CX291662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY2_CLOAB (Tyrosyl-tRNA synthetase 2 OS=Clostridium acetobutylicum GN=tyrS2 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.006e-15 Identity = 50/170 (29.41%), Postives = 82/170 (48.24%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASSNEKT---LKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 ++G E I + L+ EK L V G DP+A +HLG+ + + L GH+ V +IG T +GDP+GKS R +L + KN K I + + N W + +F + ++ ++ + M+ +E KKR +++Q + EF Y L+Q YD Sbjct: 12 KKGAEEIIDAKELKEKLIKAEKENTQLVVKLGLDPSAPDIHLGHAVVLRKLKQLQDLGHKIVIIIGDFTGMIGDPTGKSKTRKQLSSQQVMKNAETYEKQIFKILDRNKTDLRFNSQWLEKLNFKEVIELASKYT-VARMLEREDFKKRFKNQQSIGIHEFFYPLMQAYD 180
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_SULDN (Tyrosyl-tRNA synthetase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=tyrS PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15 Identity = 53/170 (31.18%), Postives = 82/170 (48.24%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASS---NEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG E I + L + +T V GFDPTA LHLG+ + + L+ F + G + LIG TA++GDPSGKS R L + + +N + I +S ++ N +W + F + M+ ++ KR +S ++ +EF Y LLQGYD Sbjct: 10 QRGCAEIIDEPRVEKLLKAYFEKGETYTVKAGFDPTAPDLHLGHTVLLQKLAIFQKYGARVQFLIGDFTAQIGDPSGKSATRKILSTEDILENAKSYKEQVFKILDASKTDVVFNSEWLNALGASGMITLTTTF-NVARMLERDDFDKRYKSGTSIAISEFLYPLLQGYD 178
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_RALEJ (Tyrosyl-tRNA synthetase OS=Ralstonia eutropha (strain JMP134) GN=tyrS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.927e-15 Identity = 55/180 (30.56%), Postives = 89/180 (49.44%), Query Frame = 3 Query: 234 PNVVDILE--RRGLLES-ITSDNLRSLASSNEK--TLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 P+V+ LE +RG E I ++ L+ LA S L++ G DPTA +H+G+ + + L GHQ + LIG T+ +GDPSG++ RP L + +E N + S + + I N +W ++ ++ + M+ ++ KR S +S EF Y L+QGYD Sbjct: 16 PSVMHALEVSKRGCDELLIEAEWLQKLARSEATGVPLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDLGHQVIFLIGDFTSTIGDPSGRNSTRPPLTREQIEANAQTYYRQASLVLDPARTEIRYNSEWCDPLGARGMIQLAAKYT-VARMMERDDFTKRFRSGIPISVHEFLYPLMQGYD 194
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BURP1 (Tyrosyl-tRNA synthetase OS=Burkholderia pseudomallei (strain 1710b) GN=tyrS PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.927e-15 Identity = 50/170 (29.41%), Postives = 83/170 (48.82%), Query Frame = 3 Query: 258 RRGLLESITSDNL-RSLASS--NEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG+ E + + + LA S +K L++ G DPTA +HLG+ + + + GH + LIG T+ +GDPSG++ RP L + +E N + + + + I N +W +K R+ + M+ +E KR + +S EF Y L+QGYD Sbjct: 25 KRGVDELLIEEEFAQKLAKSAATDKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRAKTEIRYNSEWSMPLGADGMIKLASRYT-VARMLEREDFTKRFQGGIPISIHEFLYPLMQGYD 193
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY2_BACSU (Tyrosyl-tRNA synthetase 2 OS=Bacillus subtilis GN=tyrS2 PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.927e-15 Identity = 43/144 (29.86%), Postives = 75/144 (52.08%), Query Frame = 3 Query: 327 LKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 LK+ G DP+A +HLG+ + + L F GH LIG T ++GDP+GKS R +L + ++ N + F + V + N W K + D ++ G+ + ++ ++ ++R+ ++ +S EF Y L+QGYD Sbjct: 50 LKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLLIGDFTGKIGDPTGKSAARKQLTDEEVQHNAKTYFEQFGKVLDPEKVELHYNSKWLKTLNLEDVIELAGKIT-VARLMERDDFEERIAMQKPISLHEFFYPLMQGYD 192
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_THIDA (Tyrosyl-tRNA synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=tyrS PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.822e-15 Identity = 43/146 (29.45%), Postives = 75/146 (51.37%), Query Frame = 3 Query: 321 KTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 + L++ GFDPTA LHLG+ + + L F GH+ V LIG T +GDP+GK+ RP L + + +N + + + + N +W + + ++ + M+ ++ +KR S++ ++ EF Y L+QGYD Sbjct: 29 RPLRIKAGFDPTAPDLHLGHTVLLNKLRQFQVLGHRIVFLIGDFTGMIGDPTGKNATRPPLTREAVAENAKTYQEQVFKVLDPALTEVRFNSEWMEGLGSVGMIRLAATHT-VARMLERDDFQKRYSSQKPIAIHEFLYPLIQGYD 173
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_THEEB (Tyrosyl-tRNA synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=tyrS PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.822e-15 Identity = 50/160 (31.25%), Postives = 78/160 (48.75%), Query Frame = 3 Query: 288 DNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFG---SSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +NL + ++ L++ G DPT +HLG+ + + L F GH AV +IG TA++GDP+GKS R +L + + N+ + I + I N +W L+ +G +G M+AKE +R E + EF Y L+QGYD Sbjct: 31 ENLWAYLRQTQRPLRIKFGIDPTGSEIHLGHSIVLRKLRQFQDAGHCAVLIIGDFTAQIGDPTGKSEVRKQLTPEEVAANVQTYLEQVRPILDFETPGRLEIRYNSEWLAKLDLRKVLELLGTMT-VGQMLAKEGFAERYAKETPIFLHEFLYPLMQGYD 189
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_SHEON (Tyrosyl-tRNA synthetase OS=Shewanella oneidensis GN=tyrS PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.822e-15 Identity = 55/168 (32.74%), Postives = 80/168 (47.62%), Query Frame = 3 Query: 258 RRGLLESIT-SDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 RRG E + SD L L + L++ G DPTA +HLG+ + + L F GH+ + LIG T VGDPSGK+ RP L + + N + I + I N W + ++ + + M+ ++ KKR S Q ++ EF Y LLQGYD Sbjct: 12 RRGTDEILLESDLLEKLKKG--RPLRIKLGADPTAPDIHLGHTVILNKLRLFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTRIEFNSSWLEPLGAAGMIRLASQ-QTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYD 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BURPS (Tyrosyl-tRNA synthetase OS=Burkholderia pseudomallei GN=tyrS PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.822e-15 Identity = 50/170 (29.41%), Postives = 82/170 (48.24%), Query Frame = 3 Query: 258 RRGLLESITSDNL-RSLASS--NEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG+ E + + + LA S +K L++ G DPTA +HLG+ + + + GH + LIG T+ +GDPSG++ RP L + +E N + + + I N +W +K R+ + M+ +E KR + +S EF Y L+QGYD Sbjct: 25 KRGVDELLIEEEFAQKLAKSAATDKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTEIRYNSEWSMPLGADGMIKLASRYT-VARMLEREDFTKRFQGGIPISIHEFLYPLMQGYD 193
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY2_VIBCH (Tyrosyl-tRNA synthetase 2 OS=Vibrio cholerae GN=tyrS2 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.992e-15 Identity = 51/167 (30.54%), Postives = 79/167 (47.31%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG+ E I + L + N + L++ G DPTA +HLG+ + + L F GH LIG T VGDP+GK+ RP L + + +N + I + I N +W ++ + M+ ++ KKR + Q ++ EF Y LLQGYD Sbjct: 12 KRGVEELIPEEELIAKLKEN-RPLRIKLGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTKIQFNSEWLSKLGAEGMIRLASN-QTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQGYD 176 The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bpback to top |