CX294360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26_NEUCR (40S ribosomal protein S26E OS=Neurospora crassa GN=rps-26 PE=3 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 2.889e-50 Identity = 95/119 (79.83%), Postives = 100/119 (84.03%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVRFNKDG*KINPLQSGKVA 416 MVKKR +NGRNK GRGHVKP+RCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEY+VPKMYLKLQYCVSCAIHGKIV APPPRVR+NKDG K+ P Q K A Sbjct: 1 MVKKRKNNGRNKKGRGHVKPIRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYTVPKMYLKLQYCVSCAIHGKIVRVRSREGRRNRAPPPRVRYNKDGKKVTPTQGAKTA 119
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26B_SCHPO (40S ribosomal protein S26-B OS=Schizosaccharomyces pombe GN=rps26b PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.710e-40 Identity = 75/117 (64.10%), Postives = 93/117 (79.49%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVRFNKDG*KINPLQSGK 410 M +KR +NGRNK+GRGHVK VRC NCSR PKDKAIKR+TIRNMVE+AAIRD+S+ASV++EY++PK+Y+KLQYCVSCAIH ++V PPPRVR+N+DG K+NP K Sbjct: 1 MTQKRRNNGRNKHGRGHVKFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYSEYTIPKLYIKLQYCVSCAIHSRVVRVRSREGRRIRTPPPRVRYNRDGKKVNPTAVAK 117
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26_SCHCO (40S ribosomal protein S26 OS=Schizophyllum commune GN=RPS26 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.487e-38 Identity = 76/112 (67.86%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVRFNKDG*KINP 395 M KKR + GRNK+GRGHV VRCSNCSRC KDKAIKRFT+RNMVESAAIRDISDASV+ EY++PK+Y+K+ YCVSCAIH +V APPPRVR+ KDG K+NP Sbjct: 1 MTKKRRNGGRNKSGRGHVTFVRCSNCSRCVAKDKAIKRFTVRNMVESAAIRDISDASVYPEYAIPKLYIKIAYCVSCAIHSHVVRVRSREGRRNRAPPPRVRW-KDGKKVNP 111
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26A_SCHPO (40S ribosomal protein S26-A OS=Schizosaccharomyces pombe GN=rps26a PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.327e-38 Identity = 72/119 (60.50%), Postives = 91/119 (76.47%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVRFNKDG*KINPLQSGKVA 416 M +KR + GRNK+GRGH K VRC NCSR PKDKAIKR+ IRNMVE+AAIRD+S+ASV++EY++PK+Y+KLQYCVSCAIH ++V PPPRVR+N+DG ++NP K A Sbjct: 1 MTQKRRNCGRNKHGRGHTKFVRCINCSRAVPKDKAIKRWNIRNMVETAAIRDLSEASVYSEYAIPKIYVKLQYCVSCAIHARVVRVRSREGRRIRTPPPRVRYNRDGKRVNPAAIAKTA 119
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26B_YEAST (40S ribosomal protein S26-B OS=Saccharomyces cerevisiae GN=RPS26B PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.818e-36 Identity = 74/119 (62.18%), Postives = 88/119 (73.95%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVRFNKDG*KINPLQSGKVA 416 M KKRASNGRNK GRGHVKPVRC NCS+ PKDKAIKR IRN+VE+AA+RD+S+ASV+ EY++PK Y KL YCVSCAIH +IV APP R RFN+D K++P + K A Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQRPRFNRDN-KVSPAAAAKKA 118
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26A_YEAST (40S ribosomal protein S26-A OS=Saccharomyces cerevisiae GN=RPS26A PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.050e-36 Identity = 73/119 (61.34%), Postives = 88/119 (73.95%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVRFNKDG*KINPLQSGKVA 416 M KKRASNGRNK GRGHVKPVRC NCS+ PKDKAIKR IRN+VE+AA+RD+S+ASV+ EY++PK Y KL YCVSCAIH +IV APP R RFN++ K++P + K A Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQRPRFNREN-KVSPADAAKKA 118
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26_RAT (40S ribosomal protein S26 OS=Rattus norvegicus GN=Rps26 PE=3 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 8.444e-34 Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVR 365 M KKR +NGR K GRGHV+P+RC+NC+RC PKDKAIK+F IRN+VE+AA+RDIS+ASVF Y +PK+Y+KL YCVSCAIH K+V PPPR R Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFR 102
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26_PIG (40S ribosomal protein S26 OS=Sus scrofa GN=RPS26 PE=3 SV=4) HSP 1 Score: 142.895 bits (359), Expect = 8.444e-34 Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVR 365 M KKR +NGR K GRGHV+P+RC+NC+RC PKDKAIK+F IRN+VE+AA+RDIS+ASVF Y +PK+Y+KL YCVSCAIH K+V PPPR R Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFR 102
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26_MOUSE (40S ribosomal protein S26 OS=Mus musculus GN=Rps26 PE=2 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 8.444e-34 Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVR 365 M KKR +NGR K GRGHV+P+RC+NC+RC PKDKAIK+F IRN+VE+AA+RDIS+ASVF Y +PK+Y+KL YCVSCAIH K+V PPPR R Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFR 102
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26_MACFA (40S ribosomal protein S26 OS=Macaca fascicularis GN=RPS26 PE=3 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 8.444e-34 Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVR 365 M KKR +NGR K GRGHV+P+RC+NC+RC PKDKAIK+F IRN+VE+AA+RDIS+ASVF Y +PK+Y+KL YCVSCAIH K+V PPPR R Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFR 102 The following BLAST results are available for this feature:
BLAST of CX294360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294360 ID=CX294360; Name=CX294360; organism=Citrus clementina; type=EST; length=518bpback to top |