CX294813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.205e-29 Identity = 67/182 (36.81%), Postives = 99/182 (54.40%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 S+N + L EA V CGYE + WG E+G +YG+ ED LTG +H++GW S YC+P F G A + + Q RWA G +EIL S+ PI G+L+ + LAY+ + + + SIP + Y LPA C++TN +P++ + + LF +LE +G+ I WW N Sbjct: 737 STNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRN 918
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.429e-28 Identity = 69/183 (37.70%), Postives = 100/183 (54.64%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPIL-ATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 SS+ + L EA V CGYE + WG E+G +YG+ ED LTG +H +GWRS YC+P AF G A + + Q RWA G +EI FS+ +P+L G L++ + +Y+ + S+P L Y LPA C++T +P + L +ALF+ +LE +G+SI WW N Sbjct: 715 SSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRN 897
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.429e-28 Identity = 69/183 (37.70%), Postives = 100/183 (54.64%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPIL-ATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 SS+ + L EA V CGYE + WG E+G +YG+ ED LTG +H +GWRS YC+P AF G A + + Q RWA G +EI FS+ +P+L G L++ + +Y+ + S+P L Y LPA C++T +P + L +ALF+ +LE +G+SI WW N Sbjct: 715 SSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRN 897
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.429e-28 Identity = 70/183 (38.25%), Postives = 101/183 (55.19%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPI-LATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 SS+ + L EA V CGYE + WG E+G +YG+ ED LTG +H +GWRS YC+P AF G A + + Q RWA G +EI FS+ +P+ GKL++ + AY + SIP L Y LPA C++T+ +P + L ++LF+ + +LE +G+SI WW N Sbjct: 688 SSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRN 870
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.867e-28 Identity = 68/183 (37.16%), Postives = 100/183 (54.64%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPI-LATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 S N S + EA V CGYE + WG E+G +YG+ ED LTG +H +GWRS YC+P+ AF G A + + Q RWA G +EI S+ P+ G+L+ Q LAY+ + + S+P + Y LPA C++T +P + ++ L LF+ L ++LE +G+SI W N Sbjct: 645 SVNPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGCSGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRN 827
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.438e-28 Identity = 68/182 (37.36%), Postives = 99/182 (54.40%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 S++ + L EA V CGYE + WG E+G +YG+ ED LTG +H GWRS YC+P AF G A + + Q RWA G +EI FSK P+ G L+F + +Y+ + + SIP L Y LPA C++T P++ L ++LF+ + +LE +G++I WW N Sbjct: 754 SASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSITEDILTGFKMHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSKHCPLWYGYGGGLKFLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWRN 935
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.184e-28 Identity = 65/184 (35.33%), Postives = 98/184 (53.26%), Query Frame = 3 Query: 33 GYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 G +++ + + EA V CGYE + WG E+G +YG+ ED LTG +H +GW+S YC P AF G A + + Q RWA G +EI S+ P+ G+L++ + AY + + SIP L Y +PA C++T +P + + +ALFL +LE +G+SI WW N Sbjct: 722 GAAADPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCTPARAAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGRLKWLERFAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSIIATGVLELRWSGVSIEDWWRN 905
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 9.264e-28 Identity = 68/189 (35.98%), Postives = 102/189 (53.97%), Query Frame = 3 Query: 24 KTGGYSSNISRS--LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 + GG + N S + L EA +V CGYE + WG E+G +YG+ ED LTG +HS GWRS YC P AF G A + + Q RWA G +EI S+ PI G L++ + L+Y+ + + S+P + Y +LPA C++T +P++ ++ +ALF + +LE + I WW N Sbjct: 740 ENGGMARNASPACLLKEAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKLAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSLPLIVYCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRN 928
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 9.264e-28 Identity = 70/189 (37.04%), Postives = 102/189 (53.97%), Query Frame = 3 Query: 24 KTGGYSSNISRS--LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 + GG + N S + L EA +V CGYE + WG E+G +YG+ ED LTG +HS GWRS YC P AF G A + + Q RWA G +EI S+ PI G L++ + L+Y+ + + SIP L Y +LPA C++T +P++ ++ +ALF + +LE + I WW N Sbjct: 725 ENGGLARNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKIPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSIPLLVYCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRN 913
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.520e-27 Identity = 65/187 (34.76%), Postives = 101/187 (54.01%), Query Frame = 3 Query: 30 GGYSSNISRS--LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 GG SN++ + L E+ +V CGYE + WG E+G +YG+ ED LTG +H GWRS YC+P AF G A + + Q RWA G +EI S+ PI G L++ + +Y+ + + S+P L Y +LPA C++T +P++ ++ L +F+ + +LE + I WW N Sbjct: 745 GGVPSNVNPASLLRESIQVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQWGKIGIDDWWRN 931 The following BLAST results are available for this feature:
BLAST of CX294813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294813 ID=CX294813; Name=CX294813; organism=Citrus clementina; type=EST; length=590bpback to top |