CX291662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_LISMH (Tyrosyl-tRNA synthetase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=tyrS PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.802e-34 Identity = 75/179 (41.90%), Postives = 110/179 (61.45%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 N++D LE RG + T + LR +EK + +YCG DP+ +S+H+G+L+ ++L F GH+ + L+GGAT +GDPSGK ER ++ + KN+ + IF G S ++NNYDW KD S LDFL+ G+ + TM++K+ V RL E G+SFTEF+YQ+LQ DF Sbjct: 2 NIIDELEWRGAIYQQTDEEGLRKWV--DEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFEGDSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDF 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_LISMF (Tyrosyl-tRNA synthetase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=tyrS PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.802e-34 Identity = 75/179 (41.90%), Postives = 110/179 (61.45%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 N++D LE RG + T + LR EK + +YCG DP+ +S+H+G+L+ ++L F GH+ + L+GGAT +GDPSGK ER ++ + KN+ + IF G+S ++NNYDW KD S LDFL+ G+ + TM++K+ V RL E G+SFTEF+YQ+LQ DF Sbjct: 2 NIIDELEWRGAIYQQTDEEGLRKWVE--EKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFEGNSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDF 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_LISMC (Tyrosyl-tRNA synthetase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=tyrS PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.802e-34 Identity = 75/179 (41.90%), Postives = 110/179 (61.45%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 N++D LE RG + T + LR EK + +YCG DP+ +S+H+G+L+ ++L F GH+ + L+GGAT +GDPSGK ER ++ + KN+ + IF G+S ++NNYDW KD S LDFL+ G+ + TM++K+ V RL E G+SFTEF+YQ+LQ DF Sbjct: 2 NIIDELEWRGAIYQQTDEEGLRKWVE--EKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFEGNSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDF 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_BIFA0 (Tyrosyl-tRNA synthetase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=tyrS PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.802e-34 Identity = 83/182 (45.60%), Postives = 116/182 (63.74%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDP--SGKSIERPELDI-----DTLEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 +V+D LE RGL+ T D R + N + + YCGFDPTA SLH+GNL+ +I++ GH +AL+GGAT +GDP SG+ I P+ DI + L I GI + GS+ V ++NYDW + LDFL+ +G+ R+GTMI+K+ V +RL SE+G+SFTEFSYQ+LQG D+ Sbjct: 14 SVLDELEWRGLISQST-DRDRLAHTLNGEPVHYYCGFDPTAPSLHIGNLVQLIIMRHLQEAGHHPIALVGGATGLIGDPRQSGERILNPK-DIVEQWCERLRIQIGGILEQE----GSNPVTFVSNYDWTATMNVLDFLRDIGKNFRVGTMISKDIVARRLNSEEGISFTEFSYQVLQGNDY 189
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_LISIN (Tyrosyl-tRNA synthetase OS=Listeria innocua GN=tyrS PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.271e-34 Identity = 75/179 (41.90%), Postives = 109/179 (60.89%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDN-LRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF---GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 N++D LE RG + T + LR EK + +YCG DP+ +S+H+G+L+ ++L F GH+ + L+GGAT +GDPSGK ER ++ + KN+ + IF G S ++NNYDW KD S LDFL+ G+ + TM++K+ V RL E G+SFTEF+YQ+LQ DF Sbjct: 2 NIIDELEWRGAIYQQTDEEGLRKWVE--EKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFEGDSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDF 176
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_ERWT9 (Tyrosyl-tRNA synthetase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=tyrS PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.271e-34 Identity = 77/180 (42.78%), Postives = 114/180 (63.33%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDT----LEKNILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRL-ESEQGLSFTEFSYQLLQGYDF 761 N++ L+ RGL+ +T +N + + + + +YCGFDPTA+SLHLG+L+ ++ L F GH+ VAL+GGAT +GDPS K+ ER +T +EK ++ S G ++ + NNYDW+ + L FL+ +G+ + MI KE+VK+RL +QG+SFTEFSY LLQGYDF Sbjct: 5 NLIKQLQERGLVAQVTDENALAERLA-QGPIALYCGFDPTADSLHLGHLVPLLCLKRFQDAGHKPVALVGGATGLIGDPSFKAAERKLNTSETVNQWVEKIRQQVAPFLSFNCGDNSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_ERWCT (Tyrosyl-tRNA synthetase OS=Erwinia carotovora subsp. atroseptica GN=tyrS PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.271e-34 Identity = 75/180 (41.67%), Postives = 115/180 (63.89%), Query Frame = 3 Query: 237 NVVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIF----GSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQ-GLSFTEFSYQLLQGYDF 761 N++ L+ RGL+ +T + + + + + +YCGFDPTA+SLHLG+L+ ++ L F GH+ VAL+GGAT +GDPS K+ ER +T+ + + I + S G ++ + NNYDW+ + + LDFL+ +G+ + MI+KE+VK+RL + G+SFTEFSY LLQGYDF Sbjct: 5 NLIKQLQERGLIAQVTDEEALAERLA-QGPIALYCGFDPTADSLHLGHLVPLLCLKRFQLSGHKPVALVGGATGLIGDPSFKATERKLNTSETVGEWVEKIRRQVSPFLDFDCGKNSAIAANNYDWFGNMNVLDFLRDIGKHFSVNQMISKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_CHLMU (Tyrosyl-tRNA synthetase OS=Chlamydia muridarum GN=tyrS PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.271e-34 Identity = 77/176 (43.75%), Postives = 115/176 (65.34%), Query Frame = 3 Query: 240 VVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGS--SNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 ++D L++RG+L++ +S L SL + + Y GFDPTA SLH+G+ +GI L G +AL+GGAT +GDPSGKS+ER LD ++ +L SK + ++ I+NN DW S +DFL+ +G++ R+G+M+AK+ VK+R+ SE+G+S+TEFSY LLQ YDF Sbjct: 4 LIDSLQKRGILDN-SSAGLESLTAP----VSAYLGFDPTAPSLHIGHWIGICFLRRLSAYGITPIALVGGATGMIGDPSGKSVERSLLD----QEQVLDNSKKIEVALANYLPDIRIVNNADWLGSLSMVDFLRDIGKYFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDF 170
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYYM_DROME (Probable tyrosyl-tRNA synthetase, mitochondrial OS=Drosophila melanogaster GN=CG16912 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.271e-34 Identity = 72/193 (37.31%), Postives = 118/193 (61.14%), Query Frame = 3 Query: 237 NVVDILER---RGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEKNILGISKTFSTIFGS---------------SNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESEQGLSFTEFSYQLLQGYDF 761 N++++ +R G+ + ++ L + +++ +Y GFDPTA+SLH+GNLL I+ L R GH+ +AL+GGAT +GDPSG+ ER +L +E N+ I + +F + + ++I+NN DW+ D +DF+ +GR R+G+M+++ SV+ RLESE G+SFTEF+YQ+ Q YD+ Sbjct: 27 NLLELTDRGFFHGIFPDTAAPRMKQLFTRGQQS--IYAGFDPTADSLHVGNLLVIMGLIHCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENHENCLWDSKKQKLPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMSFTEFTYQIFQAYDW 217
BLAST of CX291662 vs. ExPASy Swiss-Prot
Match: SYY_DECAR (Tyrosyl-tRNA synthetase OS=Dechloromonas aromatica (strain RCB) GN=tyrS PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.191e-34 Identity = 76/178 (42.70%), Postives = 112/178 (62.92%), Query Frame = 3 Query: 240 VVDILERRGLLESITSDNLRSLASSNEKTLKVYCGFDPTAESLHLGNLLGIIVLSWFLRCGHQAVALIGGATARVGDPSGKSIERPELDIDTLEK---NILGISKTFSTIFGSSNVVILNNYDWWKDFSFLDFLKQVGRFARIGTMIAKESVKKRLESE-QGLSFTEFSYQLLQGYDF 761 ++ L RGL+ IT D E+++ +YCGFDPTA+SLHLG+L+ +++L F GH+ +AL+GGAT +GDPS K+ ER D + I G + F G++ ++ NNYDW+ + L+F++ +G+ + MI KESV++RL E QG+S+TEFSY LLQGYDF Sbjct: 6 LIQDLHDRGLIAQIT-DAAALDKLLTEESVTLYCGFDPTADSLHLGHLVPVLILKRFQEAGHKPIALVGGATGMIGDPSFKATERKLNTPDVIASWVGKIRGQVEPFLKFDGANAAIMANNYDWFGGMNCLEFMRDIGKHFSVNAMIKKESVQQRLTREDQGISYTEFSYSLLQGYDF 182 The following BLAST results are available for this feature:
BLAST of CX291662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291662 ID=CX291662; Name=CX291662; organism=Citrus clementina; type=EST; length=762bpback to top |