CX291662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_SYNJA (Tyrosyl-tRNA synthetase OS=Synechococcus sp. (strain JA-3-3Ab) GN=tyrS PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.520e-15 Identity = 56/180 (31.11%), Postives = 86/180 (47.78%), Query Frame = 3 Query: 234 PNVVDILERRGLLESITSDN--LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFG---SSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 P + +I +R G+ E L ++ ++ L+V G DPT LHLG+ + + L F GH A+ LIG TA VGDP+G+S RP L +E+N + I + + N +W + + ++ + +G M+AKE +R S + EF Y LLQGYD Sbjct: 19 PRIAEITQR-GVAEVFPGGAAALAERLATTDRPLRVKLGIDPTRPDLHLGHAVVLRKLRQFQDAGHVAILLIGDFTALVGDPTGQSEARPRLTPAEVEENARTYLEQAGKILDFETPGRLEVRRNSEWLARLTLSELIELQAQMT-VGQMLAKEDFAQRYRSGTPIYLHEFLYPLLQGYD 196
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_SYNP6 (Tyrosyl-tRNA synthetase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tyrS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15 Identity = 49/159 (30.82%), Postives = 77/159 (48.43%), Query Frame = 3 Query: 291 NLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKN---ILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +L + ++ L++ G DPT +HLG+ + L F GH AV +IG TAR+GDP+GKS R +L + +++N L + + I N +W L+ +G +G M+AKE +R + + EF Y L+QGYD Sbjct: 28 SLLARLQQGDRPLRIKLGIDPTGSDIHLGHSIIFRKLRQFQDAGHTAVLIIGDFTARIGDPTGKSEVRRQLTAEDVQRNAETYLDQLRPILDFETPGRLEIRYNSEWLAGLDLAKILELLGTMT-VGQMLAKEGFSERYDKGTPVYLHEFLYPLMQGYD 185
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_SYNJB (Tyrosyl-tRNA synthetase OS=Synechococcus sp. GN=tyrS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15 Identity = 57/182 (31.32%), Postives = 87/182 (47.80%), Query Frame = 3 Query: 228 RHPNVVDILERRGLLESITSDN--LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFG---SSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 R P + I+ER G+ E L + ++ L+V G DPT LHLG+ + + L F GH A+ LIG TA VGDP+G+S RP L +E+N + I + + N +W + + ++ + +G M+AKE +R ++ + EF Y LLQGYD Sbjct: 13 RDPLIAQIVER-GVAEIFPGGAAALAERLAQADRPLRVKLGIDPTRPDLHLGHSVVLRKLRQFQDAGHVAILLIGDFTALVGDPTGQSEARPRLTPAEVEENARTYLEQAGKILDFETPGRLEVRRNSEWLAHLTLSELIELQAQMT-VGQMLAKEDFAQRYQAGTPVYLHEFLYPLLQGYD 192
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_SYNE7 (Tyrosyl-tRNA synthetase OS=Synechococcus elongatus (strain PCC 7942) GN=tyrS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15 Identity = 49/159 (30.82%), Postives = 77/159 (48.43%), Query Frame = 3 Query: 291 NLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKN---ILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +L + ++ L++ G DPT +HLG+ + L F GH AV +IG TAR+GDP+GKS R +L + +++N L + + I N +W L+ +G +G M+AKE +R + + EF Y L+QGYD Sbjct: 28 SLLARLQQGDRPLRIKLGIDPTGSDIHLGHSIIFRKLRQFQDAGHTAVLIIGDFTARIGDPTGKSEVRRQLTAEDVQRNAETYLDQLRPILDFETPGRLEIRYNSEWLAGLDLAKILELLGTMT-VGQMLAKEGFSERYDKGTPVYLHEFLYPLMQGYD 185
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_SALRD (Tyrosyl-tRNA synthetase OS=Salinibacter ruber (strain DSM 13855) GN=tyrS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15 Identity = 49/170 (28.82%), Postives = 83/170 (48.82%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASSNEKT---LKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 RRG E + D L ++ +T L V G DP+ LHLG+ + + L F GH+AV ++G T +GDPSG+S RP+L ++ ++ + + + + I N +W + F D ++ + + M+ ++ +R E+ Q +S EF Y L Q D Sbjct: 14 RRGAEEIVPEDELAEKLRTSRETDTPLTVKLGCDPSRPDLHLGHTVVLRKLRQFQDFGHRAVLIVGDFTGMIGDPSGRSKTRPQLTLEETREHGQSYYEQATRVLDPNKTEIRYNSEWLDEMRFSDVIELAAQ-QTVAQMLKRDDFNERYEAGQPISLHEFLYPLAQARD 182
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_DEIRA (Tyrosyl-tRNA synthetase OS=Deinococcus radiodurans GN=tyrS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15 Identity = 50/171 (29.24%), Postives = 83/171 (48.54%), Query Frame = 3 Query: 252 LERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGS--SNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 L +RG+++ ++ ++L+ E L+V G DPT LHLG+ + + + F GH+ + LIG TA +GDPSGKS RP L ++ N I + I N +W + + D + ++ + ++ ++ KRL + +S E Y L QGYD Sbjct: 18 LLKRGVVDLVSEEDLKRKIEKGEP-LRVKLGADPTRPDLHLGHAVILRKMRQFQDLGHKVIMLIGDFTATIGDPSGKSKTRPPLSLEEARANAESYLAQCRLILRQEPEALEIRYNSEWLEQLGYKDIIGLAAKYT-VARILERDDFTKRLSAGTPISMHELLYPLTQGYD 186
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY2_VIBPA (Tyrosyl-tRNA synthetase 2 OS=Vibrio parahaemolyticus GN=tyrS2 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15 Identity = 52/168 (30.95%), Postives = 81/168 (48.21%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASSNE-KTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG+ E I + L +A E + L++ G DPTA +HLG+ + L F GH+ LIG TA VGDP+GK+ RP L + + +N + I + I N +W + ++ + M+ ++ KKR Q ++ EF Y LLQG+D Sbjct: 12 KRGVEELIPEEEL--IAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKLRLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPAKTKIQFNSEWLSELGAEGMIRLAAN-QTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQGWD 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BURMA (Tyrosyl-tRNA synthetase OS=Burkholderia mallei GN=tyrS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.112e-14 Identity = 48/164 (29.27%), Postives = 78/164 (47.56%), Query Frame = 3 Query: 267 LLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 L+E + L A++ K L++ G DPTA +HLG+ + + + GH + LIG T+ +GDPSG++ RP L + +E N + + + I N +W +K R+ + M+ +E KR + +S EF Y L+QGYD Sbjct: 32 LIEEEFAQKLAKSAATG-KPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTEIRYNSEWSMPLGADGMIKLASRYT-VARMLEREDFTKRFQGGIPISIHEFLYPLMQGYD 193
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_AQUAE (Tyrosyl-tRNA synthetase OS=Aquifex aeolicus GN=tyrS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.112e-14 Identity = 50/184 (27.17%), Postives = 84/184 (45.65%), Query Frame = 3 Query: 207 PQTQTHGRHPNVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 P+ Q V+I+E LL+ + + L+V GFDPTA LHLG+++ + L F + GH+ +IG TA +GDP+G+S RP L + + +N + ++ N W ++ ++ ++ + M+ +E KR + + EF Y LLQ YD Sbjct: 3 PEEQLRIIKEGTVEIIEEEELLKKLKEG----------RPLRVKAGFDPTAPDLHLGHVVLLQKLRQFQQLGHEVFFIIGDFTAMIGDPTGRSQTRPPLSREQVLENAKTYEHQVFKVLIPEKTTVVFNSTWLEELGTKGLIELCAKYT-VARMLEREDFSKRFKEGIPIYIHEFIYPLLQAYD 175
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_CAMJE (Tyrosyl-tRNA synthetase OS=Campylobacter jejuni GN=tyrS PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.452e-14 Identity = 51/174 (29.31%), Postives = 85/174 (48.85%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASS---NEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFST----IFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG E I + + +L + + + GFDPTA LHLG+ + + +++ + G LIG T ++GDPSGKS R +LD ++ +L +KT+ T + I N W + ++ F+ + M+ ++ KR + + +S EF Y LLQGYD Sbjct: 11 KRGCAELIDEERIENLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLD----KEQVLINAKTYKTQVFKVLDKEKTQIKFNSTWLNELGAAGIVELTSTFS-VARMLERDDFTKRFKEQSPISICEFLYPLLQGYD 179 The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bpback to top |