CX297867

Overview
NameCX297867
Unique NameCX297867
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.277e-26
Identity = 55/108 (50.93%), Postives = 75/108 (69.44%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T+SSTLEWA+TELL N + ++KA+ E++  +G+  ++EESDI++LPYLQ +VKET             KA +D EI GF++ K  QVLVN WAIGRD S WD+P  F
Sbjct:  314 DTSSSTLEWAMTELLKNPKTMAKAQAEIDCVIGQNGIVEESDISKLPYLQAVVKETFRLHTPVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQF 421          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26
Identity = 53/108 (49.07%), Postives = 76/108 (70.37%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T+SSTLEWA+ ELL N + + KA+ E+++ +G+ ++++ESDI+ LPYLQ +VKET             KA +DVE+ GF++PK  QVLVN WAIGRD S W++P  F
Sbjct:  314 DTSSSTLEWAMAELLRNPKTMVKAQAEMDRVLGQNSVVQESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQF 421          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.228e-24
Identity = 52/108 (48.15%), Postives = 72/108 (66.67%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T SST+EWA+TEL  ++E + KA+ E+ Q +G+   ++ESDI  LPYLQ IVKET             K+ +DV+I GF++PK  QV+VN WAIGRD S W++P  F
Sbjct:  316 DTNSSTMEWAMTELFRSTEKMVKAQSEIRQVIGQNGFVQESDIPSLPYLQAIVKET-LRLHPAAPLIPRKSESDVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKF 422          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.918e-24
Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T SST+EWA+ ELL N E + KA+ E++  +G+  ++EESDI+ LPYLQ +VKET             KA +DVE+ GF++PK  QV VN WAIGRD + W++   F
Sbjct:  315 DTNSSTVEWAMAELLRNPETMVKAQAEIDCVIGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRF 422          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23
Identity = 52/108 (48.15%), Postives = 69/108 (63.89%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ETTSS++EWA+TELL + +A++K +LE+ Q +G     EE DI  LPY+Q ++KE              KA  D +  G+ IPKG QVLVNAWAIGRD   WD+P+ F
Sbjct:  274 ETTSSSVEWALTELLRHPQAMAKVKLEILQVIGPNKKFEECDIDSLPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEF 381          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +TTS T+EWA+TELL     +SKA+ ELE+ +GKG++++E D+ +LPYL  IVKE              K    VE++G+ IP G  V VNAWAIGRD + WDD   F
Sbjct:  296 DTTSITIEWAMTELLRKPHIMSKAKEELEKVIGKGSIVKEDDVLRLPYLSCIVKEVLRLHPPSPLLLPRKVVTQVELSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEF 403          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.869e-22
Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ETTSS++EWA+TELL + EA++K + E+ Q +      E+SDI  LPY+Q ++KE+             +   D +  G+ +PK  QVLVNAWAIGRD   WDDP SF
Sbjct:  312 ETTSSSVEWALTELLRHPEAMAKVKTEISQAIEPNRKFEDSDIENLPYMQAVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSF 419          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22
Identity = 50/109 (45.87%), Postives = 68/109 (62.39%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            ET++ TLEWA+  LL N E L KAR E+++K+GK  LI+ESDI  LPYLQ +V ET               + D++I G+ +P+   V+VNAWAI RD   W++P  FN
Sbjct:  303 ETSAVTLEWAMANLLRNPEVLEKARSEIDEKIGKDRLIDESDIAVLPYLQNVVSETFRLFPVAPFLIPRSPTDDMKIGGYDVPRDTIVMVNAWAIHRDPEIWEEPEKFN 411          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22
Identity = 51/107 (47.66%), Postives = 72/107 (67.29%), Query Frame = 1
Query:  385 TTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            T++ TLEWA++ LLN+ + +SKAR E++ +VG   LIEE+D+++LPYL+ IV ET              AS D +I  + +P+G  +LVNAWAI RD +TWDDP SF
Sbjct:  310 TSAVTLEWALSNLLNHPDVISKARDEIDNRVGLDRLIEEADLSELPYLKNIVLETLRLHPATPLLVPHMASEDCKIGSYDMPRGTTLLVNAWAIHRDPNTWDDPDSF 416          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20
Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T+SST+EWA+ EL+ N + L++A+ E+++ VG+  L+ E D+ QL YL+ IVKET              AS   EI G+ IPKG+ +L+N WAI RD + W DP  F
Sbjct:  307 DTSSSTVEWAIAELIRNPKILAQAQQEIDKVVGRDRLVGELDLAQLTYLEAIVKETFRLHPSTPLSLPRIASESCEINGYFIPKGSTLLLNVWAIARDPNAWADPLEF 414          
The following BLAST results are available for this feature:
BLAST of CX297867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
C76C1_ARATH4.277e-2650.93Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76C4_ARATH9.528e-2649.07Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH5.228e-2448.15Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH8.918e-2447.22Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76A1_SOLME1.165e-2348.15Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C76B1_HELTU3.389e-2347.227-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76A2_SOLME2.869e-2245.37Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C81F1_ARATH3.747e-2245.87Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C81D1_ARATH4.893e-2247.66Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
F3PH_PETHY1.205e-2043.52Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC06006A12SK RindPdig24 Citrus clementina cDNA clone C06006A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297867 ID=CX297867; Name=CX297867; organism=Citrus clementina; type=EST; length=708bp
GAGGTTTTTTCTGAGTCTCAAACGACATTGTTTTATTGAATTTTCGGGGC
TTGACCCGGGGTTTGACCCGGGGTAAATAGCAGCACTCATAAACTTATCT
AATTGCCCAGCGTACTATCAGGAATAATAAGAACTTGGCAGCGCTTGGGG
CTGGCGAGTTCTGGCTAAATTCACTTGCAAATAACTGATGGTATATGTAA
CCAAATACAAATTTGAGTAATCTTGTTTCACTTCATCCTTTTGCGAACTT
CGTAAAAGTAGCTTAGAATCACCACTGCCACAGTAACTGCTACTCCAACT
GCACCTTGAGCTAATATGGTGCAATCATTTGCTGTTGATTTGGAGCCAGA
ACCGGCCTCGTGCCGAATTCGGCACGAGGCTGAAACGACTTCAAGCACAT
TGGAATGGGCAGTAACAGAGCTATTAAACAACTCAGAAGCATTATCAAAA
GCTAGATTGGAGTTGGAACAAAAAGTAGGCAAAGGCAACCTGATTGAGGA
ATCAGACATTACTCAATTACCTTATTTACAAACAATAGTTAAAGAGACCT
TAAGGTTGCACCCGCCAGTGCCGTTGTTACTCCCTCGCAAAGCCTCAGCA
GACGTAGAAATCACAGGCTTCATAATACCAAAGGGTGCGCAAGTTTTGGT
CAATGCATGGGCTATAGGCCGAGATACAAGCACATGGGATGACCCTTACT
CTTTTAAC
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