CX294813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 8.116e-24 Identity = 60/170 (35.29%), Postives = 88/170 (51.76%), Query Frame = 3 Query: 69 AHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWW 578 AHRVA C YE ++WG ++G YG+ ED TG +H +GWRS +C P AF G + S + QQKRWA GLLE+ S+ +PI + + + Y W S+P + Y LP ++ S+ PK +P + + LFL LL+++ G + WW Sbjct: 438 AHRVAGCIYELNTNWGSKIGFRYGSLVEDYYTGYRLHCEGWRSVFCRPKRAAFCGDSPKSLIDVVSQQKRWAIGLLEVAISRYSPITYG-VKSMGLVTGVGYCQYACWAFWSLPLIVYGFLPQLALLYQSSVFPKSSDPWFWLYIVLFLGAYGQDLLDFVLEGGTYGGWW 606
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.973e-23 Identity = 62/174 (35.63%), Postives = 96/174 (55.17%), Query Frame = 3 Query: 66 EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKL-YTLLEYIQAGLSIRSWWVN 584 E+ V C YE + WGD VG +YG+ ED +TG +H++GWRS YC+ +F G A + + Q RWATG +EI FS+ N ILA+ +L+F Q LAYL + + S+ + Y LPA+ + + F+ + + L+ L + I + +LE +G+ + WW N Sbjct: 780 ESVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDSFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAILAS--KRLKFLQRLAYLNVGIYPFTSLFLILYCFLPAFSLFSGQ-FIVRTLSISFLVYLLMITICLIGLAVLEVKWSGIGLEEWWRN 950
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 8.973e-23 Identity = 61/173 (35.26%), Postives = 90/173 (52.02%), Query Frame = 3 Query: 66 EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 EA V C YE + WGD VG +YG+ ED +TG +H++GWRS YC+ AFLG A + + Q RWATG +EI FS+ N LA+ KL Q ++YL + + SI L Y +PA + + + K+ + L + + +LE +G+ + WW N Sbjct: 818 EAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFLGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFLAS--RKLMLLQRISYLNVGIYPFTSIFLLVYCFIPALSLFSGFFIVQKLDIAFLCYLLTMTITLVALGILEVKWSGIELEDWWRN 988
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.172e-22 Identity = 60/173 (34.68%), Postives = 92/173 (53.18%), Query Frame = 3 Query: 66 EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 EA V C YE + WG VG +YG+ ED +TG +H++GW+S YC+ AF G A + + Q RWATG +EI FS+ N +LA+ K++F Q +AYL + + SI + Y LPA + + + + + L + L + +LE +G+S+ WW N Sbjct: 844 EAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS--RKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRN 1014
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.172e-22 Identity = 60/173 (34.68%), Postives = 92/173 (53.18%), Query Frame = 3 Query: 66 EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 EA V C YE + WG VG +YG+ ED +TG +H++GW+S YC+ AF G A + + Q RWATG +EI FS+ N +LA+ K++F Q +AYL + + SI + Y LPA + + + + + L + L + +LE +G+S+ WW N Sbjct: 844 EAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS--RKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRN 1014
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.172e-22 Identity = 59/173 (34.10%), Postives = 92/173 (53.18%), Query Frame = 3 Query: 66 EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 EA V C YE + WG +G +YG+ ED +TG +H++GW+S YC+ AF G A + + Q RWATG +EI FS+ N +LA+ K++ Q +AYL + + SI + Y LPA + + + + ++ L + + L LLE +G+S+ WW N Sbjct: 819 EAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS--SKMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRN 989
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.531e-22 Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 3 Query: 66 EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 EA V C YE + WG VG +YG+ ED +TG +H++GWRS YC+ AF G A + + Q RWATG +EI FS+ N I AT +++F Q +AY + + S+ + Y LPA + + + + ++ L++ L + +LLE +G+++ WW N Sbjct: 855 EAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAIFAT--RRMKFLQRVAYFNVGMYPFTSLFLIVYCILPAISLFSGQFIVQSLDITFLIYLLSITLTLCMLSLLEIKWSGITLHEWWRN 1025
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.611e-22 Identity = 58/168 (34.52%), Postives = 82/168 (48.81%), Query Frame = 3 Query: 78 VADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLI-YKLYTLLEYIQAGLSIRSWW 578 +A C YE + WG E+G YG ED +TGL I +GW+S Y P AFLG A + + QQ+RW+ G +I+ SK +P+ GK+ L Y W S+P L Y L + C+ PKV + IP + Y+L E++ G + R WW Sbjct: 418 LASCTYEENTQWGKEMGVKYGCPVEDVITGLTIQCRGWKSAYLNPEKQAFLGVAPTNLHQMLVQQRRWSEGDFQIMLSKYSPVWYGK-GKISLGLILGYCCYCLWAPSSLPVLIYSVLTSLCLFKGIPLFPKVSS-SWFIPFGYVTVAATAYSLAEFLWCGGTFRGWW 583
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.611e-22 Identity = 63/176 (35.80%), Postives = 91/176 (51.70%), Query Frame = 3 Query: 57 SLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 +++EA V C YE + WG VG +YG+ ED +TG +H KGWRS YC+ P AF G A + + Q RWATG +EI FS+ N I A KL+ Q +AYL + + SI L Y LP + + + + ++ L + L +LE +G+S+ WW N Sbjct: 651 TVNEAVNVISCWYEDKTEWGFNVGWIYGSVTEDVVTGFRMHEKGWRSFYCVTEPDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAIFAG--PKLKLLQRIAYLNVGIYPFTSIFILTYCFLPPLSLFSGHFVVETLTGSFLIYLLIITLSLCGLAVLEVKWSGISLEEWWRN 824
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.453e-22 Identity = 62/173 (35.84%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 60 LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWW 578 L AH VA C YEY ++WG ++G YG+ ED TG ++H +GWRS +C P AF G + + QQ RWA GL E+ FSK +PI I L L Y SIP Y LP +I+ + PK +P + + LF L +++ G + R WW Sbjct: 416 LSLAHNVAGCIYEYNTNWGSKIGFRYGSLVEDYYTGFMLHCEGWRSVFCNPKKAAFYGDSPKCLVDLVGQQIRWAVGLFEMSFSKYSPITYG-IKSLDLLMGLGYCNSPFKPFWSIPLTVYGLLPQLALISGVSVFPKASDPWFWLYIILFFGAYAQDLSDFLLEGGTYRKWW 587 The following BLAST results are available for this feature:
BLAST of CX294813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294813 ID=CX294813; Name=CX294813; organism=Citrus clementina; type=EST; length=590bpback to top |