CX295630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295630 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.906e-36 Identity = 99/235 (42.13%), Postives = 122/235 (51.91%), Query Frame = 3 Query: 54 MCGGALIADYDEVRPVRRERKLTSEDLWSEF--GSISDLLGLDYNGKSHPKQPLKVKNEKAEDSSNKAARVEGKEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF--------------XXXXXXXXXXXXKKRCMPS---PELTQPRFETIGTPPAPAPSPWVGFGYQNEFYQ-PRAVDDEFELKPAISSLESFLGLE 698 MCGGA+I+DY + + RKLT+E+LWSE + D G K HP + VK E + + A GK +K RKN+YRGIR+RPWGKWAAEIRDP KGVRVWLGTFNT K+IRGDKAKLNF KK C+ S EL+QP F P +GFG +EF + +++LK ISSLESFL L+ Sbjct: 1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNVKEEAVK---KEQATEPGKRRK----RKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSESELSQPSF----------PVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELD 218
BLAST of CX295630 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20 Identity = 62/139 (44.60%), Postives = 74/139 (53.24%), Query Frame = 3 Query: 54 MCGGALIADYDEVRPVRRERKLTSEDLWSEFGSISDLLGLDYNGKSHPKQPLKVKNEKAEDSSNKAARVEGKEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 470 MCGGA+I+D+ +WS+ S LG + K ++P+ V E+ +GK R RKNLYRGIRQRPWGKWAAEIRDP KGVRVWLGTF T +IRG KAKLNF Sbjct: 1 MCGGAIISDF----------------IWSKSESEPSQLGSVSSRKK--RKPVSVSEER-----------DGK-----RERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNF 105
BLAST of CX295630 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19 Identity = 66/183 (36.07%), Postives = 80/183 (43.72%), Query Frame = 3 Query: 54 MCGGALIADYDEVRPVRRERKLTSEDLW-----------------SEFGSISDLLGLDYNGKSHPKQ------------------------PLKVKNEKAEDS--SNKAARVEGK-EKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 470 MCGGA+I+D+ P R R++TSE +W S F D+ G P + AE S K ++G EK R RKN YRGIRQRPWGKWAAEIRDP +G R+WLGTF T +RIRG KAK+NF Sbjct: 1 MCGGAIISDFI---PPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNF 180
BLAST of CX295630 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18 Identity = 43/66 (65.15%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 273 KKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 470 K +R RKN +RGIRQRPWGKWAAEIRDP KGVRVWLGTFN+ +RIRG KAK+NF Sbjct: 110 KSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNF 175
BLAST of CX295630 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18 Identity = 44/70 (62.86%), Postives = 49/70 (70.00%), Query Frame = 3 Query: 261 EGKEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 470 E EK ++R RKN YRGIRQRPWGKWAAEIRDP KG R WLGTF+T +RIRG KAK+NF Sbjct: 114 EQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNF 183
BLAST of CX295630 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17 Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 3 Query: 261 EGKEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 470 +GK+K++ R Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT KRIRG KAKLNF Sbjct: 16 DGKKKQSSR-----YKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNF 80
BLAST of CX295630 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16 Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 231 EDSSNKAARVEGKEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 470 E+S +KA E +EKK + YRG+RQRPWGKWAAEIRDP++ RVWLGTF+T R RG+KAKLNF Sbjct: 59 EESMSKAFPEEAREKKRR------YRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNF 132
BLAST of CX295630 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16 Identity = 49/106 (46.23%), Postives = 55/106 (51.89%), Query Frame = 3 Query: 267 KEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNFXXXXXXXXXXXXKKRCMPSPELTQPRFETIGTPPAPAP 584 +EK R R YRG+RQRPWGKWAAEIRDP K RVWLGTF+T RG KAKLNF + PSP + R I TPP+P P Sbjct: 60 QEKSNSRQRN--YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNF-----PEHIRVNPTQLYPSPATSHDRI--IVTPPSPPP 156
BLAST of CX295630 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 37/60 (61.67%), Postives = 39/60 (65.00%), Query Frame = 3 Query: 291 RKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 470 R YRG+RQRPWGKWAAEIRDP+K RVWLGTF T R RG KAKLNF Sbjct: 57 RPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNF 116
BLAST of CX295630 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 55/156 (35.26%), Postives = 75/156 (48.08%), Query Frame = 3 Query: 3 GKTFSSQHTN*KRRKNNMCGGALIADYDEVRPVRRERKLTSEDLWSEFGSISDLLGLDYNGKSHPKQPLKVKNEKAEDSSNKAARVEGKEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTXXXXXXXXXXXXKRIRGDKAKLNF 470 G + SS + KRR+ GGA + V+ LT + +S S S + N S P + +S++ + G + + + YRG+RQRPWGKWAAEIRDP+K RVWLGTF+ R RG+KAKLNF Sbjct: 102 GTSNSSSSSGQKRRREVEEGGA--------KAVKAANTLTVDQYFSGGSSTSKVREASSN-MSGPGPTYEYTTTAT--ASSETSSFSGDQPRRR------YRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNF 240 The following BLAST results are available for this feature:
BLAST of CX295630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295630 ID=CX295630; Name=CX295630; organism=Citrus clementina; type=EST; length=708bpback to top |