CX291662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_XANOR (Tyrosyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae GN=tyrS PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.394e-17 Identity = 54/166 (32.53%), Postives = 82/166 (49.40%), Query Frame = 3 Query: 261 RGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 RG E + D L + +S L+V GFDPTA LHLG+ + + + F + GHQ + LIG T +GDPSGK+ R L + + N + I + N +W+ S D +K + + M+ ++ KR S+Q ++ EF Y L+QGYD Sbjct: 13 RGAEEILKLDQLEARLTSGVP-LRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILDRERTEVRFNSEWFGQMSAADMIKLSAQHT-VARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYD 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_XANOM (Tyrosyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=tyrS PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.394e-17 Identity = 54/166 (32.53%), Postives = 82/166 (49.40%), Query Frame = 3 Query: 261 RGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 RG E + D L + +S L+V GFDPTA LHLG+ + + + F + GHQ + LIG T +GDPSGK+ R L + + N + I + N +W+ S D +K + + M+ ++ KR S+Q ++ EF Y L+QGYD Sbjct: 13 RGAEEILKLDQLEARLTSGVP-LRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILDRERTEVRFNSEWFGQMSAADMIKLSAQHT-VARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYD 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_PASMU (Tyrosyl-tRNA synthetase OS=Pasteurella multocida GN=tyrS PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.394e-17 Identity = 53/167 (31.74%), Postives = 83/167 (49.70%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG+ E ++ +L N + L+V G DPTA +HLG+ + + L F + GH+ + LIG T VGDPSGK+ RP L D + +N + I I+ N W + ++ + + M+ ++ KKR + Q ++ EF Y LLQGYD Sbjct: 12 KRGVDEILSEADLIEKLKEN-RPLRVKLGADPTAPDIHLGHTVVLNKLRQFQQFGHEVIFLIGDFTGMVGDPSGKNTTRPPLSRDDVLRNAETYKQQIYKILDPQKTRIVFNSSWLGELGTEGMIRLTSNYT-VARMLERDDFKKRFSNNQPIAIHEFIYPLLQGYD 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_PROMT (Tyrosyl-tRNA synthetase OS=Prochlorococcus marinus (strain NATL2A) GN=tyrS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.127e-17 Identity = 55/162 (33.95%), Postives = 85/162 (52.47%), Query Frame = 3 Query: 303 LASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNI------LGISK----TFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 L+S ++K L+V G DPT +H+G+ + L F GH A+ +IG TAR+GDP+GKS R +L D ++ N LG+ K + S + I N +W ++ + ++ + + +G M+AKE R +S +S EF Y LLQGYD Sbjct: 38 LSSVDKKPLRVKLGIDPTGTDIHIGHSILFRKLRAFQDAGHTAILIIGDFTARIGDPTGKSKTRIQLSKDEVQSNALNYLEQLGLGKDPKDSLLDFSIPSRIEIRRNSEWLENLNLSKVIELLSN-STVGQMLAKEDFSNRYKSGTPISLHEFLYPLLQGYD 198
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_NITMU (Tyrosyl-tRNA synthetase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=tyrS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.084e-17 Identity = 51/167 (30.54%), Postives = 80/167 (47.90%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG E + D L + N + L++ GFDPTA LHLG+ + + + GH A+ LIG T +GDPSGK+ RP L + + +N I ++ N W + D +K + M+ ++ KR +S + ++ EF Y L+QGYD Sbjct: 13 KRGCSELLLEDELEQKLAQN-RPLRIKAGFDPTAPDLHLGHTVLLNKMRHLQDLGHHALFLIGDFTGMIGDPSGKNTTRPPLSREQVAENAKSYQDQVFRILKPEQTEVVFNSAWMDRLNAADLIKLAATHT-VARMLERDDFGKRYQSNKPIAIHEFLYPLIQGYD 177
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_IDILO (Tyrosyl-tRNA synthetase OS=Idiomarina loihiensis GN=tyrS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.084e-17 Identity = 55/166 (33.13%), Postives = 80/166 (48.19%), Query Frame = 3 Query: 261 RGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 RG E + L +S K L V GFDPTA LHLG+ + I L F GH+ V LIG T +GDP+GK++ R L + + N + I + I N +W D +K R + M+ ++ KKR ++ Q ++ EF Y L+QG+D Sbjct: 14 RGAEEVLLEQELAEKLASG-KPLTVKAGFDPTAPDLHLGHTVLINKLRVFQDFGHKVVFLIGDFTGMIGDPTGKNVTRKPLTTEQVIANAETYKEQVFKILDPAKTEIRFNSEWMSKMGAADMIKLAAR-QTVARMLERDDFKKRYQNNQSIAIHEFLYPLVQGWD 177
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_XYLFT (Tyrosyl-tRNA synthetase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=tyrS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.334e-17 Identity = 53/174 (30.46%), Postives = 87/174 (50.00%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 N + ++ER G E + D L S + L++ GFDPT+ LHLG+ + + + F GHQ V LIG T +GDP+GK++ R L + + N + + + N +W++ S +D +K + + M+ ++ KR S+Q + EF Y L+QGYD Sbjct: 6 NSIALIER-GANEILKFDELERRLRSG-RPLRIKAGFDPTSPDLHLGHTVLLNKMRQFQDLGHQVVFLIGDFTGMIGDPTGKNVTRKPLSREDVLANASTYEDQVFKVLDRTLTEVRFNSEWFEKMSAVDMIKLAAQHT-VARMLERDDFAKRFASQQPIVIHEFLYPLIQGYD 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_XANCP (Tyrosyl-tRNA synthetase OS=Xanthomonas campestris pv. campestris GN=tyrS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.334e-17 Identity = 52/166 (31.33%), Postives = 82/166 (49.40%), Query Frame = 3 Query: 261 RGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 RG E + + L + +S L+V GFDPTA LHLG+ + + + F GHQ + LIG T +GDPSGK++ R L + + N + I + + N +W+ S D +K + + M+ ++ KR +Q ++ EF Y L+QGYD Sbjct: 13 RGAEEILKLEQLEARLTSGVP-LRVKAGFDPTAPDLHLGHTVLLNKMRQFQELGHQVIFLIGDFTGMIGDPSGKNVTRKPLSREDVLANARTYEEQVFKILDRTRTEVRFNSEWFGQMSAADMIKLSAQHT-VARMLERDDFAKRFAGQQPIAIHEFLYPLVQGYD 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_XANC8 (Tyrosyl-tRNA synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=tyrS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.334e-17 Identity = 52/166 (31.33%), Postives = 82/166 (49.40%), Query Frame = 3 Query: 261 RGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 RG E + + L + +S L+V GFDPTA LHLG+ + + + F GHQ + LIG T +GDPSGK++ R L + + N + I + + N +W+ S D +K + + M+ ++ KR +Q ++ EF Y L+QGYD Sbjct: 13 RGAEEILKLEQLEARLTSGVP-LRVKAGFDPTAPDLHLGHTVLLNKMRQFQELGHQVIFLIGDFTGMIGDPSGKNVTRKPLSREDVLANARTYEEQVFKILDRTRTEVRFNSEWFGQMSAADMIKLSAQHT-VARMLERDDFAKRFAGQQPIAIHEFLYPLVQGYD 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_PELLD (Tyrosyl-tRNA synthetase OS=Pelodictyon luteolum (strain DSM 273) GN=tyrS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.334e-17 Identity = 54/166 (32.53%), Postives = 82/166 (49.40%), Query Frame = 3 Query: 270 LESITSDNLRSLASSNEKT---LKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +E I+S L + KT LKV G DP+ LHLG+ + + L F GH+A+ +IG TA +GDPSGKS RP+L + +N + S I I N DW + +F D ++ + + M+ ++ ++R S + +S EF Y L Q D Sbjct: 18 VEIISSAELEQKIQHSIKTGAPLKVKLGADPSRPDLHLGHSVVLRKLREFQDLGHEAILIIGDFTAMIGDPSGKSKTRPQLSAEEARENGASYFEQASKILDPHKTTICYNADWLGNMTFADVIRLSSHYT-VARMLERDDFERRYRSSEPISIHEFLYPLAQAMD 182 The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bpback to top |