CX291726

Overview
NameCX291726
Unique NameCX291726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN1_ARATH (Mannan endo-1,4-beta-mannosidase 1 OS=Arabidopsis thaliana GN=MAN1 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 1.698e-75
Identity = 133/206 (64.56%), Postives = 164/206 (79.61%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPNNTPV-GTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKSYKY 616
            +I+SLVNNF++YGGR +YVEWA      L   D+FYTN+ VKQ+YKNHVK VLTR N+ITG  YKDDPTIF+WEL+NE RC    +  +LQ+W+KEMA++VKSID++HLLE+GLEGFYGES+PER  YNP    + GTDFITNNQIPD+DFATIHIYP+ WLP  ++    Q  FV+RWI AHI+D D+I+KKP+LI EFGKS KY
Sbjct:  126 LIISLVNNFEDYGGRKKYVEWA-----GLDEPDEFYTNSAVKQFYKNHVKTVLTRKNTITGRMYKDDPTIFSWELINEPRCNDSTASNILQDWVKEMASYVKSIDSNHLLEIGLEGFYGESIPERTVYNPGGRVLTGTDFITNNQIPDIDFATIHIYPDSWLPLQSSRTGEQDTFVDRWIGAHIEDCDNIIKKPLLITEFGKSSKY 326          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN1_ORYSJ (Mannan endo-1,4-beta-mannosidase 1 OS=Oryza sativa subsp. japonica GN=MAN1 PE=2 SV=2)

HSP 1 Score: 273.863 bits (699), Expect = 4.624e-73
Identity = 127/205 (61.95%), Postives = 159/205 (77.56%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPER-QKYNPNNTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKSYK 613
            VILSLV+N+  +GGR +YV WAR +GQ + ++D+F+TN VVK +YKNHVK VLTR N+ITGVAY+DDPTI AWELMNE RC +D SG  +Q WI EMAAHVKSID +H+LEVGLEGFYG S P R    NP+   +GTDFI NNQ+P +DFAT+H YP+QWL      D+ QL F+ RW+ AHI D+ ++L+KP+LI EFGKS+K
Sbjct:  133 VILSLVDNYDSFGGRKQYVNWARAQGQGIGSDDEFFTNPVVKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSDLSGRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSGYQLGTDFIANNQVPGIDFATVHSYPDQWL--SGKDDQAQLGFMGRWLDAHIADAQAVLRKPLLIAEFGKSWK 335          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN7_ARATH (Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis thaliana GN=MAN7 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.295e-72
Identity = 119/204 (58.33%), Postives = 160/204 (78.43%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPNNTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKSYK 613
            +ILS  NN++ +GGR +YV+WAR RG+ + +EDDF+T+++VK +YKNH+KAVL R N+ T V YKDDPTI AWELMNE RCP+DPSG  +Q WI EMAAHVKS+D +HLLE GLEGFYG+S P+ +  NP     GTDFI NN+IP +DF T+H YP++W P  ++S++ Q+ F+N+W+ AHIQD+ ++L KPI++ EFGKS K
Sbjct:  126 IILSFANNYESFGGRKQYVDWARSRGRPVSSEDDFFTDSLVKDFYKNHIKAVLNRFNTFTKVHYKDDPTIMAWELMNEPRCPSDPSGRAIQAWITEMAAHVKSLDRNHLLEAGLEGFYGQSSPQSKTLNPPG-QFGTDFIANNRIPGIDFVTVHSYPDEWFP--DSSEQSQMDFLNKWLDAHIQDAQNVLHKPIILAEFGKSMK 326          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN4_SOLLC (Mannan endo-1,4-beta-mannosidase 4 OS=Solanum lycopersicum GN=MAN4 PE=1 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 6.468e-67
Identity = 119/204 (58.33%), Postives = 158/204 (77.45%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPNNTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKSYK 613
            +I+SLVNN+  +GG+ +YVEWA +RGQ L ++DDF+TN +VK +YKN+VK VLTR+N+IT VAYKDDPTI +WEL+NE RCP+D SG   Q W+ EMA ++KSID++HLLE+GLEGFYG    + ++YNPN+   GT+FI+NNQ+  +DF TIH+YP QWLP    + E Q  + ++WIQ HI DS  +LKKP+LI EFGKS K
Sbjct:  127 LIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGN---DMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWLP--GLTQEAQDKWASQWIQVHIDDS-KMLKKPLLIAEFGKSTK 324          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN5_SOLLC (Mannan endo-1,4-beta-mannosidase 5 OS=Solanum lycopersicum GN=MAN5 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.441e-66
Identity = 114/202 (56.44%), Postives = 152/202 (75.25%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPNNTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKS 607
            +ILS VNN+ ++GG+ +YV+WAR  G  +  +DDFYTN + K YYKNH+K V+TR N+ITG+ YKDD TI AWELMNE R   D SG  L  W++EMA+ VKS+DN HLLE+G+EGFYG+SVPER+  NP    VGTDFI+N+ I ++DFATIH Y +QWL     SD+ Q+ F+ +W+ +H QD+ +ILKKP+++ EFGKS
Sbjct:  134 LILSFVNNYNDFGGKAQYVQWARNAGAQINGDDDFYTNYITKNYYKNHIKKVVTRFNTITGMTYKDDSTIMAWELMNEPRNQADYSGNTLNAWVQEMASFVKSLDNKHLLEIGMEGFYGDSVPERKSINP-GYQVGTDFISNHLIKEIDFATIHAYTDQWL--SGQSDDAQMIFMQKWMTSHWQDAKNILKKPLVLAEFGKS 332          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN2_SOLLC (Mannan endo-1,4-beta-mannosidase 2 OS=Solanum lycopersicum GN=MAN2 PE=2 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 1.441e-66
Identity = 114/202 (56.44%), Postives = 152/202 (75.25%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPNNTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKS 607
            +ILS VNN+ ++GG+ +YV+WAR  G  +  +DDFYTN + K YYKNH+K V+TR N+ITG+ YKDD TI AWELMNE R   D SG  L  W++EMA+ VKS+DN HLLE+G+EGFYG+SVPER+  NP    VGTDFI+N+ I ++DFATIH Y +QWL     SD+ Q+ F+ +W+ +H QD+ +ILKKP+++ EFGKS
Sbjct:  134 LILSFVNNYNDFGGKAQYVQWARNAGAQINGDDDFYTNYITKNYYKNHIKKVVTRFNTITGMTYKDDSTIMAWELMNEPRNQADYSGNTLNAWVQEMASFVKSLDNKHLLEIGMEGFYGDSVPERKSINP-GYQVGTDFISNHLIKEIDFATIHAYTDQWL--SGQSDDAQMIFMQKWMTSHWQDAKNILKKPLVLAEFGKS 332          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN9_ORYSJ (Putative mannan endo-1,4-beta-mannosidase 9 OS=Oryza sativa subsp. japonica GN=MAN9 PE=2 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 1.220e-65
Identity = 120/202 (59.41%), Postives = 161/202 (79.70%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPNNTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKS 607
            +ILSLVNN+  +GG+ +YV+WAR++G +L ++DDF+ + V KQ+YKNH  AVLTR+N ITGVAYKDDPTIFAWEL+NE RC +D SG  LQ W+ EMA +VKS+D +H++E+GLEGFYGES+   + +NP  T VGTDFI NN +P VDFATIH YP+QW+  G +SDE Q+AF+ +W+  HI+DS ++L+KP+L+ EFG S
Sbjct:  134 LILSLVNNWDGFGGKKQYVQWARDQGHNLGSDDDFFRSDVTKQFYKNH--AVLTRVNKITGVAYKDDPTIFAWELINEPRCQSDLSGKTLQAWVTEMAGYVKSVDPNHMVEIGLEGFYGESM--HKNFNPGYT-VGTDFIANNLVPAVDFATIHSYPDQWV-SGASSDE-QVAFMRKWMADHIRDSAAVLRKPLLVTEFGWS 328          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN6_ARATH (Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis thaliana GN=MAN6 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.491e-63
Identity = 106/204 (51.96%), Postives = 150/204 (73.53%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPN--NTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKS 607
            +ILSLVNN+  YGG+ +YV+W    G +L ++DDF+TN  ++ +Y++HV+ VL R+N+ T + YK+DPTIFAWELMNE RCP+DPSG  LQ WI+EMA  VKS+D  HL+E+GLEGFYG S P R ++NPN     VGTDFI NNQ+  +DFA++H+YP+ W+ P  ++  ++  F + W+QAH++D++  L  P+L  EFG S
Sbjct:  142 LILSLVNNWDAYGGKAQYVKWGNASGLNLTSDDDFFTNPTLRNFYQSHVRTVLNRVNTFTNITYKNDPTIFAWELMNEPRCPSDPSGDKLQSWIQEMAVFVKSLDAKHLVEIGLEGFYGPSAPARTRFNPNPYAAQVGTDFIRNNQVLGIDFASVHVYPDSWISPAVSNSFLE--FTSSWMQAHVEDAEMYLGMPVLFTEFGVS 343          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN1_SOLLC (Mannan endo-1,4-beta-mannosidase 1 OS=Solanum lycopersicum GN=MAN1 PE=1 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 1.947e-63
Identity = 111/202 (54.95%), Postives = 154/202 (76.24%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPNNTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKS 607
            +ILS VN + ++GG+ +YV WAR  G  + N+D+FYT+ ++K+Y KNH++ V+TR+NSIT VAYKDDPTI AWELMNE R   D SG  +  W++EMA+ VKS+DN HLLEVG+EGFYG+S+PER+  NP    VGTDFI+N+ I ++DFATIH Y +QW+     SD+ QL ++ +WI +H +D+ +ILKKP+++ EFGKS
Sbjct:  122 LILSFVNQWNDFGGKAQYVWWARNAGAQISNDDEFYTHPMLKKYLKNHIEKVVTRLNSITKVAYKDDPTIMAWELMNEPRDQADYSGKTVNGWVQEMASFVKSLDNKHLLEVGMEGFYGDSIPERKSVNP-GYQVGTDFISNHLINEIDFATIHAYTDQWV--SGQSDDAQLVWMEKWITSHWEDARNILKKPLVLAEFGKS 320          
BLAST of CX291726 vs. ExPASy Swiss-Prot
Match: MAN8_ORYSJ (Mannan endo-1,4-beta-mannosidase 8 OS=Oryza sativa subsp. japonica GN=MAN8 PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 7.400e-63
Identity = 112/206 (54.37%), Postives = 152/206 (73.79%), Query Frame = 2
Query:    2 VILSLVNNFKEYGGRPRYVEWARERGQSLKNEDDFYTNAVVKQYYKNHVKAVLTRINSITGVAYKDDPTIFAWELMNEARCPTDPSGTLLQEWIKEMAAHVKSIDNHHLLEVGLEGFYGESVPERQKYNPN--NTPVGTDFITNNQIPDVDFATIHIYPEQWLPPGNTSDEIQLAFVNRWIQAHIQDSDSILKKPILIGEFGKSYK 613
            +ILSL NN+++YGG+ +YV W +E G  L +EDDF+++  +K YYK  V+AV+TRIN++T   YKDDPTI AWEL+NE RCP+DPSG  LQ WI+EMA++VKSID  HLLE+G+EGFYG S PE    NP+  +   GTDFI N+Q P +D A+IH+Y + WLP  ++  E  L FV++W+Q HI D+ ++L  PI++GEFG S K
Sbjct:   96 LILSLCNNWEDYGGKAQYVRWGKEAGLDLTSEDDFFSDPTIKSYYKAFVEAVVTRINTVTNETYKDDPTILAWELINEPRCPSDPSGDTLQAWIEEMASYVKSIDPVHLLEIGIEGFYGLSTPELLPVNPDEYSGHAGTDFIRNHQAPGIDLASIHVYSDTWLP--HSIKENHLQFVDKWMQQHIHDAANLLGMPIVVGEFGVSVK 299          
The following BLAST results are available for this feature:
BLAST of CX291726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
MAN1_ARATH1.698e-7564.56Mannan endo-1,4-beta-mannosidase 1 OS=Arabidopsis ... [more]
MAN1_ORYSJ4.624e-7361.95Mannan endo-1,4-beta-mannosidase 1 OS=Oryza sativa... [more]
MAN7_ARATH2.295e-7258.33Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis ... [more]
MAN4_SOLLC6.468e-6758.33Mannan endo-1,4-beta-mannosidase 4 OS=Solanum lyco... [more]
MAN5_SOLLC1.441e-6656.44Mannan endo-1,4-beta-mannosidase 5 OS=Solanum lyco... [more]
MAN2_SOLLC1.441e-6656.44Mannan endo-1,4-beta-mannosidase 2 OS=Solanum lyco... [more]
MAN9_ORYSJ1.220e-6559.41Putative mannan endo-1,4-beta-mannosidase 9 OS=Ory... [more]
MAN6_ARATH1.491e-6351.96Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis ... [more]
MAN1_SOLLC1.947e-6354.95Mannan endo-1,4-beta-mannosidase 1 OS=Solanum lyco... [more]
MAN8_ORYSJ7.400e-6354.37Mannan endo-1,4-beta-mannosidase 8 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC04002G09SK FlavFr1 Citrus clementina cDNA clone C04002G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291726 ID=CX291726; Name=CX291726; organism=Citrus clementina; type=EST; length=617bp
TGTGATCCTAAGCTTAGTGAATAACTTCAAGGAGTATGGGGGAAGGCCAC
GTTATGTTGAATGGGCGAGAGAGCGTGGCCAGTCTTTGAAGAATGAGGAT
GACTTCTATACAAATGCTGTTGTCAAACAATACTACAAGAATCATGTTAA
GGCAGTGCTGACGAGAATCAACTCGATAACCGGCGTGGCATACAAGGATG
ATCCCACCATTTTTGCATGGGAACTCATGAACGAAGCTCGCTGCCCAACC
GATCCCTCTGGGACACTACTTCAGGAGTGGATTAAAGAAATGGCAGCGCA
TGTTAAGTCCATCGATAACCATCATCTGCTTGAAGTAGGTTTGGAAGGTT
TCTATGGGGAATCAGTACCAGAAAGGCAAAAATACAATCCCAACAACACT
CCTGTTGGTACTGATTTCATTACCAATAATCAGATCCCAGATGTTGATTT
CGCAACCATTCATATTTACCCCGAGCAATGGTTGCCACCAGGAAACACAA
GTGACGAAATTCAACTTGCATTTGTGAATAGATGGATCCAGGCTCATATC
CAGGACTCAGATTCAATTCTGAAGAAACCAATCCTCATTGGGGAGTTTGG
AAAGTCATATAAATATC
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