CX294126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHESH (Asparaginyl-tRNA synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=asnS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.742e-18 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E LR+ RPRTN I AVAR+RN+L+ A H F +QGF+++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEHLRELAHLRPRTNIIGAVARVRNSLSQAIHRFYHEQGFIWVSTPLITASDAEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_BAUCH (Asparaginyl-tRNA synthetase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=asnS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.742e-18 Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 +P YPI K +LEFLR+ RPRTN I AV R+R+ LA A H F+ +GF ++ TP+ITT +CEGAGEMF+V+TL Sbjct: 106 NPETYPITAKKHSLEFLREVAHLRPRTNIIGAVTRVRHTLAQAIHRFMHIEGFFWVSTPLITTFNCEGAGEMFRVSTL 183
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SODGM (Asparaginyl-tRNA synthetase OS=Sodalis glossinidius (strain morsitans) GN=asnS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.581e-18 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F+ +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSVEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFMDEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_XYLFT (Asparaginyl-tRNA synthetase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 10 VGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 VG V DP YPI + +LEFLR+ RPRTN AVARIR+ L+ A H F + G+ +I TPIITTSD EGAG+MF+V+TL Sbjct: 100 VGWVEDPETYPIQPKQHSLEFLREVAHLRPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_XYLFA (Asparaginyl-tRNA synthetase OS=Xylella fastidiosa GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 10 VGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 VG V DP YPI + +LEFLR+ RPRTN AVARIR+ L+ A H F + G+ +I TPIITTSD EGAG+MF+V+TL Sbjct: 100 VGWVEDPETYPIQPKQHSLEFLREVAHLRPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHISS (Asparaginyl-tRNA synthetase OS=Shigella sonnei (strain Ss046) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHIFL (Asparaginyl-tRNA synthetase OS=Shigella flexneri GN=asnS PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHIF8 (Asparaginyl-tRNA synthetase OS=Shigella flexneri serotype 5b (strain 8401) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHIDS (Asparaginyl-tRNA synthetase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SHIBS (Asparaginyl-tRNA synthetase OS=Shigella boydii serotype 4 (strain Sb227) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182 The following BLAST results are available for this feature:
BLAST of CX294126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294126 ID=CX294126; Name=CX294126; organism=Citrus clementina; type=EST; length=502bpback to top |