CX294126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_BACTN (Asparaginyl-tRNA synthetase OS=Bacteroides thetaiotaomicron GN=asnS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.230e-19 Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1 Query: 34 YPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 YP+ K ++EFLR+ RPRTNT AV RIR+ +A A H F ++GF Y HTPIIT SDCEGAG+MFQVTT+ Sbjct: 107 YPLQKKGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITGSDCEGAGQMFQVTTM 180
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_ALKOO (Asparaginyl-tRNA synthetase OS=Alkaliphilus oremlandii (strain OhILAs) GN=asnS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.230e-19 Identity = 43/74 (58.11%), Postives = 56/74 (75.68%), Query Frame = 1 Query: 34 YPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 YP+ K + T EFLR+ RPR+NT +AV R+R+ A+A H F Q++GF+Y HTPIIT SD EGAGEMF++TTL Sbjct: 106 YPLQKKRHTFEFLREIAHLRPRSNTFSAVFRVRSLAAFAIHQFFQERGFVYTHTPIITGSDAEGAGEMFRITTL 179
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHESW (Asparaginyl-tRNA synthetase OS=Shewanella sp. (strain W3-18-1) GN=asnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E LR+ RPRTN I AVAR+RN L+ A H F ++GF+++ TP+IT SDCEGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHEPC (Asparaginyl-tRNA synthetase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=asnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E LR+ RPRTN I AVAR+RN L+ A H F ++GF+++ TP+IT SDCEGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHEFN (Asparaginyl-tRNA synthetase OS=Shewanella frigidimarina (strain NCIMB 400) GN=asnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E LR+ RPRTN I AVAR+RN L+ A H F ++GF+++ TP+IT SDCEGAGEMF+V+TL Sbjct: 105 DPDTYPMSAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHQEGFIWVSTPLITASDCEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHEB9 (Asparaginyl-tRNA synthetase OS=Shewanella baltica (strain OS195) GN=asnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E LR+ RPRTN I AVAR+RN L+ A H F ++GF+++ TP+IT SDCEGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHEB8 (Asparaginyl-tRNA synthetase OS=Shewanella baltica (strain OS185) GN=asnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E LR+ RPRTN I AVAR+RN L+ A H F ++GF+++ TP+IT SDCEGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHEB5 (Asparaginyl-tRNA synthetase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=asnS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E LR+ RPRTN I AVAR+RN L+ A H F ++GF+++ TP+IT SDCEGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_XANOR (Asparaginyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae GN=asnS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.423e-19 Identity = 49/83 (59.04%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 10 VGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 VG V DP YPI +T EFLR+ RPRTN AV RIRN LA A H F + GF +I TPIITTSD EGAG+MF+V+TL Sbjct: 98 VGWVEDPLTYPIQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTL 180
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_XANOM (Asparaginyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=asnS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.423e-19 Identity = 49/83 (59.04%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 10 VGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 VG V DP YPI +T EFLR+ RPRTN AV RIRN LA A H F + GF +I TPIITTSD EGAG+MF+V+TL Sbjct: 98 VGWVEDPLTYPIQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTL 180 The following BLAST results are available for this feature:
BLAST of CX294126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294126 ID=CX294126; Name=CX294126; organism=Citrus clementina; type=EST; length=502bpback to top |