SLH+G+LL I+ L  F   GH  +AL+GGAT  +GDPSGK  ER     D + +    I    S         +  VI NN+DW    + +DFL+ VG+   I  M+AK++V  R+ES  G+S+TEFSY +LQ YDF
Sbjct:    3 NLLEDLSFRGLIQQMTDEEGLN-KQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQLAGHHPIALVGGATGLIGDPSGKKAERTLNTADIVSEWSQKIKNQLSRFLDFEAAENPAVIANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRIES--GISYTEFSYMILQSYDF 178          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_RHIME (Tyrosyl-tRNA synthetase OS=Rhizobium meliloti GN=tyrS PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.805e-31
Identity = 72/174 (41.38%), Postives = 100/174 (57.47%), Query Frame = 3
Query:  252 LERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            L  RG +   TSD+         +T+  Y GFDPTA SLH G L+ I++L W    GH+ ++L+GG T  VGDPS K   R  +  +T+  NI  I   FS       G  + +++NN DW    ++L+FL+ VGR   +  M++ +SVK RLE EQ LSF EF+Y +LQ YDF
Sbjct:   12 LSERGFIHQ-TSDDAGLDQLFRTETVTAYIGFDPTAASLHAGGLIQIMMLHWLQATGHRPISLMGGGTGMVGDPSFKDEARQLMTPETIAANIASIKTVFSNYLRYGDGPKDALMINNADWLLGINYLEFLRDVGRHFSVNRMLSFDSVKMRLEREQSLSFLEFNYMILQAYDF 184          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_CLOK5 (Tyrosyl-tRNA synthetase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=tyrS PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.805e-31
Identity = 71/178 (39.89%), Postives = 109/178 (61.24%), Query Frame = 3
Query:  237 NVVDILERRGLLESIT-SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTI--FGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            NV DIL  RG ++ IT  D +R L    + T   Y GFDPTA+SLH+G+ L ++V+S   + GH+ +AL+GG TA +GDP+GK+  R  L  + ++ N     K FS    F     ++ NN DW  + ++++FL+++G    +  M+  E  K+R+  E+GL+F EF+Y L+QGYDF
Sbjct:    3 NVYDILLERGYIKQITHEDEVRELLGKEKVTF--YIGFDPTADSLHIGHFLQMMVMSHMQKAGHKPIALLGGGTAMIGDPTGKTDMRKMLSREQIQHNADCFKKQFSKFIDFEDEKAIMANNADWLMNLNYVNFLREIGVHFSVNKMLTAECFKQRM--EKGLTFLEFNYMLMQGYDF 176          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_CLOK1 (Tyrosyl-tRNA synthetase OS=Clostridium kluyveri (strain NBRC 12016) GN=tyrS PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.805e-31
Identity = 71/178 (39.89%), Postives = 109/178 (61.24%), Query Frame = 3
Query:  237 NVVDILERRGLLESIT-SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTI--FGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            NV DIL  RG ++ IT  D +R L    + T   Y GFDPTA+SLH+G+ L ++V+S   + GH+ +AL+GG TA +GDP+GK+  R  L  + ++ N     K FS    F     ++ NN DW  + ++++FL+++G    +  M+  E  K+R+  E+GL+F EF+Y L+QGYDF
Sbjct:    3 NVYDILLERGYIKQITHEDEVRELLGKEKVTF--YIGFDPTADSLHIGHFLQMMVMSHMQKAGHKPIALLGGGTAMIGDPTGKTDMRKMLSREQIQHNADCFKKQFSKFIDFEDEKAIMANNADWLMNLNYVNFLREIGVHFSVNKMLTAECFKQRM--EKGLTFLEFNYMLMQGYDF 176          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BLOPB (Tyrosyl-tRNA synthetase OS=Blochmannia pennsylvanicus (strain BPEN) GN=tyrS PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.805e-31
Identity = 72/186 (38.71%), Postives = 112/186 (60.22%), Query Frame = 3
Query:  222 HGRHPNVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSN-----VVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLE-SEQGLSFTEFSYQLLQGYDF 761
            + ++ +++ +L  R L+  IT+     +     K++ +YCGFDPT++SLH+G+L+ ++ L  F   GH+ + L+GG T  +GDPS K  ER    I+T++K I  I    S     S+       I+NNYDW    S L FL+ +G+F  +  MI K+++KKRL+ +  G+S+TEFSY LLQ YDF
Sbjct:    2 NNKNIDIIQLLYERDLIAQITNQEAL-IKILKSKSITLYCGFDPTSDSLHIGHLVPLLCLRQFQIFGHRPIILLGGGTGLIGDPSFKDSERKLNLIETVQKWIEKIKYQVSLFVDFSHSQYSQACIVNNYDWLSSISLLTFLRDIGKFFSVNKMINKDAIKKRLQKNNYGISYTEFSYNLLQSYDF 186          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRE4 (Tyrosyl-tRNA synthetase OS=Streptococcus equi subsp. equi (strain 4047) GN=tyrS PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.969e-31
Identity = 74/179 (41.34%), Postives = 110/179 (61.45%), Query Frame = 3
Query:  237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIER----PELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            N+ + L+ RGL+   T+D    + +  E  +  Y G+DPTA+SLHLG+L+ I+        GH+  AL+GGAT  +GDPS K  ER     E  +D  +K    +S       G +   ++NNYDW+   SF+DFL+ VG+   I  M++K+SVKKR+E+  G+S+TEF+YQ++QGYDF
Sbjct:    2 NIFEELKARGLVFQ-TTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERILQTKETVLDWSQKIKEQLSCFLDFDNGENKAELVNNYDWFSQISFIDFLRDVGKHFTINYMMSKDSVKKRIET--GISYTEFAYQVMQGYDF 177          
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY1_BACCR (Tyrosyl-tRNA synthetase 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=tyrS1 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.969e-31
Identity = 73/178 (41.01%), Postives = 103/178 (57.87%), Query Frame = 3
Query:  240 VVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNV----VILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            ++  LE RGL+   T D         E ++K+YCGFDPTA+SLH+G++  +++L  F   GHQ +AL+GG T  +GDPSGK  ER     DT+      I    S      NV     + NNYDW  +   + FL+ +G+   +  M+AK++V  RLE+  G+SFTEFSY +LQ YDF
Sbjct:    3 ILQDLEFRGLINQQTDDEGFEQLLEKE-SVKLYCGFDPTADSLHIGHMYPVLMLRRFQLAGHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRLET--GISFTEFSYMILQSYDF 177          
The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
SYY_STRU02.913e-3140.78Tyrosyl-tRNA synthetase OS=Streptococcus uberis (s... [more]
SYY_STRP62.913e-3140.22Tyrosyl-tRNA synthetase OS=Streptococcus pyogenes ... [more]
SYY_DESAA2.913e-3142.37Tyrosyl-tRNA synthetase OS=Desulfatibacillum alken... [more]
SYY1_BACSU2.913e-3141.34Tyrosyl-tRNA synthetase 1 OS=Bacillus subtilis GN=... [more]
SYY_RHIME3.805e-3141.38Tyrosyl-tRNA synthetase OS=Rhizobium meliloti GN=t... [more]
SYY_CLOK53.805e-3139.89Tyrosyl-tRNA synthetase OS=Clostridium kluyveri (s... [more]
SYY_CLOK13.805e-3139.89Tyrosyl-tRNA synthetase OS=Clostridium kluyveri (s... [more]
SYY_BLOPB3.805e-3138.71Tyrosyl-tRNA synthetase OS=Blochmannia pennsylvani... [more]
SYY_STRE44.969e-3141.34Tyrosyl-tRNA synthetase OS=Streptococcus equi subs... [more]
SYY1_BACCR4.969e-3141.01Tyrosyl-tRNA synthetase 1 OS=Bacillus cereus (stra... [more]

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Properties
Property NameValue
Genbank descriptionC03011G11SK OF2 Citrus clementina cDNA clone C03011G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bp
AAGTGCTGCTGACCCAAACGCAAATGCCAGCCGCAGCCGCAGCCGCTGCC
GCTGCGTCGAGAACTCTCCTCTGCTTCCACCAAAAACTCATAATCTCATC
CATTTACAGCACCACCACCTCAAAAATCACCCACCCATTTCTTCAACGCA
TTAAAAACTCTGCTTTCTTCTCTTCGATCAGCTGCGTTCACCAACTCCAA
TCCGACCCACAGACACAAACCCACGGCCGTCACCCCAATGTCGTCGACAT
TCTCGAGAGAAGAGGCTTGCTTGAATCTATCACCAGTGACAATCTCCGCT
CACTCGCTTCATCCAATGAGAAAACCCTCAAAGTCTACTGCGGGTTTGAC
CCAACTGCTGAGTCCTTACACTTGGGTAACCTCTTGGGTATCATTGTTCT
CTCTTGGTTCCTCCGTTGCGGCCACCAAGCTGTCGCCTTGATCGGTGGCG
CCACCGCTCGTGTTGGTGACCCATCTGGGAAATCAATAGAAAGGCCTGAA
CTCGACATTGATACGTTAGAAAAGAACATTCTTGGAATTAGTAAGACTTT
TTCAACCATTTTTGGTTCTAGTAATGTTGTTATTTTGAATAATTATGATT
GGTGGAAAGATTTTAGCTTCCTGGATTTTCTTAAACAAGTGGGTCGATTT
GCGAGAATTGGGACTATGATTGCTAAGGAGAGTGTGAAGAAGAGGTTGGA
ATCTGAGCAAGGATTGAGCTTTACTGAGTTTAGTTATCAGTTGTTGCAGG
GATATGATTTTC
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