CX291662

Overview
NameCX291662
Unique NameCX291662
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length762
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STAAT (Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=tyrS PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30
Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 3 
Query:  240 VVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            +++ L+ RGL+   T +  +  L +  + TL  YCG DPTA+SLH+G+LL  + L  F   GH+ + LIGG T  +GDPSGKS ER     + ++KNI GISK    IF        V++NN DW    S + FL+  G+   +  M+ K+S++ RL  E G+S+TEF+Y +LQ  DF
Sbjct:    5 LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTL--YCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDF 178
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STAAS (Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (strain MSSA476) GN=tyrS PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30
Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 3 
Query:  240 VVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            +++ L+ RGL+   T +  +  L +  + TL  YCG DPTA+SLH+G+LL  + L  F   GH+ + LIGG T  +GDPSGKS ER     + ++KNI GISK    IF        V++NN DW    S + FL+  G+   +  M+ K+S++ RL  E G+S+TEF+Y +LQ  DF
Sbjct:    5 LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTL--YCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDF 178
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STAAR (Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (strain MRSA252) GN=tyrS PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30
Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 3 
Query:  240 VVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            +++ L+ RGL+   T +  +  L +  + TL  YCG DPTA+SLH+G+LL  + L  F   GH+ + LIGG T  +GDPSGKS ER     + ++KNI GISK    IF        V++NN DW    S + FL+  G+   +  M+ K+S++ RL  E G+S+TEF+Y +LQ  DF
Sbjct:    5 LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTL--YCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDF 178
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STAAN (Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (strain N315) GN=tyrS PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30
Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 3 
Query:  240 VVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            +++ L+ RGL+   T +  +  L +  + TL  YCG DPTA+SLH+G+LL  + L  F   GH+ + LIGG T  +GDPSGKS ER     + ++KNI GISK    IF        V++NN DW    S + FL+  G+   +  M+ K+S++ RL  E G+S+TEF+Y +LQ  DF
Sbjct:    5 LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTL--YCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDF 178
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STAAM (Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=tyrS PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30
Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 3 
Query:  240 VVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            +++ L+ RGL+   T +  +  L +  + TL  YCG DPTA+SLH+G+LL  + L  F   GH+ + LIGG T  +GDPSGKS ER     + ++KNI GISK    IF        V++NN DW    S + FL+  G+   +  M+ K+S++ RL  E G+S+TEF+Y +LQ  DF
Sbjct:    5 LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTL--YCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDF 178
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STAAE (Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (strain Newman) GN=tyrS PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30
Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 3 
Query:  240 VVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            +++ L+ RGL+   T +  +  L +  + TL  YCG DPTA+SLH+G+LL  + L  F   GH+ + LIGG T  +GDPSGKS ER     + ++KNI GISK    IF        V++NN DW    S + FL+  G+   +  M+ K+S++ RL  E G+S+TEF+Y +LQ  DF
Sbjct:    5 LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTL--YCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDF 178
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STAAC (Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (strain COL) GN=tyrS PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30
Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 3 
Query:  240 VVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            +++ L+ RGL+   T +  +  L +  + TL  YCG DPTA+SLH+G+LL  + L  F   GH+ + LIGG T  +GDPSGKS ER     + ++KNI GISK    IF        V++NN DW    S + FL+  G+   +  M+ K+S++ RL  E G+S+TEF+Y +LQ  DF
Sbjct:    5 LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTL--YCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQIHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDF 178
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STAAB (Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=tyrS PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30
Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 3 
Query:  240 VVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            +++ L+ RGL+   T +  +  L +  + TL  YCG DPTA+SLH+G+LL  + L  F   GH+ + LIGG T  +GDPSGKS ER     + ++KNI GISK    IF        V++NN DW    S + FL+  G+   +  M+ K+S++ RL  E G+S+TEF+Y +LQ  DF
Sbjct:    5 LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTL--YCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDF 178
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STAA9 (Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (strain JH9) GN=tyrS PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30
Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 3 
Query:  240 VVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            +++ L+ RGL+   T +  +  L +  + TL  YCG DPTA+SLH+G+LL  + L  F   GH+ + LIGG T  +GDPSGKS ER     + ++KNI GISK    IF        V++NN DW    S + FL+  G+   +  M+ K+S++ RL  E G+S+TEF+Y +LQ  DF
Sbjct:    5 LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTL--YCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDF 178
[Close]
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STAA8 (Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (strain NCTC 8325) GN=tyrS PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.466e-30
Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 3 
Query:  240 VVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761
            +++ L+ RGL+   T +  +  L +  + TL  YCG DPTA+SLH+G+LL  + L  F   GH+ + LIGG T  +GDPSGKS ER     + ++KNI GISK    IF        V++NN DW    S + FL+  G+   +  M+ K+S++ RL  E G+S+TEF+Y +LQ  DF
Sbjct:    5 LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTL--YCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDF 178
The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
SYY_STAAT2.466e-3041.01Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (... [more]
SYY_STAAS2.466e-3041.01Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (... [more]
SYY_STAAR2.466e-3041.01Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (... [more]
SYY_STAAN2.466e-3041.01Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (... [more]
SYY_STAAM2.466e-3041.01Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (... [more]
SYY_STAAE2.466e-3041.01Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (... [more]
SYY_STAAC2.466e-3041.01Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (... [more]
SYY_STAAB2.466e-3041.01Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (... [more]
SYY_STAA92.466e-3041.01Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (... [more]
SYY_STAA82.466e-3041.01Tyrosyl-tRNA synthetase OS=Staphylococcus aureus (... [more]

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Properties
Property NameValue
Genbank descriptionC03011G11SK OF2 Citrus clementina cDNA clone C03011G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bp
AAGTGCTGCTGACCCAAACGCAAATGCCAGCCGCAGCCGCAGCCGCTGCC
GCTGCGTCGAGAACTCTCCTCTGCTTCCACCAAAAACTCATAATCTCATC
CATTTACAGCACCACCACCTCAAAAATCACCCACCCATTTCTTCAACGCA
TTAAAAACTCTGCTTTCTTCTCTTCGATCAGCTGCGTTCACCAACTCCAA
TCCGACCCACAGACACAAACCCACGGCCGTCACCCCAATGTCGTCGACAT
TCTCGAGAGAAGAGGCTTGCTTGAATCTATCACCAGTGACAATCTCCGCT
CACTCGCTTCATCCAATGAGAAAACCCTCAAAGTCTACTGCGGGTTTGAC
CCAACTGCTGAGTCCTTACACTTGGGTAACCTCTTGGGTATCATTGTTCT
CTCTTGGTTCCTCCGTTGCGGCCACCAAGCTGTCGCCTTGATCGGTGGCG
CCACCGCTCGTGTTGGTGACCCATCTGGGAAATCAATAGAAAGGCCTGAA
CTCGACATTGATACGTTAGAAAAGAACATTCTTGGAATTAGTAAGACTTT
TTCAACCATTTTTGGTTCTAGTAATGTTGTTATTTTGAATAATTATGATT
GGTGGAAAGATTTTAGCTTCCTGGATTTTCTTAAACAAGTGGGTCGATTT
GCGAGAATTGGGACTATGATTGCTAAGGAGAGTGTGAAGAAGAGGTTGGA
ATCTGAGCAAGGATTGAGCTTTACTGAGTTTAGTTATCAGTTGTTGCAGG
GATATGATTTTC
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