CX291662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_RICTY (Tyrosyl-tRNA synthetase OS=Rickettsia typhi GN=tyrS PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.353e-28 Identity = 64/156 (41.03%), Postives = 94/156 (60.26%), Query Frame = 3 Query: 306 ASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTI--FG--SSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 A + E + Y GFD TA SLH+G+L+ I++L + GH + +IGG T+++GDPSGK + R L + +++N GI K+ S FG + +IL+N +W ++LDFL+ GR + M+ +SVK RLE LSF E +Y LLQ YDF Sbjct: 24 AITQEVKIAAYIGFDCTATSLHIGSLMQIMILRLLQKHGHTPIVIIGGGTSKIGDPSGKEVTRKALTQEDIKRNTAGIKKSLSKFIKFGKDQGDAIILDNAEWLDSLNYLDFLRDFGRHFSVNRMLTMDSVKLRLERSHHLSFLELNYMLLQAYDF 179
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_NOVAD (Tyrosyl-tRNA synthetase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=tyrS PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.353e-28 Identity = 65/180 (36.11%), Postives = 110/180 (61.11%), Query Frame = 3 Query: 237 NVVDILERRGLLESIT-SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 +++ +L RG + +T +D L +LA+ ++ + Y GFDPTA SLH+G+++ I++L + GH+ + L+GG T ++GDPS K R + D + N+ I F G ++ V+++N DW ++ FL++VG+ + M++ +SVK+RL+ EQ LSF EF+Y +LQ YDF Sbjct: 7 SLLRLLSERGYIHQMTDADALDALAA--KQVIPGYIGFDPTAPSLHVGSMVQIMLLRRLQQAGHKPIVLMGGGTGKIGDPSFKDEARKLMTNDVIAANVASIKTVFERFLTFGDGPTDAVMVDNADWLDRLEYIPFLREVGQHFSVNRMLSFDSVKQRLDREQSLSFLEFNYMILQAYDF 184
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_LEUMM (Tyrosyl-tRNA synthetase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=tyrS PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.353e-28 Identity = 71/177 (40.11%), Postives = 105/177 (59.32%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDN--LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 N ++ L+ RG L +T + + ++AS + Y G DPTA+SLHLG+L+ +VL F G +AV +IGGAT +GDP + ER L + L +N GI++ + +FG I+NN DW + DFL+ G+ I M+ K+ V RLE+ G+SFTEF+YQ+LQG D+ Sbjct: 2 NFIEDLKWRGALNQVTDEAGLIEAMASGE---IGAYVGTDPTADSLHLGHLIPFMVLKRFQNAGGKAVIIIGGATGAIGDPR-PTTERQLLSPEQLRQNEKGITEQVTKLFGDEKTAIVNNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRLET--GISFTEFTYQILQGIDY 172
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BORT9 (Tyrosyl-tRNA synthetase OS=Borrelia turicatae (strain 91E135) GN=tyrS PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.767e-28 Identity = 69/174 (39.66%), Postives = 107/174 (61.49%), Query Frame = 3 Query: 243 VDILERRGLLESITSDNLRSLASSNEKTLKV-YCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 ++ILE+RG L+ T NL +L++ +K V Y G D T+ SLH+G+L+ +V++ R GH +AL+GG T ++GDPSGK R L + +EKN+ I I S+ IL+N W + ++++FL+ +G + M+ E+ K+R+ + GLSF EF+YQLLQ YDF Sbjct: 5 LEILEKRGFLKQCT--NLEALSTLMDKERVVFYVGVDATSTSLHIGHLIPFMVMAHLQRQGHIPIALVGGGTTKIGDPSGKDAMRKILSKEDIEKNVKAIRAQLLRIIDFSHGYILDNSAWLDNINYIEFLRDIGVCFSVNRMLGFETYKRRI--KDGLSFIEFNYQLLQSYDF 174
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BEII9 (Tyrosyl-tRNA synthetase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=tyrS PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.767e-28 Identity = 70/175 (40.00%), Postives = 99/175 (56.57%), Query Frame = 3 Query: 249 ILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 IL RG L SD + L Y GFD TA SLH+G+L+ I++L W + G + + L+GG T RVGDPSGK R L ++ +E N GI + FS G ++ ++ +N +W ++DFL+ VGR + M++ +SVK RLE +Q LSF EF+Y Q YDF Sbjct: 14 ILTERGFLHQC-SDPAGLDEKAKSGGLIAYIGFDCTAPSLHVGSLVQIMMLRWLQKTGGKPIVLMGGGTTRVGDPSGKDESRKILTLEEIEANKQGIKQVFSKFVHFGEGKTDALMADNAEWLTALHYIDFLRDVGRHFSVNRMLSMDSVKLRLERDQELSFLEFNYMCCQAYDF 187
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYYM_RAT (Tyrosyl-tRNA synthetase, mitochondrial OS=Rattus norvegicus GN=Yars2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.767e-28 Identity = 62/154 (40.26%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 333 VYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGS-----------SNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 VYCGFDPT +SLH+G+LL ++ L F R GH +AL+GG+TA +GDPSG++ ER L + + N + + T+ + +L+N W++ +DFL VG R+GT++++ SV+ RL+S +G+S EF YQ+LQ YDF Sbjct: 70 VYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVIALVGGSTALLGDPSGRTKEREALSAECVRANARALQRGLETLAANHARLFADGRPWGTFTVLDNAAWFQKQHLMDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFYQVLQAYDF 223
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_RICFE (Tyrosyl-tRNA synthetase OS=Rickettsia felis GN=tyrS PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.308e-28 Identity = 62/154 (40.26%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 312 SNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 + E + Y GFD TA SLH+G+L+ I++L + GH+ + +IGG T+++GDP+ K R L + + KN GI K+ S G S+ ++L+N +W ++LDFL+ G + + M+ +SV+ RLE EQ LSF EF+Y LLQ YDF Sbjct: 26 TKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHGHKPIVIIGGGTSKIGDPTWKDEARKILSKEDIAKNAEGIKKSLSKFIKFGEGESDAIMLDNAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVRLRLEREQHLSFLEFNYMLLQAYDF 179
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BACP2 (Tyrosyl-tRNA synthetase OS=Bacillus pumilus (strain SAFR-032) GN=tyrS PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.308e-28 Identity = 71/178 (39.89%), Postives = 107/178 (60.11%), Query Frame = 3 Query: 240 VVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIER---PELDIDTLEKNILG-ISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 +++ L RGL++ T + + + EK +K+Y GFDPTA+SLH+G+LL I+ L F GH +AL+GGAT +GDPS K ER P ++ I G +S+ G + VI+NNYDW + + FL+ +G+ + M+AK+ V R+E+ G+S+TEFSY +LQ DF Sbjct: 4 LMEELSFRGLIQQQTDEEGLTKLLAEEK-IKLYSGFDPTADSLHIGHLLPILTLRRFQEAGHHPIALVGGATGLIGDPSFKKAERSLNPAEIVEHWSDKIKGQLSQFLDFEAGENPAVIVNNYDWISQMNVITFLRDIGKNFGVNFMLAKDIVSSRIET--GISYTEFSYVILQSLDF 178
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_RICPR (Tyrosyl-tRNA synthetase OS=Rickettsia prowazekii GN=tyrS PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.015e-28 Identity = 66/171 (38.60%), Postives = 100/171 (58.48%), Query Frame = 3 Query: 261 RGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTI--FG--SSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 +G L T D R A + E + Y GFD TA SLH+G+L+ I++L + GH + +IGG T+++GDP+GK + R L + +++N GI K+ S FG + +IL+N +W ++LDFL+ G + + M+ +SVK RL+ LSF E +Y LLQ YDF Sbjct: 10 KGYLNQCT-DLARLSAITQEAKIAAYIGFDCTATSLHIGSLMQIMILRLLQKHGHTPIVIIGGGTSKIGDPAGKDVTRKALTQEDIKRNAEGIKKSLSKFIKFGKDQGDAIILDNAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVKLRLDRSHHLSFLELNYMLLQSYDF 179
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_STAES (Tyrosyl-tRNA synthetase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=tyrS PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.937e-28 Identity = 68/178 (38.20%), Postives = 102/178 (57.30%), Query Frame = 3 Query: 240 VVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 +++ L+ RGL+ T + + L + + TL YCG DPTA+SLH+G+LL + L F GH+ + LIGG T +GDPSGKS ER +E N+ G+S +F ++NN DW S + FL+ G+ + M+ K+S++ RL E G+S+TEF+Y +LQ DF Sbjct: 5 LIEDLKWRGLIYQQTDEEGIEELLNKEQVTL--YCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTESQVEANVKGLSNQMHRLFEFGSDKGAKLVNNKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDF 178 The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bpback to top |