CX291662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BORPE (Tyrosyl-tRNA synthetase OS=Bordetella pertussis GN=tyrS PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.236e-14 Identity = 51/172 (29.65%), Postives = 81/172 (47.09%), Query Frame = 3 Query: 252 LERRGLLESIT-SDNLRSLASSNEK--TLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 + RRG E + S+ R LA S L++ G DPTA +HLG+ + + + GH + LIG T+ +GDPSG++ RP L + +E N S + + I N +W ++ R+ + M+ +E +R + ++ EF Y LLQGYD Sbjct: 18 IARRGCDELLVESEFARKLARSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHNVIFLIGDFTSTIGDPSGRNSTRPPLTREQIETNAKTYYAQASLVLDPARTEIRYNSEWCDPLGARGMIQLASRYT-VARMMEREDFTRRFKGGVPIAVHEFLYPLLQGYD 188
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BORPA (Tyrosyl-tRNA synthetase OS=Bordetella parapertussis GN=tyrS PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.236e-14 Identity = 51/172 (29.65%), Postives = 81/172 (47.09%), Query Frame = 3 Query: 252 LERRGLLESIT-SDNLRSLASSNEK--TLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 + RRG E + S+ R LA S L++ G DPTA +HLG+ + + + GH + LIG T+ +GDPSG++ RP L + +E N S + + I N +W ++ R+ + M+ +E +R + ++ EF Y LLQGYD Sbjct: 18 IARRGCDELLVESEFARKLARSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHNVIFLIGDFTSTIGDPSGRNSTRPPLTREQIETNAKTYYAQASLVLDPARTEIRYNSEWCDPLGARGMIQLASRYT-VARMMEREDFTRRFKGGVPIAVHEFLYPLLQGYD 188
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BORBR (Tyrosyl-tRNA synthetase OS=Bordetella bronchiseptica GN=tyrS PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.236e-14 Identity = 51/172 (29.65%), Postives = 81/172 (47.09%), Query Frame = 3 Query: 252 LERRGLLESIT-SDNLRSLASSNEK--TLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 + RRG E + S+ R LA S L++ G DPTA +HLG+ + + + GH + LIG T+ +GDPSG++ RP L + +E N S + + I N +W ++ R+ + M+ +E +R + ++ EF Y LLQGYD Sbjct: 18 IARRGCDELLVESEFARKLACSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHNVIFLIGDFTSTIGDPSGRNSTRPPLTREQIETNAKTYYAQASLVLDPARTEIRYNSEWCDPLGARGMIQLASRYT-VARMMEREDFTRRFKGGVPIAVHEFLYPLLQGYD 188
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BORA1 (Tyrosyl-tRNA synthetase OS=Bordetella avium (strain 197N) GN=tyrS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.519e-14 Identity = 50/172 (29.07%), Postives = 82/172 (47.67%), Query Frame = 3 Query: 252 LERRGLLESIT-SDNLRSLASSNEK--TLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 + RRG E + S+ R LA S L++ G DPTA +HLG+ + + + GH + LIG T+ +GDPSG++ RP L + +E N S + + I N +W ++ R+ + M+ +E +R ++ ++ EF Y L+QGYD Sbjct: 18 IARRGCDELLVESEFARKLARSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSTIGDPSGRNSTRPPLTREQIEHNAKTYYAQASLVLDPARTEIRYNSEWCDPLGARGMIQLASRYT-VARMMEREDFTRRFKTGVPIAVHEFLYPLMQGYD 188
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BURS3 (Tyrosyl-tRNA synthetase OS=Burkholderia sp. (strain 383) GN=tyrS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.415e-14 Identity = 45/170 (26.47%), Postives = 79/170 (46.47%), Query Frame = 3 Query: 258 RRGLLESITSDNLRSLASSNEKT---LKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +RG+ E + + + + T L++ G DPTA +H+G+ + + + GH + LIG T+ +GDPSG++ RP L + +E N + + + I N +W +K R+ + ++ +E KR + +S EF Y L+QGYD Sbjct: 25 KRGVDELLVEEEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRDKTEIRYNSEWSMPLGADGMIKLASRYT-VARILEREDFTKRFQGGVPISIHEFLYPLMQGYD 193
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_SYNSC (Tyrosyl-tRNA synthetase OS=Synechococcus sp. (strain CC9605) GN=tyrS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.097e-13 Identity = 52/161 (32.30%), Postives = 76/161 (47.20%), Query Frame = 3 Query: 306 ASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNI------LGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 A + L+V G DPT ++HLG+ + L F GH AV +IG TAR+GDP+GKS R +L + + N LG + T + + N +W + + +G +G M+AK+ KR S ++ EF Y LLQGYD Sbjct: 39 AEKEGRPLRVKLGIDPTGSNIHLGHSILFRKLRAFQDGGHTAVLIIGDFTARIGDPTGKSATRVQLSKEQVAANASTYLRQLGQDQPKETALLDFETPGRLEVRYNSEWLEGMDLPAVIGLLGT-GTVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYD 198
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_SYNS9 (Tyrosyl-tRNA synthetase OS=Synechococcus sp. (strain CC9902) GN=tyrS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.097e-13 Identity = 52/161 (32.30%), Postives = 76/161 (47.20%), Query Frame = 3 Query: 306 ASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNI------LGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 A + + L+V G DPT ++HLG+ + L F GH AV +IG TAR+GDP+GKS R +L + + N LG + T + + N +W + + +G +G M+AKE R S ++ EF Y LLQGYD Sbjct: 39 AEAEGRPLRVKLGIDPTGSNIHLGHSILFRKLRAFQDAGHIAVLIIGDFTARIGDPTGKSATRVQLSKNDVAVNASTYLRQLGQDQPKETALLDFETPGRLEVRYNSEWLEGMDLPAVIGLLGT-GTVGQMLAKEDFSNRYNSGTPIALHEFLYPLLQGYD 198
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_THIFE (Tyrosyl-tRNA synthetase OS=Thiobacillus ferrooxidans GN=tyrS PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13 Identity = 45/151 (29.80%), Postives = 71/151 (47.02%), Query Frame = 3 Query: 306 ASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 A + + L++ G DPTA LHLG + + F GH+ + +IG TA +GDP+GKS+ R L + + N I ++ N +W + L Q+ + M+ ++ KR + Q ++ EF Y LLQGYD Sbjct: 32 AQRDNRPLRIKLGMDPTAPDLHLGAYVLLHKARQFQDLGHRLLFVIGDFTAMIGDPTGKSVTRKALSREEVVANAATYRPQVFKILDPERTEVMFNSEWLGALR-PEELIQIAACYTVARMLERDDFNKRYSANQPIAIHEFLYPLLQGYD 181
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_HELPY (Tyrosyl-tRNA synthetase OS=Helicobacter pylori GN=tyrS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13 Identity = 47/155 (30.32%), Postives = 77/155 (49.68%), Query Frame = 3 Query: 294 LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 +R +NE+ + V GFDPTA LHLG+ + I L+ + G + LIG TA +GDP+GK+ R L+ + + +N + I + + N W ++ +F+ + M+ ++ KR + + +S EF Y LLQGYD Sbjct: 29 VRKYYETNERFI-VKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILDEKHTEVCFNSTWLDALGAKGMIELCAKFS-VARMLERDDFTKRYKENRPISIVEFLYPLLQGYD 181
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_SYNPX (Tyrosyl-tRNA synthetase OS=Synechococcus sp. (strain WH8102) GN=tyrS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.578e-13 Identity = 51/161 (31.68%), Postives = 75/161 (46.58%), Query Frame = 3 Query: 306 ASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNI------LGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYD 758 A + L+V G DPT ++HLG+ + L F GH AV +IG TAR+GDP+GK R +L + + N LG + T + + N +W + + +G +G M+AK+ KR S ++ EF Y LLQGYD Sbjct: 39 AEKEGRPLRVKLGIDPTGSNIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKCATRVQLSKEDVAANASTYLRQLGQDQPKETALLDFETPGRLEVRYNSEWLEGMDLPAVIGLLGT-GTVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYD 198 The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bpback to top |