CX291662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_ONYPE (Tyrosyl-tRNA synthetase OS=Onion yellows phytoplasma GN=tyrS PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.022e-24 Identity = 64/171 (37.43%), Postives = 98/171 (57.31%), Query Frame = 3 Query: 252 LERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 L+ R L++ +++ ++ L +N+ +K YCGFDPT+ SL +G+L+ I ++ R GH V L+GGAT +GDP ++ ER L ++ +N I I + V +NNY W + FL+ G+ I M++K +V KRL S G+SFTEFSY +LQ DF Sbjct: 7 LKWRNLIKDCSNETQVKELLDNNQ--VKFYCGFDPTSHSLTVGHLVQITMILLMQRQGHLPVILVGGATGLIGDPK-ETEERKLLSLENSLQNAKSIECQLKNILLNKQVEFVNNYQWLSQIDIISFLRNYGKLFNINYMLSKHAVAKRLAS--GISFTEFSYMILQSLDF 172
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYYM_SCHPO (Tyrosyl-tRNA synthetase, mitochondrial OS=Schizosaccharomyces pombe GN=msy1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.684e-24 Identity = 63/161 (39.13%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 333 VYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPEL--------------DIDTLEKNILGISKT----FSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 VY G DPTA SLH+GNL+ ++ L F G +IG ATA++GDPSG+S R ++ + L +IL ++ FS + SS I+ N W+++ L FL VG R+ M+A++SV RL+S GLSF E +YQLLQ YD+ Sbjct: 32 VYLGADPTAASLHVGNLVALMPLVHFFLNGFPVFTVIGDATAQLGDPSGRSTSRKQMAETTRTANSNSIHNQLKDLSSSILSYAQDCNYPFSQMPSSSQWSIVRNSSWYENLKLLKFLSSVGPHVRVSQMLARDSVTTRLQSPSGLSFAELTYQLLQAYDY 192
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_MYCTU (Tyrosyl-tRNA synthetase OS=Mycobacterium tuberculosis GN=tyrS PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.004e-23 Identity = 66/179 (36.87%), Postives = 105/179 (58.66%), Query Frame = 3 Query: 240 VVDILERRGLLESITSDNLRSLASSNEK-TLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTL---EKNILGISKTFSTIFGS-SNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 ++D L RGL+ T +L +LA+ ++ + VY GFDPTA SLH G+L+ ++ L F R GH+ + L GGAT +GDP ER + DT+ + I G + F S ++ NN +W S ++FL+ +G+ + M+A++++++RL E G+S+TEFSY LLQ D+ Sbjct: 5 ILDELSWRGLIAQST--DLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAGHRPIVLAGGATGMIGDPRDVG-ERSLNEADTVAEWTERIRGQLERFVDFDDSPMGAIVENNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLAGE-GISYTEFSYLLLQANDY 179
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_MYCBO (Tyrosyl-tRNA synthetase OS=Mycobacterium bovis GN=tyrS PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.004e-23 Identity = 66/179 (36.87%), Postives = 105/179 (58.66%), Query Frame = 3 Query: 240 VVDILERRGLLESITSDNLRSLASSNEK-TLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTL---EKNILGISKTFSTIFGS-SNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 ++D L RGL+ T +L +LA+ ++ + VY GFDPTA SLH G+L+ ++ L F R GH+ + L GGAT +GDP ER + DT+ + I G + F S ++ NN +W S ++FL+ +G+ + M+A++++++RL E G+S+TEFSY LLQ D+ Sbjct: 5 ILDELSWRGLIAQST--DLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAGHRPIVLAGGATGMIGDPRDVG-ERSLNEADTVAEWTERIRGQLERFVDFDDSPMGAIVENNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLAGE-GISYTEFSYLLLQANDY 179
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_MYCSS (Tyrosyl-tRNA synthetase OS=Mycobacterium sp. (strain MCS) GN=tyrS PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.814e-23 Identity = 67/180 (37.22%), Postives = 104/180 (57.78%), Query Frame = 3 Query: 237 NVVDILERRGLL-ESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTL---EKNILGISKTFSTIFGS-SNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 +++D L+ RGL+ +S D L + ++ TL Y GFDPTA SLH G+L+ ++ L F + GH+ + L GGAT +GDP ER DT+ I G + F S + ++ NN W S ++FL+ VG++ + M+ +++V++RLE E G+S+TEFSY LLQ D+ Sbjct: 3 SILDELDWRGLIAQSTDRDALAAELAAGPMTL--YSGFDPTAPSLHAGHLVPLLTLRRFQQAGHRPIVLAGGATGMIGDPRDTG-ERTLQTADTVADWADRIRGQLERFVEFDESPTGAIVENNLSWTGALSTIEFLRDVGKYFSVNVMLDRDTVRRRLEGE-GISYTEFSYMLLQANDY 178
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_MYCSK (Tyrosyl-tRNA synthetase OS=Mycobacterium sp. (strain KMS) GN=tyrS PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.814e-23 Identity = 67/180 (37.22%), Postives = 104/180 (57.78%), Query Frame = 3 Query: 237 NVVDILERRGLL-ESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTL---EKNILGISKTFSTIFGS-SNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 +++D L+ RGL+ +S D L + ++ TL Y GFDPTA SLH G+L+ ++ L F + GH+ + L GGAT +GDP ER DT+ I G + F S + ++ NN W S ++FL+ VG++ + M+ +++V++RLE E G+S+TEFSY LLQ D+ Sbjct: 3 SILDELDWRGLIAQSTDRDALAAELAAGPMTL--YSGFDPTAPSLHAGHLVPLLTLRRFQQAGHRPIVLAGGATGMIGDPRDTG-ERTLQTADTVADWADRIRGQLERFVEFDESPTGAIVENNLSWTGALSTIEFLRDVGKYFSVNVMLDRDTVRRRLEGE-GISYTEFSYMLLQANDY 178
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_MYCSJ (Tyrosyl-tRNA synthetase OS=Mycobacterium sp. (strain JLS) GN=tyrS PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.814e-23 Identity = 67/180 (37.22%), Postives = 104/180 (57.78%), Query Frame = 3 Query: 237 NVVDILERRGLL-ESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTL---EKNILGISKTFSTIFGS-SNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 +++D L+ RGL+ +S D L + ++ TL Y GFDPTA SLH G+L+ ++ L F + GH+ + L GGAT +GDP ER DT+ I G + F S + ++ NN W S ++FL+ VG++ + M+ +++V++RLE E G+S+TEFSY LLQ D+ Sbjct: 3 SILDELDWRGLIAQSTDRDALAAELAAGPMTL--YSGFDPTAPSLHAGHLVPLLTLRRFQQAGHRPIVLAGGATGMIGDPRDTG-ERTLQTADTVADWADRIRGQLERFVEFDESPTGAIVENNLSWTGALSTIEFLRDVGKYFSVNVMLDRDTVRRRLEGE-GISYTEFSYMLLQANDY 178
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_PROAC (Tyrosyl-tRNA synthetase OS=Propionibacterium acnes GN=tyrS PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.981e-23 Identity = 67/178 (37.64%), Postives = 104/178 (58.43%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDP---SGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 +++D LE RGL+ T D A + + Y GFDPTA+SLH+G+L+ ++++ GH+ + L+GGAT +GDP + + E+ + +E +SK T G + I+NNYDW ++ LD L+ VG+ + M+A++ V +RLES G+S+TEFSY LLQ DF Sbjct: 3 DLLDDLEWRGLVADST-DREALEAHLAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQERGHKPLLLVGGATGLIGDPKMTGERHMNDREVVAEWVESIKDQVSKYVDT-DGRNAAQIVNNYDWTVKYTALDLLRDVGKHFSVNRMLARDVVARRLES--GISYTEFSYVLLQSLDF 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_MYCFO (Tyrosyl-tRNA synthetase OS=Mycobacterium fortuitum GN=tyrS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.505e-23 Identity = 65/178 (36.52%), Postives = 101/178 (56.74%), Query Frame = 3 Query: 240 VVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEK---NILGISKTFSTIFGS-SNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 ++D L+ RGL+ T + +N + VY GFDPTA SLH G+L+ ++ L F R GH+ + L GGAT +GDP ER DT+ I G + F + + ++ NN +W S ++FL+ +G++ + M+ +E+V++RLE + G+S+TEFSY LLQ DF Sbjct: 5 ILDELDWRGLIAQSTDRETLANDLANGP-MTVYSGFDPTAPSLHAGHLVPLLTLRRFQRAGHRPIVLAGGATGMIGDPRDTG-ERTLNTADTVADWAGRIRGQLERFVEFDDTPTGAIVENNLNWTGRLSAIEFLRDLGKYFSVNVMLDRETVRRRLEGD-GISYTEFSYMLLQANDF 179
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYYM_PODAN (Tyrosyl-tRNA synthetase, mitochondrial OS=Podospora anserina GN=YTS1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.496e-23 Identity = 60/213 (28.17%), Postives = 105/213 (49.30%), Query Frame = 3 Query: 186 VHQLQSDPQTQTH----GRHPNVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNV-----------------VILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 + Q Q+D + + G + D+ RG ++ + K + Y G DPTA SLH+G+LL ++ + W G+ LIGGATA++GDP+ + + R L L N+ I ++ NV ++NN WW ++ LK++G R+G ++++++VK ++ G+SF+EF+Y L+QG+D+ Sbjct: 46 IDQAQADWEERAEKIKKGEIQHTWDMFVERGYVKDTAGSHETIRKLMLHKRIGAYTGIDPTAPSLHIGHLLPLMPIFWMYMHGYAGYTLIGGATAKIGDPTDRLVSRTPLKRTDLTMNLTKIHYQLKALW--MNVEEQARRRGFEKDWAWKRAVVNNSTWWNSLPLIEVLKRLGDSMRMGPLLSRDTVKNKMSKGDGMSFSEFTYPLMQGWDW 256 The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bpback to top |