CX294813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 6.855e-31 Identity = 72/175 (41.14%), Postives = 98/175 (56.00%), Query Frame = 3 Query: 60 LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 L EA V CGYE S WG E+G +YG+ ED LTG +H++GWRS YC+P AF G A + + Q RWA G +EILFS+ PI G+L+F + AY+ + + SIP L Y LPA C+ TN +P++ + L+LFL +LE +G+ I WW N Sbjct: 734 LKEAIHVISCGYEDKSDWGMEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPITSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRN 908
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.527e-30 Identity = 71/175 (40.57%), Postives = 98/175 (56.00%), Query Frame = 3 Query: 60 LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 L EA V CGYE S WG E+G +YG+ ED LTG +H++GWRS YC+P AF G A + + Q RWA G +EILFS+ PI G+L+F + AY+ + L SIP L Y LPA C++T +P++ + ++LFL +LE +G+ I WW N Sbjct: 742 LKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRN 916
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.527e-30 Identity = 71/175 (40.57%), Postives = 98/175 (56.00%), Query Frame = 3 Query: 60 LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 L EA V CGYE S WG E+G +YG+ ED LTG +H++GWRS YC+P AF G A + + Q RWA G +EILFS+ PI G+L+F + AY+ + L SIP L Y LPA C++T +P++ + ++LFL +LE +G+ I WW N Sbjct: 742 LKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRN 916
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.443e-30 Identity = 69/175 (39.43%), Postives = 98/175 (56.00%), Query Frame = 3 Query: 60 LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 L EA V CGYE + WG E+G +YG+ ED LTG +H++GWRS YC+P AF G A + + Q RWA G +EILFS+ PI G+L+F + AY+ + L SIP L Y LPA C++T +P++ + ++LF+ +LE +G+ I WW N Sbjct: 750 LKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLFISIFATGILEMRWSGVGIDEWWRN 924
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 9.898e-30 Identity = 66/175 (37.71%), Postives = 98/175 (56.00%), Query Frame = 3 Query: 60 LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 L EA V CGYE + WG E+G +YG+ ED LTG +H++GW S YC+P AF G A + + Q RWA G +EIL S+ PI G+L+ + +AY+ + + + SIP L Y LPA+C+ITN+ +P++ L + LF +LE + +++ WW N Sbjct: 736 LKEAIHVISCGYEAKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILELKWSDVALEDWWRN 910
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 9.898e-30 Identity = 69/182 (37.91%), Postives = 99/182 (54.40%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 ++N S + EA V CGYE + WG E+G +YG+ ED LTG +H +GW+S YC+P AF G A + + Q RWA G +EI FS+ P+ GKL+ + LAY+ + + SIP L Y +PA C++T +P + + LALFL +LE +G+SI W N Sbjct: 710 ATNTSSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSINDLWRN 891
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 9.898e-30 Identity = 67/182 (36.81%), Postives = 103/182 (56.59%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 ++N + L EA V CGYE + WG E+G +YG+ ED LTG +H++GW S YC P AF G A + + Q RWA G +EIL S+ PI G+L+ + +AY+ + + + SIP + Y LPA+C+IT+ +P++ + + LF+ + +LE +G+SI WW N Sbjct: 742 TTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRN 923
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.205e-29 Identity = 67/183 (36.61%), Postives = 101/183 (55.19%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPI-LATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 S+N S + EA V CGYE + WG E+G +YG+ ED LTG +H +GWRS YC+PI AF G A + + Q RWA G +EI S+ P+ G+L++ Q L+Y+ + + S+P + Y LPA C++T +P + + L LF+ + ++LE +G+ I WW N Sbjct: 650 SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRN 832
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 2.205e-29 Identity = 67/183 (36.61%), Postives = 101/183 (55.19%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPI-LATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 S+N S + EA V CGYE + WG E+G +YG+ ED LTG +H +GWRS YC+PI AF G A + + Q RWA G +EI S+ P+ G+L++ Q L+Y+ + + S+P + Y LPA C++T +P + + L LF+ + ++LE +G+ I WW N Sbjct: 650 SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRN 832
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.205e-29 Identity = 67/182 (36.81%), Postives = 99/182 (54.40%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 S+N + L EA V CGYE + WG E+G +YG+ ED LTG +H++GW S YC+P F G A + + Q RWA G +EIL S+ PI G+L+ + LAY+ + + + SIP + Y LPA C++TN +P++ + + LF +LE +G+ I WW N Sbjct: 737 STNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRN 918 The following BLAST results are available for this feature:
BLAST of CX294813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294813 ID=CX294813; Name=CX294813; organism=Citrus clementina; type=EST; length=590bpback to top |