CX297867

Overview
NameCX297867
Unique NameCX297867
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19
Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T+++T+EWA+ EL+NN   L KAR E++  VG   +IEESDI  LPYLQ IV+ET             ++S  V + G+ IP   ++ VN WAIGRD + W++P+ F
Sbjct:  302 DTSAATMEWAMAELINNPCVLEKARQEIDAVVGNSRIIEESDIVNLPYLQAIVRET-LRIHPGGPLIVRESSKSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEF 408          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T++ST++WA+ EL+ + + + KA+ EL+  VG+   + ESDI QLPYLQ ++KE               AS   EI G+ IPKG+ +L N WAI RD   W DP +F
Sbjct:  305 DTSASTVDWAIAELIRHPDIMVKAQEELDIVVGRDRPVNESDIAQLPYLQAVIKENFRLHPPTPLSLPHIASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAF 412          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 45/108 (41.67%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T++ ++EWA+ EL+NN + L KAR E++  VGK  ++EESDI  LPYLQ IV+ET             ++S    + G+ IP   ++ VN WAIGRD + W+ P+ F
Sbjct:  309 DTSAVSIEWAMAELINNPDVLEKARQEIDAVVGKSRMVEESDIANLPYLQAIVRET-LRLHPGGPLVVRESSKSAVVCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEF 415          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T+SS +EWA+ E+LN+ + L++A  E++Q +G+   +E+SDI  LPY Q I KET              ++   E+ GF IPK  +++VN WAIGRD   W++P  F
Sbjct:  321 DTSSSVIEWALAEMLNHRQILNRAHEEMDQVIGRNRRLEQSDIPNLPYFQAICKETFRKHPSTPLNLPRISTEACEVDGFHIPKNTRLIVNIWAIGRDPKVWENPLDF 428          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18
Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T++ T+EWA+ EL+NN   L KAR E++  VGK  ++EESDI  LPYLQ IV+ET             ++S    + G+ IP   ++ VN WAIGRD + W++P  F
Sbjct:  310 DTSAVTMEWAMAELINNPGVLEKARQEMDAVVGKSRIVEESDIANLPYLQGIVRET-LRLHPAGPLLFRESSRRAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPLEF 416          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18
Identity = 47/109 (43.12%), Postives = 65/109 (59.63%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            ET++ST+EWA+TEL  N +  +K R EL+  VG+ + ++ESD   LPYL+  VKET             +A     I  + IPK  Q++VNAW IGRD  TW DP +F+
Sbjct:  295 ETSASTIEWAMTELTKNPKITAKLRSELQTVVGERS-VKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWIDPLTFS 402          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18
Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            ET++ST+EWA+TEL  N +  +K R E++  VG+ + ++ESD   LPYL+  VKET             +A     I  + IPK  Q++VNAW IGRD  TW DP +F+
Sbjct:  294 ETSASTIEWAMTELTKNPKITAKIRSEIQTVVGERS-VKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFS 401          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18
Identity = 41/108 (37.96%), Postives = 66/108 (61.11%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +TT+ T EWA+ E++ N     K + E ++ VG   ++ E+D ++LPYLQ +VKE+             +++ADV+I G+ IPKG+ V VN WA+ RD + W +P+ F
Sbjct:  302 DTTAITAEWAMAEMIKNPRVQQKVQEEFDRVVGLDRILTEADFSRLPYLQCVVKESFRLHPPTPLMLPHRSNADVKIGGYDIPKGSNVHVNVWAVARDPAVWKNPFEF 409          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18
Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            +T+SS +EWA+ ELL N   L +A+ E++  +G+     E+DI++LPYLQ I KE               AS   E+ G  IPKG ++ VN WAIGRD S W++P  FN
Sbjct:  308 DTSSSVIEWALAELLKNPIILRRAQEEMDGVIGRDRRFLEADISKLPYLQAICKEAFRKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSVWENPNEFN 416          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18
Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            +T+SS +EWA+ ELL N   L +A+ E++  +G+     E+DI++LPYLQ I KE               AS   E+ G  IPKG ++ VN WAIGRD S W++P  FN
Sbjct:  308 DTSSSVIEWALAELLKNPIILKRAQEEMDGVIGRDRRFLEADISKLPYLQAICKEAFRKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSLWENPNEFN 416          
The following BLAST results are available for this feature:
BLAST of CX297867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
C93A2_SOYBN1.020e-1943.52Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
F3PH_ARATH2.273e-1941.67Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C93A1_SOYBN2.273e-1941.67Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C75A6_CAMME2.273e-1939.81Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C93A3_SOYBN1.128e-1842.59Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C80B2_ESCCA1.473e-1843.12(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA1.473e-1842.20(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C98A3_ARATH1.924e-1837.96Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C75A7_EUSGR1.924e-1842.20Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A5_EUSGR1.924e-1842.20Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]

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Properties
Property NameValue
Genbank descriptionC06006A12SK RindPdig24 Citrus clementina cDNA clone C06006A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297867 ID=CX297867; Name=CX297867; organism=Citrus clementina; type=EST; length=708bp
GAGGTTTTTTCTGAGTCTCAAACGACATTGTTTTATTGAATTTTCGGGGC
TTGACCCGGGGTTTGACCCGGGGTAAATAGCAGCACTCATAAACTTATCT
AATTGCCCAGCGTACTATCAGGAATAATAAGAACTTGGCAGCGCTTGGGG
CTGGCGAGTTCTGGCTAAATTCACTTGCAAATAACTGATGGTATATGTAA
CCAAATACAAATTTGAGTAATCTTGTTTCACTTCATCCTTTTGCGAACTT
CGTAAAAGTAGCTTAGAATCACCACTGCCACAGTAACTGCTACTCCAACT
GCACCTTGAGCTAATATGGTGCAATCATTTGCTGTTGATTTGGAGCCAGA
ACCGGCCTCGTGCCGAATTCGGCACGAGGCTGAAACGACTTCAAGCACAT
TGGAATGGGCAGTAACAGAGCTATTAAACAACTCAGAAGCATTATCAAAA
GCTAGATTGGAGTTGGAACAAAAAGTAGGCAAAGGCAACCTGATTGAGGA
ATCAGACATTACTCAATTACCTTATTTACAAACAATAGTTAAAGAGACCT
TAAGGTTGCACCCGCCAGTGCCGTTGTTACTCCCTCGCAAAGCCTCAGCA
GACGTAGAAATCACAGGCTTCATAATACCAAAGGGTGCGCAAGTTTTGGT
CAATGCATGGGCTATAGGCCGAGATACAAGCACATGGGATGACCCTTACT
CTTTTAAC
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