CX292078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292078 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.591e-23 Identity = 52/112 (46.43%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 16 RTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIHAEVKDGVLYITIPKASSTAKIVDINVQ 351 R PW I++ E++ ++R D+PG+++ DVKV VE+ MLVIK E D S W S Y SY TR+ LPDN E +K+ AE+K+GVLYITIPK K++D+ VQ Sbjct: 77 RAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDS-------WSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERKVIDVQVQ 181
BLAST of CX292078 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 5.772e-23 Identity = 53/116 (45.69%), Postives = 74/116 (63.79%), Query Frame = 1 Query: 1 GTRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIHAEVKDGVLYITIPKASSTAKIVDINV 348 GT RTPW I + EN+ K+R D+PG+S+ DVKV VE MLVIK E + + ++ W N Y SY TR++LPDNV +KI AE+K+GVL+I+IPK K++D+ + Sbjct: 127 GTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDG-------RDKHSWGRN-YSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPKTEVEKKVIDVQI 234
BLAST of CX292078 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 9.845e-23 Identity = 49/117 (41.88%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 1 GTRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIHAEVKDGVLYITIPKASSTAKIVDINVQ 351 G R PW I+E E++ K+R D+PG+S+ DVK+ VE+++LVIK E+ + + ++ W SY TR+ LPDN E +KI AE+K+GVL+ITIPK K++D+ +Q Sbjct: 121 GVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKE----------DSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227
BLAST of CX292078 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.286e-22 Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 16 RTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIHAEVKDGVLYITIPKASSTAKIVDINVQ 351 R PW I++ E++ ++R D+PG+S+ DVKV VE+ +LVIK++ + N E+ W Y Y TR+ LPDN E EK+ AE+KDGVLYITIPK ++D+ +Q Sbjct: 130 RVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGG---------EDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTKIERTVIDVQIQ 232
BLAST of CX292078 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.422e-21 Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 1 GTRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIHAEVKDGVLYITIPKASSTAKIVDINVQ 351 GT R PW I++ EN+ K+R D+PG+S+ +VKV VE+ +LVIK E ++ E+ D S W N Y SY TR++LPDNV+ +K+ AE+K+GVL I+IPK K+ D+ ++ Sbjct: 134 GTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEH-KKEESGKDDS-------WGRN-YSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPKTKVEKKVTDVEIK 241
BLAST of CX292078 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.604e-19 Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 16 RTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIHAEVKDGVLYITIPKASSTAKIVDINVQ 351 R PW + E + + ++R D+PG+SR +VKV VE+ LVI+ E + +GS + W SY R+ALPD + K+ AE+K+GVL +T+PK K++D+ VQ Sbjct: 132 RMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSG---DGWWKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPKTEVERKVIDVQVQ 240
BLAST of CX292078 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.126e-18 Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 1 Query: 10 RGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAE-KAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIHAEVKDGVLYITIPKASSTAKIVDINVQ 351 R R PW I E E + K+R D+PG+SR +V+V VE+ LVI+ E K + E +G + W SY R+ALPD + ++ AE+K+GVL +++PK + K++D+ VQ Sbjct: 128 RRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEGQGEGG----DGWWKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPKRETERKVIDVQVQ 238
BLAST of CX292078 vs. ExPASy Swiss-Prot
Match: HS26M_ARATH (26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP26.5 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.068e-16 Identity = 40/108 (37.04%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 31 IRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIHAEVKDGVLYITIPKASSTAK-IVDINVQ 351 ++E ++ YK+R +VPG+++ DVK+ V + +L IK + ++A + + EE+E W S YG Y+T ++LPD+ + E I AE+K+GVL + IP+ K + +I+V+ Sbjct: 129 VKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGD----HKAEEEKGSPEEDEYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQEISVE 232
BLAST of CX292078 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.987e-12 Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 1 GTRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNV-EFEKIHAEVKDGVLYITIPK 312 G RRG W I+E ++ +R+D+PG+SR DVK+ +E+ LVI+ E G E+ E +G +++RI LPD + + ++I AE+K+GVL + IPK Sbjct: 104 GARRG---WDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGE----------GKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPK 195
BLAST of CX292078 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.819e-12 Identity = 45/119 (37.82%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 4 TRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNV-EFEKIHAEVKDGVLYITIPKASSTAKIVDINVQ*D 357 +RRG W RETE+ +RLD+PG+ + DVK+ VE++ L IK E+ +E EE +G +S+RI LP+ + + + I AE+K+GVL +T+PK + INV+ D Sbjct: 99 SRRG---WDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEG-----------AKESEEKEKSG-RRFSSRIDLPEKLYKIDVIKAEMKNGVLKVTVPKMKEEERNNVINVKVD 202 The following BLAST results are available for this feature:
BLAST of CX292078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292078 ID=CX292078; Name=CX292078; organism=Citrus clementina; type=EST; length=486bpback to top |