CX291662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_CLOB1 (Tyrosyl-tRNA synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=tyrS PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.446e-30 Identity = 67/178 (37.64%), Postives = 109/178 (61.24%), Query Frame = 3 Query: 237 NVVDILERRGLLESIT-SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTI--FGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 NV DIL+ RG ++ +T + +R L + + Y GFDPTA+SLH+G+ L ++V++ + GH+ +AL+GG T +GDP+GK+ R + + +E N K + I F +++NN DW + ++++FL+++G + M+ E K RL E+GLSF EF+Y L+QGYDF Sbjct: 3 NVYDILKERGYIKQLTHEEEIRELLGKEK--ISFYIGFDPTADSLHVGHFLQMMVMAHMQKAGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEHNCNCFKKQLAKIIDFSEDKAIMVNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDF 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_ALISL (Tyrosyl-tRNA synthetase OS=Aliivibrio salmonicida (strain LFI1238) GN=tyrS PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.446e-30 Identity = 73/176 (41.48%), Postives = 112/176 (63.64%), Query Frame = 3 Query: 252 LERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIER----PELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESE-QGLSFTEFSYQLLQGYDF 761 L+ RGL+ T+D L S++ +TL YCGFDPTA+SLH+G+L+ ++VL F + GH+ +AL+GGAT +GDPS K+ ER ++ D + K +S + ++NN DW + + ++F++ +G+ + +MI KESVK+R++ E G+SFTEFSY LLQ YDF Sbjct: 11 LKARGLIAQCTADEELAEHLSTDCRTL--YCGFDPTADSLHIGSLVPLLVLKRFQQAGHKPLALVGGATGLIGDPSFKAAERQLNTSDVVGDWVNKIRAQVSAFVDFNESKNGAEVVNNLDWIGEINVIEFMRDIGKHFSVNSMIQKESVKQRIDREGSGISFTEFSYMLLQSYDF 184
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_RHORT (Tyrosyl-tRNA synthetase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=tyrS PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.888e-30 Identity = 69/176 (39.20%), Postives = 106/176 (60.23%), Query Frame = 3 Query: 249 ILERRGLLESITS-DNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 ++ RG + T D L +L + + Y GFD TA+SLH+G+L+ I++L W R GH+ V L+GG T R+GDPS + RP L + + +N+ GI + FS G+++ V++NN DW +++ FL+ GR + M+ +SV+ RL+ EQ LSF EF+Y +LQ YDF Sbjct: 11 VVRDRGFIHQCTDLDGLDALLAKGP--VSAYIGFDCTADSLHVGSLIQIMLLHWLQRTGHRPVVLMGGGTTRIGDPSFRDEARPLLTDEKIGQNMAGIRQVFSRFLSFGEGATDAVMVNNADWLDGLAYIPFLRDFGRHFSVNRMLTFDSVRLRLDREQPLSFLEFNYMILQAYDF 184
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_RHOPA (Tyrosyl-tRNA synthetase OS=Rhodopseudomonas palustris GN=tyrS PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.888e-30 Identity = 70/178 (39.33%), Postives = 110/178 (61.80%), Query Frame = 3 Query: 243 VDILERRGLLESITS-DNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 +++L+ RG + I+ D+L +LA+ E + Y G+D TA SLH+G+LL I++L W G++ +AL+GG T RVGDPSG+ R L + ++ N I TFS G S+ ++ +N +W ++++ L+++GR I M+ +SVK RL+ EQ LSF EF+Y +LQ YDF Sbjct: 9 MNVLQSRGFIHQISDPDSLDALAAKGE--VVAYVGYDCTAASLHVGHLLSIMMLHWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKESIKGTFSKFIKFGDGHSDALMADNAEWLTKLNYIEMLREIGRHFSINRMLTMDSVKLRLDREQELSFIEFNYMILQSYDF 184
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_CLOBM (Tyrosyl-tRNA synthetase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=tyrS PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.888e-30 Identity = 67/178 (37.64%), Postives = 109/178 (61.24%), Query Frame = 3 Query: 237 NVVDILERRGLLESIT-SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTI--FGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 NV DIL+ RG ++ +T + +R L + + Y GFDPTA+SLH+G+ L ++V++ + GH+ +AL+GG T +GDP+GK+ R + + +E N K + I F +++NN DW + ++++FL+++G + M+ E K RL E+GLSF EF+Y L+QGYDF Sbjct: 3 NVYDILKERGYIKQLTHEEEIRELLGKEK--ISFYIGFDPTADSLHVGHFLQMMVMAHMQKAGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEYNCNCFKKQLAKIIDFSEDKAIMVNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDF 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_CLOB6 (Tyrosyl-tRNA synthetase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=tyrS PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.888e-30 Identity = 67/178 (37.64%), Postives = 109/178 (61.24%), Query Frame = 3 Query: 237 NVVDILERRGLLESIT-SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTI--FGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 NV DIL+ RG ++ +T + +R L + + Y GFDPTA+SLH+G+ L ++V++ + GH+ +AL+GG T +GDP+GK+ R + + +E N K + I F +++NN DW + ++++FL+++G + M+ E K RL E+GLSF EF+Y L+QGYDF Sbjct: 3 NVYDILKERGYIKQLTHEEEIRELLGKEK--ISFYIGFDPTADSLHVGHFLQMMVMAHMQKAGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEYNCNCFKKQLAKIIDFSEDKAIMVNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDF 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_WIGBR (Tyrosyl-tRNA synthetase OS=Wigglesworthia glossinidia brevipalpis GN=tyrS PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30 Identity = 73/183 (39.89%), Postives = 112/183 (61.20%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSD-NLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGD---PSGKSIERPELDID----TLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 +++ L+ R L+ +T + N++ + EK + +YCGFDPTA+SLH+G+L+ ++ L F GH + +IGGATA +GD KS ++ T+E IL I K + + N++ILNNY W K+ ++FL+ +GRF I ++ KE VKK+L+ Q +SF EFSY LLQGYD+ Sbjct: 3 DLIQELKNRKLISKLTDEINIKKILK--EKKINLYCGFDPTADSLHIGHLIPLLFLKRFSNFGHIPIIVIGGATALLGDFNIKKNKSFLEKYKNVKNWSKTIENQILNIIKYENN---NCNLIILNNYLWIKELKIINFLRDIGRFISINKILRKEIVKKKLKENQHISFMEFSYSLLQGYDY 180
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STRAW (Tyrosyl-tRNA synthetase OS=Streptomyces avermitilis GN=tyrS PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30 Identity = 73/179 (40.78%), Postives = 112/179 (62.57%), Query Frame = 3 Query: 237 NVVDILERRGLLE-SITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDP---SGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 ++VD L+ RGL+ S D LR + T YCGFDPTA SLHLGNL+ I+ + + G++ + L+GGAT +GDP S +++ E+ + +E+ I+ G + +++NN DW + S ++FL+ VG++ R+ MIAKE+V +RL S+ G+S+TEFSYQ+LQG DF Sbjct: 3 DIVDELKWRGLVALSTDEDALRKAFADGPVTF--YCGFDPTAPSLHLGNLVQILTMRRIQQAGNRPLGLVGGATGLIGDPKPNSERTLNSREVVAEWVERLRAQIAPLLD-FEGPNAAIMVNNLDWTQGLSAIEFLRDVGKYFRVNKMIAKEAVSRRLNSDAGISYTEFSYQILQGMDF 178
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STACT (Tyrosyl-tRNA synthetase OS=Staphylococcus carnosus (strain TM300) GN=tyrS PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30 Identity = 71/174 (40.80%), Postives = 106/174 (60.92%), Query Frame = 3 Query: 252 LERRGLLESIT-SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 LE RGL+ T ++ L ++ + + TL YCG DPTA+S+H+G+LL ++ L F GH+ + LIGG T +GDPSGK+ ER + +E+N+ GI IF G ++NN DW S +DFL+ G+ + M+ K+SV+ RLE+ G+S+TEF+Y +LQ DF Sbjct: 9 LEWRGLIYQQTDAEGLENILNKEQVTL--YCGVDPTADSMHIGHLLPLLTLRRFQNHGHKPIVLIGGGTGMIGDPSGKTDERVLQTEEQVEQNVRGIGNQMDKIFDFSGKEAAQLVNNRDWLGKISLIDFLRDYGKHVGVNYMLGKDSVQSRLEN--GISYTEFTYMILQAIDF 178
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STAAW (Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (strain MW2) GN=tyrS PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30 Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 3 Query: 240 VVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 +++ L+ RGL+ T + + L + + TL YCG DPTA+SLH+G+LL + L F GH+ + LIGG T +GDPSGKS ER + ++KNI GISK IF V++NN DW S + FL+ G+ + M+ K+S++ RL E G+S+TEF+Y +LQ DF Sbjct: 5 LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTL--YCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDF 178 The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bpback to top |