CX294813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.816e-22 Identity = 61/179 (34.08%), Postives = 94/179 (52.51%), Query Frame = 3 Query: 57 SLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLI---YKLYTLLEYIQAGLSIRSWWVN 584 ++ EA V YE + WG ++G +YG ED +TG +H KGWRS YC PHAF+G A + + Q RW+TG LEI FS+ NP+ + L Q +AY+ I T+ ++ + Y +PA +T VQ PT + + L ++ + +LE AG+++ W+ N Sbjct: 604 AIAEAVMVTAAAYEKKTGWGSDIGWVYGTVTEDVVTGYRMHIKGWRSRYCSIYPHAFIGTAPINLTERLFQVLRWSTGSLEIFFSRNNPLFGSTF--LHPLQRVAYINITTYPFTALFLIFYTTVPALSFVTGHFI---VQRPTTMFYVYLAIVLGTLLILAVLEVKWAGVTVFEWFRN 777
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.296e-21 Identity = 63/189 (33.33%), Postives = 89/189 (47.09%), Query Frame = 3 Query: 21 RKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPT-VLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 R +S + ++ EA + C YE G++WG +VG +YG ED TG +H +GWRS Y P AF G A + + Q RWA G LEI FS+ N +LA +L Q AYL + S+ + Y PA +I PT V AL + +LE +G+++ WW N Sbjct: 485 RAEQSHSRDDGDAIAEASALVSCAYEDGTAWGRDVGWVYGTVTEDVATGFCMHRRGWRSAYYAAAPDAFRGTAPINLADRLHQVLRWAAGSLEIFFSRNNALLAGGRRRLHPLQRAAYLNTTVYPFTSLFLMAYCLFPAIPLIAGGGGWNAAPTPTYVAFLAALMVTLAAVAVLETRWSGIALGEWWRN 673
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.210e-21 Identity = 56/173 (32.37%), Postives = 90/173 (52.02%), Query Frame = 3 Query: 66 EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 EA V C YE + WG VG +YG+ ED +TG +H++GW+S YC+ AF G A + + Q RWATG +EI FS+ N + A+ K++ Q +AYL + + S+ + Y LPA + + + + + L + + L +LE +G+++ WW N Sbjct: 799 EAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFAS--SKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRN 969
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.210e-21 Identity = 56/173 (32.37%), Postives = 90/173 (52.02%), Query Frame = 3 Query: 66 EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 EA V C YE + WG VG +YG+ ED +TG +H++GW+S YC+ AF G A + + Q RWATG +EI FS+ N + A+ K++ Q +AYL + + S+ + Y LPA + + + + + L + + L +LE +G+++ WW N Sbjct: 799 EAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFAS--SKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRN 969
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.431e-21 Identity = 56/173 (32.37%), Postives = 89/173 (51.45%), Query Frame = 3 Query: 66 EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 EA V C YE + WG +G +YG+ ED +TG +H++GW+S YC+ AF G A + + Q RWATG +EI FS+ N A+ +++ Q +AYL + + S + Y LPA + + + + ++ L + + L LLE +G+S+ WW N Sbjct: 819 EAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFFAS--PRMKILQRIAYLNVGIYPFTSFFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRN 989
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.399e-21 Identity = 58/174 (33.33%), Postives = 90/174 (51.72%), Query Frame = 3 Query: 66 EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCL-PIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 EA V C YE + WG +G +YG+ ED +TG +H++GWRS YC+ P AF G A + + Q RWATG +EI FS+ N + A+ +++ Q +AY + S+ L Y LPA + + + ++ + L + L L LLE +G+++ WW N Sbjct: 876 EAIGVISCFYEEKTEWGRRIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTPRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFAS--PRMKLLQRVAYFNAGMYPFTSVFLLAYCLLPAVSLFSGKFIVQRLSATFLAFLLVITLTLCLLALLEIKWSGITLHEWWRN 1047
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.286e-20 Identity = 59/177 (33.33%), Postives = 91/177 (51.41%), Query Frame = 3 Query: 57 SLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTF-LPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 ++ E V C YE G+ WGD VG +Y ED +TG +H KGWRS YC P AF G A + + Q RW+ G LE+ FS+ P+LA +L+ Q +AY + + + ++ + Y LP + + F + K V +A+ + ++ L+E AGL++ WW N Sbjct: 533 AMAEVEEVMTCAYEDGTEWGDGVGWVYDIATEDVVTGFRLHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSRNCPLLAGC--RLRPMQRVAYANMTAYPVSALFMVVYDLLPVIWLSHHGEFHIQKPFSTYVAYLVAVIAMIEVIGLVEIKWAGLTLLDWWRN 707
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.861e-19 Identity = 56/172 (32.56%), Postives = 85/172 (49.42%), Query Frame = 3 Query: 60 LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSW 575 L E C YE G+ WG +VG +Y ED +TG +H GWRS YC P AF G A + + Q RW+ G LE+ FS P+LA +L F Q +AY+ + + + S+ L Y+ P I ++ K VL + + + ++ ++E AGL++ W Sbjct: 546 LQELSDAMACAYEDGTDWGKDVGWVYNIATEDVVTGFRLHRTGWRSMYCRMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSHNCPLLAG--RRLNFMQRIAYINMTGYPVTSVFLLFYLLFPVIWIFRGIFYIQKPFPTYVLYLVIVIFMSEMIGMVEIKWAGLTLLDW 715
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.861e-19 Identity = 59/178 (33.15%), Postives = 83/178 (46.63%), Query Frame = 3 Query: 51 SRSLDEAHR-VADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKL-YTLLEYIQAGLSIRSWW 578 + L+E R + C YE+ + WG E G YG ED TGL I +GWRS Y P FLG S + KRW G L+I S+ +P L GK++ + Y W + S P L Y+ +P+ C + + P+ P IP A ++ +L E +Q G S WW Sbjct: 423 ANELEEMGRSLVTCTYEHNTIWGIEKGVRYGCPLEDVTTGLQIQCRGWRSVYYNPKRKGFLGMTPTSLGQILVLYKRWTEGFLQISLSRYSPFLLG-HGKIKLGLQMGYSVCGFWAVNSFPTLYYVTIPSLCFLNGISLFPEKTSPW-FIPFAYVMVAAYSCSLAESLQCGDSAVEWW 598
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.769e-16 Identity = 52/175 (29.71%), Postives = 85/175 (48.57%), Query Frame = 3 Query: 60 LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 ++E V ++ + WG VG +Y ED +TG IH +GWRS YC AF G A + + Q RW+ G LE+ FS NP++ +LQ Q ++YL + + + S+ L Y P +I + ++ + V+ L + L+ + LE AG++ +W N Sbjct: 542 VNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPLIGG--RRLQPLQRVSYLNMTIYPVTSLFILLYAISPVMWLIPDEVYIQRPFTRYVVYLLVIILMIHMIGWLEIKWAGITWLDYWRN 714 The following BLAST results are available for this feature:
BLAST of CX294813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294813 ID=CX294813; Name=CX294813; organism=Citrus clementina; type=EST; length=590bpback to top |