CX295642

Overview
NameCX295642
Unique NameCX295642
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295642 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.394e-43
Identity = 94/216 (43.52%), Postives = 135/216 (62.50%), Query Frame = 1 
Query:   73 SKSKILFIGGTGYIGKFIVEASAKAGHPTFVLVRESTLSDPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVASNFFAAYFLPNLSQPGATAPPRDKVVILGDGNPKAVYNKEDDIGTYTIKAVDDPRTLNKSFTLTP 714
            +K++ L +GGTG+IG+FI +AS   G+PTF+LVR   +S PSK+ ++  F+  G  ++ G + + E + K +K+  +DVVIS VG   L DQ+ ++ AIK    IKRF PSEFG+DVDR   VEP  + +  K  +RRAVE  GIP+T +  N  A++   +   P    PP D+  I GDGN KA +   +DIG +T+K +DD RTLNK+    P
Sbjct:   11 TKNRTLVVGGTGFIGQFITKASLGFGYPTFLLVRPGPVS-PSKAVIIKTFQDKGAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRP 225
The following BLAST results are available for this feature:
BLAST of CX295642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN2.394e-4343.52Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionC05074D03SK DroRLeaf1 Citrus clementina cDNA clone C05074D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295642 ID=CX295642; Name=CX295642; organism=Citrus clementina; type=EST; length=736bp
TTCGGCCGAGGACAAACAGAAAAAAAAGGAAAGAATCCCCGAAATTGAAC
TGAATAATTCTCGGTAATGGCGTCGAAAAGCAAGATTCTATTCATCGGCG
GTACAGGGTACATCGGCAAATTCATCGTCGAAGCGAGCGCGAAAGCCGGC
CACCCGACGTTCGTGCTCGTGAGAGAATCCACACTCTCCGATCCTTCCAA
ATCTCAGCTCCTCGATCACTTCAAAAAACTCGGCGTCAATCTCGTCATCG
GAGATGTGTTGAATCACGAGAGCTTGGTGAAGGCGATAAAACAAGTGGAC
GTGGTGATATCAACGGTCGGTCACACTTTATTAGGTGATCAGGTCAAGAT
TATTGCGGCCATTAAAGAAGCTGGTAACATTAAGAGATTCTTCCCTTCAG
AATTTGGGAATGATGTTGATCGAGTCCATGCCGTTGAGCCAGCAAAATCA
GCATTTGCCACAAAGGCAAAAATCCGCCGAGCCGTTGAGGCTGAAGGGAT
TCCGTATACTTATGTAGCGTCGAATTTCTTTGCTGCTTACTTCCTTCCCA
ATTTGTCGCAGCCCGGGGCCACTGCCCCACCTAGGGATAAAGTTGTCATC
TTAGGCGATGGAAATCCAAAAGCTGTTTATAACAAGGAAGATGATATTGG
AACCTATACTATCAAAGCGGTTGATGATCCCAGAACCTTGAACAAATCCT
TTACATTAACCCCCTGGTATATTACTCATTCATGAT
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