CX293825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293825 vs. ExPASy Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.120e-40 Identity = 82/101 (81.19%), Postives = 87/101 (86.14%), Query Frame = 3 Query: 144 MSDFDIQVXXXXXXXXXXKAEDSXAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 446 MSD ++QV AEDS AG+KEYVHIRVQQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG Sbjct: 1 MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAG 101
BLAST of CX293825 vs. ExPASy Swiss-Prot
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.186e-39 Identity = 79/101 (78.22%), Postives = 87/101 (86.14%), Query Frame = 3 Query: 144 MSDFDIQVXXXXXXXXXXKAEDSXAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 446 MS+FD + AEDS AG+K+YVH+RVQQRNGRKSLTTVQGLKK++SYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS+FLVQAG Sbjct: 1 MSEFDNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAG 101
BLAST of CX293825 vs. ExPASy Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.548e-39 Identity = 82/101 (81.19%), Postives = 85/101 (84.16%), Query Frame = 3 Query: 144 MSDFDIQVXXXXXXXXXXKAEDSXAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 446 MS+ D QV AEDS AG+KEYVHIRVQQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAG 101
BLAST of CX293825 vs. ExPASy Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 1.548e-39 Identity = 82/101 (81.19%), Postives = 85/101 (84.16%), Query Frame = 3 Query: 144 MSDFDIQVXXXXXXXXXXKAEDSXAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 446 MS+ D QV AEDS AG+KEYVHIRVQQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAG 101
BLAST of CX293825 vs. ExPASy Swiss-Prot
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.022e-39 Identity = 82/103 (79.61%), Postives = 86/103 (83.50%), Query Frame = 3 Query: 144 MSDFDIQVXXXXXXXXXXKAEDSXA--GSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 446 MSD DIQ+ A DS A GSK+YVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAG Sbjct: 1 MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAG 103
BLAST of CX293825 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.022e-39 Identity = 82/103 (79.61%), Postives = 86/103 (83.50%), Query Frame = 3 Query: 144 MSDFDIQVXXXXXXXXXXKAEDSXA--GSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 446 MSD DIQ+ A DS A GSK+YVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAG Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAG 103
BLAST of CX293825 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.022e-39 Identity = 82/103 (79.61%), Postives = 86/103 (83.50%), Query Frame = 3 Query: 144 MSDFDIQVXXXXXXXXXXKAEDSXA--GSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 446 MSD DIQ+ A DS A GSK+YVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAG Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAG 103
BLAST of CX293825 vs. ExPASy Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 7.684e-39 Identity = 81/103 (78.64%), Postives = 86/103 (83.50%), Query Frame = 3 Query: 144 MSDFDIQVXXXXXXXXXXKAEDSXA--GSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 446 MSD DIQ+ A DS A GSK+YVH+R+QQRNGRKSLTTVQGLKKEFSY+KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAG Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAG 103
BLAST of CX293825 vs. ExPASy Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 5.699e-34 Identity = 71/101 (70.30%), Postives = 79/101 (78.22%), Query Frame = 3 Query: 144 MSDFDIQVXXXXXXXXXXKAEDSXAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 446 M D DIQ+ + D+ +KEYVHIR+QQRNGRKSLTTVQGLKKE SY+KILKDLKK CCNGTVV D ELG+VIQLQGDQRKNVSTF+VQAG Sbjct: 1 MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILKDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAG 101
BLAST of CX293825 vs. ExPASy Swiss-Prot
Match: EIF1_PONAB (Eukaryotic translation initiation factor 1 OS=Pongo abelii GN=EIF1 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.982e-24 Identity = 47/77 (61.04%), Postives = 64/77 (83.12%), Query Frame = 3 Query: 216 AGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 446 AG+++Y+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ PE G+VIQLQGDQRKN+ FLV+ G Sbjct: 25 AGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIG 101 The following BLAST results are available for this feature:
BLAST of CX293825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293825 ID=CX293825; Name=CX293825; organism=Citrus clementina; type=EST; length=447bpback to top |