CX291662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_COREF (Tyrosyl-tRNA synthetase OS=Corynebacterium efficiens GN=tyrS PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.771e-28 Identity = 69/178 (38.76%), Postives = 106/178 (59.55%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 N++D L RGL+ T +L +L + ++ + +YCGFDPT SLH G+L+ +++L F + GH + L GGAT +GDP ER DT+ + IS S G ++NN +W + S + FL+ VG+ + TM+A+++VK+RLE++ G+S+TEFSY LLQ DF Sbjct: 4 NIIDELSWRGLINQST--DLDALREATQEPITLYCGFDPTGPSLHAGHLVPLLMLRRFQQAGHNPIVLAGGATGMIGDPRDVG-ERTMNSADTVAEWAERISDQLSRFVDFEGEHAARLVNNAEWTNNMSVVTFLRDVGKHFPLNTMLARDTVKRRLETD-GISYTEFSYMLLQANDF 177
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYYM_MOUSE (Tyrosyl-tRNA synthetase, mitochondrial OS=Mus musculus GN=Yars2 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.496e-27 Identity = 64/166 (38.55%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 297 RSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGS-----------SNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 R A S+ +T VYCGFDPT +SLH+G+LL ++ L F R GH +AL+GG+TA +GDPSG++ R L + + N + + + + + +L+N W+++ +DFL VG R+GT++++ SV+ RL+S +G+S EF YQ+LQ YDF Sbjct: 61 RRRAGSSPQT--VYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVIALVGGSTALLGDPSGRTKGREALSAECVRANAHALRRGLEALAANHARLFADGRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFYQVLQAYDF 224
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_TROWT (Tyrosyl-tRNA synthetase OS=Tropheryma whipplei (strain Twist) GN=tyrS PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.954e-27 Identity = 59/148 (39.86%), Postives = 94/148 (63.51%), Query Frame = 3 Query: 327 LKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 ++ YCGFDPTA SLH+GNL I+++ GH+ +AL+GG+T +GDP ER + +++ + + + S G++ V++NN DW K + LDFL+++G+ R+ M+ K++V RL S +G+S+TEFSYQ+LQ DF Sbjct: 38 IRFYCGFDPTAPSLHVGNLAQILIMRRLQLAGHRPIALVGGSTGLIGDPRPGG-ERQLHSHEQVQEWVRALQQQLSRFLDFKGAAAAVLVNNLDWTKSLTALDFLRELGKHFRVNAMLKKDAVAARLSSTEGISYTEFSYQILQSLDF 184
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_TROW8 (Tyrosyl-tRNA synthetase OS=Tropheryma whipplei (strain TW08/27) GN=tyrS PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.954e-27 Identity = 59/148 (39.86%), Postives = 94/148 (63.51%), Query Frame = 3 Query: 327 LKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 ++ YCGFDPTA SLH+GNL I+++ GH+ +AL+GG+T +GDP ER + +++ + + + S G++ V++NN DW K + LDFL+++G+ R+ M+ K++V RL S +G+S+TEFSYQ+LQ DF Sbjct: 38 IRFYCGFDPTAPSLHVGNLAQILIMRRLQLAGHRPIALVGGSTGLIGDPRPGG-ERQLHSHEQVQEWVRALQQQLSRFLDFKGAAAAVLVNNLDWTKSLTALDFLRELGKHFRVNAMLKKDAVAARLSSTEGISYTEFSYQILQSLDF 184
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_ANAMM (Tyrosyl-tRNA synthetase OS=Anaplasma marginale (strain St. Maries) GN=tyrS PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.552e-27 Identity = 68/178 (38.20%), Postives = 102/178 (57.30%), Query Frame = 3 Query: 243 VDILERRGLLESITSD----NLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSN-VVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 ++ L+ RG L T D L +L + + Y GFD TA SLH+G+L+ I+V+ + + GH+ V L+GG T ++GDPSGK R L + N GI T + + VVI +N +W + +L+FL+++G + M+ +SV+ RL+ +Q LSF EFSY LLQ YDF Sbjct: 8 LNTLQVRGYLHQCTDDVALDELMAL-----QPITAYIGFDCTARSLHIGSLMQIMVMRYLQKFGHKIVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAGILATINKFLNQGDGVVIADNAEWLGEVRYLEFLREIGSKFSVNAMLGLDSVRSRLDRDQNLSFLEFSYVLLQSYDF 180
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_TREPA (Tyrosyl-tRNA synthetase OS=Treponema pallidum GN=tyrS PE=3 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.333e-27 Identity = 71/172 (41.28%), Postives = 95/172 (55.23%), Query Frame = 3 Query: 252 LERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTI--FGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 L+ RG + T + S A + L Y G DPT SLH+G++L + L GH+ LIGG TAR+GDPSGK+ R LD TL+ I F +V +NN DW +++DFL++VG + M+ E+ KKRLE+ GLSF EF+YQLLQ YDF Sbjct: 8 LQARGFIRQCTDLSALS-ARMDAGPLTFYVGVDPTGSSLHVGHMLPMFALKHLCDAGHRGCVLIGGGTARIGDPSGKTSMRKMLDYATLDAYAGAIVAQLDHFLSFDHRHVFYVNNRDWLAHLNYIDFLREVGAHFSVNKMLTYEAYKKRLET--GLSFLEFNYQLLQSYDF 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_EHRCR (Tyrosyl-tRNA synthetase OS=Ehrlichia chaffeensis (strain Arkansas) GN=tyrS PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.333e-27 Identity = 61/177 (34.46%), Postives = 101/177 (57.06%), Query Frame = 3 Query: 243 VDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 + L RG T+ ++ S ++ + Y GFD TA+SLH+G+L+ +++L + GH+ + L+G T ++GDPSGK R L +E+N LGI + G + +++ N +W ++++FL+ +G+ + M+ +SV+ RLE EQ LSF EF+Y LLQ YDF Sbjct: 8 LSFLYSRGYCSQCTNISMLDQLMS-QQCVHAYIGFDCTAKSLHVGSLIQVMILRHLQKFGHKPIILLGDGTTKIGDPSGKDKSRAMLSASEIEENALGIYEVLKKFIVFGDGPHDALLVRNAEWLNGLNYIEFLRDIGKHFSVNNMLTFDSVRLRLEREQNLSFLEFNYMLLQSYDF 183
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY2_STRT2 (Tyrosyl-tRNA synthetase 2 OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=tyrS2 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.333e-27 Identity = 73/170 (42.94%), Postives = 97/170 (57.06%), Query Frame = 3 Query: 252 LERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 L+ RGL++ +SD+L + N L Y G DPTA+SLHLG+ ++ + GHQ + LIGGATA VGDP G S E D+ EK K + I I+NNYDW K+ +DFL++ G+ G M KE VK++ + G+SFTEFSY LLQG DF Sbjct: 7 LQWRGLVKQYSSDSL--IEKLNNGKLTFYIGTDPTADSLHLGHYSSFLIAKRLAKYGHQPIILIGGATALVGDPRGTS----ERDLAEQEKIFDNFEKLKNQIQKIFPYEIVNNYDWTKNIMAIDFLREFGKHITAGYMSNKELVKRQFAT--GISFTEFSYMLLQGMDF 168
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY2_STRT1 (Tyrosyl-tRNA synthetase 2 OS=Streptococcus thermophilus (strain CNRZ 1066) GN=tyrS2 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.333e-27 Identity = 73/170 (42.94%), Postives = 97/170 (57.06%), Query Frame = 3 Query: 252 LERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 L+ RGL++ +SD+L + N L Y G DPTA+SLHLG+ ++ + GHQ + LIGGATA VGDP G S E D+ EK K + I I+NNYDW K+ +DFL++ G+ G M KE VK++ + G+SFTEFSY LLQG DF Sbjct: 7 LQWRGLVKQYSSDSL--IEKLNNGKLTFYIGTDPTADSLHLGHYSSFLIAKRLAKYGHQPIILIGGATALVGDPRGTS----ERDLAEQEKIFDNFEKLKNQIQKIFPYEIVNNYDWTKNIMAIDFLREFGKHITAGYMSNKELVKRQFAT--GISFTEFSYMLLQGMDF 168
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_CAUCR (Tyrosyl-tRNA synthetase OS=Caulobacter crescentus GN=tyrS PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.685e-27 Identity = 67/175 (38.29%), Postives = 101/175 (57.71%), Query Frame = 3 Query: 252 LERRGLLESIT-SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 LE RG + IT +D L + A + Y GFD TA SLH+G+L+ I++L + GH+ + L+GG T +VGDP+GK R L ++ NI GI FS G ++ ++++N W F ++ FL++ G + M+A +SVK RLE EQ ++F EF+Y L+Q DF Sbjct: 15 LEARGYIHQITHADELDTAAQGGP--IVAYIGFDATAPSLHVGSLIQIMLLRRLQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIQANIAGIKTVFSKFLTFGDGPTDAIMVDNDVWLSKFGYVQFLREYGVHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQAVDF 187 The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bpback to top |