CX294126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_ANASP (Asparaginyl-tRNA synthetase OS=Anabaena sp. (strain PCC 7120) GN=asnS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.454e-19 Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 13 GMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 G DP YP+ K + + EFLR R RTN+ AV R+RNA + A H F Q++GFL++HTPIIT SDCEGAGE+F VT+L Sbjct: 99 GEADPETYPLQKKRHSFEFLRTIGHLRSRTNSFGAVFRVRNACSAAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTSL 179
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_MICAN (Asparaginyl-tRNA synthetase OS=Microcystis aeruginosa (strain NIES-843) GN=asnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.899e-19 Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 25 PAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 P YP+ K + + EFLR R RTNT+ AV R+RNA A A H+F Q++GF+++HTPIIT +DCEGAGE+F VT+L Sbjct: 101 PPDYPLQKKRHSFEFLRTIAHLRARTNTLGAVMRVRNACATAIHSFFQEKGFIWVHTPIITANDCEGAGELFTVTSL 177
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_IDILO (Asparaginyl-tRNA synthetase OS=Idiomarina loihiensis GN=asnS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.899e-19 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN AV R+RNAL+ A H F ++G+L++ TPIITTSDCEGAGEMF+V+TL Sbjct: 105 DPDTYPMAPKRHSMEYLREYAHLRPRTNITGAVMRVRNALSQAIHRFFHEEGYLWVSTPIITTSDCEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SYNP2 (Asparaginyl-tRNA synthetase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=asnS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.480e-19 Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 13 GMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKE 285 G DP YP+ K + + EFLR R +TNT+ AV R+RNA A A H F Q++GF++ HTPIIT SDCEGAGEMF VT K KE Sbjct: 96 GEADPETYPLQKKRHSFEFLRTIGHLRGKTNTMGAVMRVRNACATAIHQFFQERGFIWAHTPIITASDCEGAGEMFAVTNFDLANPKRTKE 186
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHELP (Asparaginyl-tRNA synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=asnS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.480e-19 Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E LR+ RPRTN I AVAR+RN L++A H F ++GF+++ TP+IT SDCEGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSHAIHNFYNEEGFIWVSTPLITASDCEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_BACFR (Asparaginyl-tRNA synthetase OS=Bacteroides fragilis GN=asnS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.480e-19 Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1 Query: 34 YPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 YP+ K ++EFLR+ RPRTNT AV RIR+ +A A H F ++GF Y HTPIIT SDCEGAG+MFQVTT+ Sbjct: 107 YPLQKKGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMFQVTTM 180
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_BACFN (Asparaginyl-tRNA synthetase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=asnS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.480e-19 Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1 Query: 34 YPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 YP+ K ++EFLR+ RPRTNT AV RIR+ +A A H F ++GF Y HTPIIT SDCEGAG+MFQVTT+ Sbjct: 107 YPLQKKGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMFQVTTM 180
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHEDO (Asparaginyl-tRNA synthetase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=asnS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.239e-19 Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E LR+ RPRTN I AVAR+RN L+ A H F +QGF+++ TP+IT SDCEGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEQGFIWVSTPLITASDCEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHEAM (Asparaginyl-tRNA synthetase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=asnS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.239e-19 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E LRD RPRTN I AVAR+RN L+ A H F + GF+++ TPIIT SDCEGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEHLRDVAHLRPRTNIIGAVARVRNCLSQAIHRFYHENGFIWVSTPIITASDCEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_BORGA (Asparaginyl-tRNA synthetase OS=Borrelia garinii GN=asnS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.239e-19 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 10 VGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 +G D YP+ K + T EFLR+ R RTNT A+AR+RN ++Y H + QK GF YI+TPIIT++D EGAGEMF+V+TL Sbjct: 98 IGEADSKTYPLQKKRHTFEFLREIPHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTL 179 The following BLAST results are available for this feature:
BLAST of CX294126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294126 ID=CX294126; Name=CX294126; organism=Citrus clementina; type=EST; length=502bpback to top |