CX294813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3) HSP 1 Score: 193.356 bits (490), Expect = 7.290e-49 Identity = 93/181 (51.38%), Postives = 116/181 (64.09%), Query Frame = 3 Query: 45 NISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNN 587 +IS ++ A V+ C YE G+ WG EVG YG+ ED LTG IH+ GWRS P AFLGCA GPA + Q KRWATGL EIL S+ NP+L ++ LQFRQCLAYL + W +R ELCY L YC++TN +FL K E I LALFL Y Y +EY++ GLS+R+WW N+ Sbjct: 465 DISSHIEVAKEVSSCNYESGTHWGLEVGWAYGSMTEDILTGQRIHAAGWRSAKLETEPPAFLGCAPTGGPACLTQFKRWATGLFEILISQNNPLLLSIFKHLQFRQCLAYLTLYVWAVRGFVELCYELLVPYCLLTNQSFLSKASENCFNITLALFLTYNTYNFVEYMECGLSVRAWWNNH 645
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 192.586 bits (488), Expect = 1.243e-48 Identity = 93/181 (51.38%), Postives = 120/181 (66.30%), Query Frame = 3 Query: 45 NISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNN 587 +IS ++ A V+ C Y+ G+ WG EVG +YG+ ED LTG IH+ GWRS + P AF+G A GPA + Q KRWATG EI+ S+ NPILAT+ +L+FRQCLAYL +L W LR+ ELCY L YCI+TN +FLPK E +PLALF+ Y Y +EY+ GLS R+WW N+ Sbjct: 434 DISSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFELCYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFMEYMACGLSARAWWNNH 614
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.243e-48 Identity = 93/181 (51.38%), Postives = 120/181 (66.30%), Query Frame = 3 Query: 45 NISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNN 587 +IS ++ A V+ C Y+ G+ WG EVG +YG+ ED LTG IH+ GWRS + P AF+G A GPA + Q KRWATG EI+ S+ NPILAT+ +L+FRQCLAYL +L W LR+ ELCY L YCI+TN +FLPK E +PLALF+ Y Y +EY+ GLS R+WW N+ Sbjct: 434 DISSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFELCYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFMEYMACGLSARAWWNNH 614
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.000e-47 Identity = 91/179 (50.84%), Postives = 119/179 (66.48%), Query Frame = 3 Query: 45 NISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWV 581 N+ SL+ A + C YEY +SWG +G LY +T ED T + IHS+GW S Y P P AFLGC GP M QQ+RWATGLLEILF+K++P++ K++FRQ LAYL++ +WGLRSIPEL Y LPAYC++ NS PK ++I L I+ LYTL E++ G SI+SW+V Sbjct: 425 NLKDSLETAQEMGHCHYEYQTSWGKNIGWLYDSTTEDVNTSIGIHSRGWTSSYIFPDPPAFLGCMPQGGPEVMVQQRRWATGLLEILFNKQSPLIGMFCRKIRFRQSLAYLYVFSWGLRSIPELFYCLLPAYCLLHNSALFPKGVYLGIII--TLVGIHCLYTLWEFMNLGFSIQSWYV 601
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 1.520e-46 Identity = 92/181 (50.83%), Postives = 114/181 (62.98%), Query Frame = 3 Query: 45 NISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNN 587 +IS +D A VA C YE G+ WG EVG +YG+ ED LTG IH+ GWRS P AF+GCA GPA + Q KRWA+G LEIL S+ NPIL T LQFRQCLAYL W +R+ ELCY L YC+++N +FLPK E I LALF+ Y Y +E+I+ G S R+ W N+ Sbjct: 423 DISSCVDVAKEVAACNYEIGTCWGQEVGWVYGSLTEDVLTGQRIHAAGWRSTLMEIEPPAFMGCAPNGGPACLTQLKRWASGFLEILISRNNPILTTTFKSLQFRQCLAYLHSYVWPVRAPFELCYALLGPYCLLSNQSFLPKTSEDGFYIALALFIAYNTYMFMEFIECGQSARACWNNH 603
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 7.544e-46 Identity = 86/181 (47.51%), Postives = 121/181 (66.85%), Query Frame = 3 Query: 42 SNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 + ++ SL+ A V C +EY +SWG +G LY +TAED T + IHS+GW S Y P P AFLG P GP M QQ+RWATGLLE+LF+K++P++ K++FRQ LAYL+I TWGLRSIPEL Y LPAYC++ N+ PK +++ L ++ LY+L E++ G S++SW+ + Sbjct: 424 NTLANSLEAAQEVGHCHFEYQTSWGKTIGWLYESTAEDANTSIGIHSRGWTSSYISPKPPAFLGAMPPGGPEAMLQQRRWATGLLEVLFNKQSPLIGMFCRKIRFRQSLAYLYIFTWGLRSIPELIYCLLPAYCLLHNAALFPKGVYLGIVV--TLVGMHCLYSLWEFMSLGFSVQSWFAS 602
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 1.990e-38 Identity = 84/179 (46.93%), Postives = 114/179 (63.69%), Query Frame = 3 Query: 48 ISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 ++ S++ A V C YEY +SWG+ +G LY + AED T + IHS+GW S Y P AFLG P + QQ+RWATG +EILF+K++P+ K++FRQ LAYL I+T LRSIPEL Y LPAYC++ NST PK + I + L I+ LYTL E++ G S++SW V+ Sbjct: 427 LTNSIEAAREVGHCQYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDTPAFLGSMPAGVPEALLQQRRWATGWIEILFNKQSPLRGLFSKKIRFRQRLAYLCIITC-LRSIPELIYCLLPAYCLLHNSTLFPK--GLYLGITVTLVGIHCLYTLWEFMSLGYSVQSWLVS 602
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.901e-37 Identity = 81/179 (45.25%), Postives = 114/179 (63.69%), Query Frame = 3 Query: 48 ISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 ++ S++ A V C YE +SWG +G LY + +ED T + IHS+GW S Y P P AFLG P G M QQ+RWATG +E+LF+K++P+L KL+FRQ +AYL + + +RSIPEL Y LPAYC++ NS PK + I + L ++ LYTL E++ G SI+SW+V+ Sbjct: 426 LTNSIEAAQEVGHCDYESQTSWGKTIGWLYDSMSEDMNTSIGIHSRGWTSSYIAPDPPAFLGSMPPGGLEAMIQQRRWATGSIEVLFNKQSPLLGLFCRKLRFRQRVAYLCV-SICVRSIPELIYCLLPAYCLLHNSALFPK--GLCLGITMLLAGMHCLYTLWEFMCLGHSIQSWYVS 601
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 5.419e-36 Identity = 77/180 (42.78%), Postives = 115/180 (63.89%), Query Frame = 3 Query: 45 NISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 +++ ++ A V C YEY +SWG+ +G LY + AED T + IH +GW S + P P AFLG GP + Q +RWATG +E+LF+K++P++ K++FRQ LAY W+L +RSIPEL Y LPAYC++ NS PK P + I + L ++ LYTL +++ G S++SW+V+ Sbjct: 425 SLANLVEAAQEVGHCHYEYQTSWGN-LGWLYDSVAEDTNTSIGIHLRGWTSSFISPDPPAFLGSTPSVGPEAIVQHRRWATGSIEVLFNKQSPLIG-FRRKIKFRQRLAYFWVLMC-IRSIPELVYCLLPAYCLLNNSALFPK--GPCLGIIVTLVGMHCLYTLWQFMILGFSVKSWYVS 599
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 4.587e-35 Identity = 74/179 (41.34%), Postives = 112/179 (62.57%), Query Frame = 3 Query: 45 NISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWV 581 +++ ++ A V C YEY +SWG+ +G +Y + AED T + IH +GW S + P P AF+G G + QQ+RWATG +E+LF+K++P + GK++FRQ LAY W L LRSIPEL Y LPAYC++ +S PK P + + L ++ LY+L +++ G S++SW+V Sbjct: 425 SLANLIEAAQEVGHCHYEYQTSWGN-LGWMYDSVAEDINTSVGIHLRGWTSSFISPDPPAFIGSTPTLGLEAIVQQRRWATGAIEVLFNKQSPFMGMFHGKIKFRQRLAYFWALMC-LRSIPELIYCLLPAYCLLHDSALFPK--GPCLCTIVTLVGMHCLYSLWQFMSLGFSVQSWYV 599 The following BLAST results are available for this feature:
BLAST of CX294813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294813 ID=CX294813; Name=CX294813; organism=Citrus clementina; type=EST; length=590bpback to top |