CX291662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BURTA (Tyrosyl-tRNA synthetase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=tyrS PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.452e-14 Identity = 44/151 (29.14%), Postives = 73/151 (48.34%), Query Frame = 3 Query: 306 ASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +++ K L++ G DPTA +HLG+ + + + GH + LIG T+ +GDPSG++ RP L + +E N + + + I N +W +K R+ + M+ +E KR + +S EF Y L+QGYD Sbjct: 44 SAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTEIRYNSEWSMPLGADGMIKLASRYT-VARMLEREDFTKRFQGGIPISIHEFLYPLMQGYD 193
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_THEMA (Tyrosyl-tRNA synthetase OS=Thermotoga maritima GN=tyrS PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.897e-14 Identity = 52/184 (28.26%), Postives = 84/184 (45.65%), Query Frame = 3 Query: 207 PQTQTHGRHPNVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 P+ Q NVVD++ LL+ I + L+V G DP+ LHLG+ + + L F GH V +IG TAR+GDPSG++ RP L + + +N + I + N +W +F D + ++ + M+ ++ KR + ++ +EF Y L Q YD Sbjct: 3 PEEQVKILKRNVVDLISEEELLDRI----------KRKGKLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGHTVVLIIGDFTARIGDPSGRNETRPMLTKEEVLENAKTYQEQAFKILDPKRTELRFNGEWLDRMTFADVIILASKYT-VARMLERDDFAKRFKEGIPIAISEFLYPLAQAYD 175
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_GEOMG (Tyrosyl-tRNA synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=tyrS PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.897e-14 Identity = 49/170 (28.82%), Postives = 80/170 (47.06%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASSNEKT---LKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG E + L + T L++ GFDPTA LHLG+ + + + F + GH+ LIG T +GDP+GKS R L + + KN + I ++ N +W + D + + + + M+ ++ KR ++ +S EF Y L+QGYD Sbjct: 11 KRGATEILLEKELEEKIEKSLSTGVPLRIKAGFDPTAPDLHLGHTVLLHKMRQFQQLGHEVCFLIGDFTGMIGDPTGKSETRKALTREDVLKNAETYKEQVFKILDPKKTRVVFNSEWLGKMTASDMIGLAAQ-STVARMLERDDFGKRFANQLPISIHEFLYPLIQGYD 179
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_CAMJR (Tyrosyl-tRNA synthetase OS=Campylobacter jejuni (strain RM1221) GN=tyrS PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.897e-14 Identity = 51/174 (29.31%), Postives = 84/174 (48.28%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASS---NEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFST----IFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG E I + + L + + + GFDPTA LHLG+ + + +++ + G LIG T ++GDPSGKS R +LD ++ +L +KT+ T + I N W + ++ F+ + M+ ++ KR + + +S EF Y LLQGYD Sbjct: 11 KRGCAELIDEERIEKLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLD----KEQVLINAKTYETQVFKVLDKEKTQIKFNSTWLNELGAAGIVELTSTFS-VARMLERDDFTKRFKEQSPISICEFLYPLLQGYD 179
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_ANAVT (Tyrosyl-tRNA synthetase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tyrS PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.897e-14 Identity = 53/162 (32.72%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 288 DNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKN---ILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFA--RIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 ++L ++ ++ L+V G DPT +HLG+ + + L F GH AV +IG TAR+GDP+GKS R +L + +++N L + + + N +W S LD K A +G M+AKE R + E + EF Y L+QGYD Sbjct: 27 ESLEKRLATTDRPLRVKYGIDPTGADIHLGHSIPMRKLRGFQDAGHTAVLIIGDFTARIGDPTGKSEMRRQLTEEDVKQNAQTYLDQVRPILDFDTPGRLEVRYNSEW---LSRLDLGKITELLATMTVGQMLAKEGFADRYKKENPIFLHEFLYPLMQGYD 185
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_ANASP (Tyrosyl-tRNA synthetase OS=Anabaena sp. (strain PCC 7120) GN=tyrS PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.897e-14 Identity = 53/162 (32.72%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 288 DNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKN---ILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFA--RIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 ++L ++ ++ L+V G DPT +HLG+ + + L F GH AV +IG TAR+GDP+GKS R +L + +++N L + + + N +W S LD K A +G M+AKE R + E + EF Y L+QGYD Sbjct: 27 ESLEKRLATTDRPLRVKYGIDPTGADIHLGHSIPMRKLRGFQDAGHTAVLIIGDFTARIGDPTGKSEMRRQLTEEDVKQNAQTYLDQVRPILDFDTPGRLEVRYNSEW---LSRLDLGKITELLATMTVGQMLAKEGFADRYKKENPIFLHEFLYPLMQGYD 185
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_RALSO (Tyrosyl-tRNA synthetase OS=Ralstonia solanacearum GN=tyrS PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.478e-14 Identity = 42/144 (29.17%), Postives = 72/144 (50.00%), Query Frame = 3 Query: 327 LKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 L++ G DPTA +H+G+ + + + GHQ + LIG T+ +GDPSG++ RP L + +E N + S + S I N +W ++ ++ + M+ ++ KR ++ +S EF Y L+QGYD Sbjct: 31 LRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDPSKTEIRYNSEWCDPLGARGIIQLAAKYT-VARMMERDDFTKRYKAGVPISVHEFLYPLMQGYD 173
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY2_VIBVY (Tyrosyl-tRNA synthetase 2 OS=Vibrio vulnificus (strain YJ016) GN=tyrS2 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.478e-14 Identity = 52/168 (30.95%), Postives = 80/168 (47.62%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASSNE-KTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG+ E I + L +A E + L++ G DPTA +HLG+ + + L F GH LIG T VGDP+GK+ RP L + + +N + I + I N +W + ++ + M+ ++ KKR Q ++ EF Y LLQGYD Sbjct: 12 KRGVEELIPEEEL--IAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRAFQDLGHDVTFLIGDFTGMVGDPTGKNSTRPPLTREDVLRNAETYKQQVFKILDPAKTKIQFNSEWLSELGAEGMIRLAAN-QTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQGYD 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY2_VIBVU (Tyrosyl-tRNA synthetase 2 OS=Vibrio vulnificus GN=tyrS2 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.478e-14 Identity = 52/168 (30.95%), Postives = 80/168 (47.62%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASSNE-KTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG+ E I + L +A E + L++ G DPTA +HLG+ + + L F GH LIG T VGDP+GK+ RP L + + +N + I + I N +W + ++ + M+ ++ KKR Q ++ EF Y LLQGYD Sbjct: 12 KRGVEELIPEEEL--IAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRAFQDLGHDVTFLIGDFTGMVGDPTGKNSTRPPLTREDVLRNAETYKQQVFKILDPAKTKIQFNSEWLSELGAEGMIRLAAN-QTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQGYD 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_PHOPR (Tyrosyl-tRNA synthetase OS=Photobacterium profundum GN=tyrS PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.236e-14 Identity = 50/167 (29.94%), Postives = 77/167 (46.11%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG+ E I + L + N + L++ G DPTA +HLG+ + + L F GH LIG T VGDP+GK+ RP L + + N + I + I N W + ++ + M+ ++ KKR + ++ EF Y LLQGYD Sbjct: 12 KRGIDELIPEEELIAKLKEN-RPLRIKLGADPTAPDIHLGHTVILNKLRTFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLANAETYKEQVFKILDPAKTKIEFNSTWLSELGAEGMIRLASN-QTVARMLERDDFKKRYNGGRPIAIHEFMYPLLQGYD 176 The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bpback to top |