CX297867

Overview
NameCX297867
Unique NameCX297867
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12
Identity = 39/113 (34.51%), Postives = 59/113 (52.21%), Query Frame = 1
Query:  367 IRHEAETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            I+   E + +TL WA + +LNN   L K + EL+ +VGK   I ESD+++L YLQ +VKET             +   D  I G+ + KG +++ N   I  D + W +P  F
Sbjct:  316 IQAGTEASITTLIWATSLILNNPSVLEKLKAELDIQVGKERYICESDLSKLTYLQAVVKETLRLYPPAPLSRPREFEEDCTIGGYTVKKGTRLITNLSKIHTDHNVWSNPLEF 428          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12
Identity = 36/110 (32.73%), Postives = 62/110 (56.36%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGN-LIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            +T + T+ WAVTEL+ N + + K + ++ +++G     I E DI ++PYL+ ++KET             +  A +++ G+ IP   ++LVN  AIGRD   W +P  F+
Sbjct:  307 DTGAITMIWAVTELVKNPKLIKKVQGDIREQLGSNKERITEEDIEKVPYLKMVIKETFRLHPAAPLILPRETMAHIKVQGYDIPPKRRILVNVSAIGRDPKLWTNPKEFD 416          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12
Identity = 34/102 (33.33%), Postives = 58/102 (56.86%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTW 687
            +T+S+ +EWA+TELL + + L + + E+       + + E +I  + YL+ ++KE              +++ DV +    IP G QVL+NAWAIGR+ +TW
Sbjct:  294 DTSSTLMEWAMTELLRHPKCLKRLQEEVRTICKDKSSVSEEEIQNMSYLKAVIKEALRLHPPLPLMVPHESTQDVRLGDHHIPAGTQVLINAWAIGREAATW 395          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12
Identity = 37/103 (35.92%), Postives = 62/103 (60.19%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNL-IEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTW 687
            +++ + ++WA+TELL + E L   + E+ + + KGNL + E DI  + YL+ ++KET             ++  DV +  + IP G QV++NAWAIGR+ +TW
Sbjct:  295 DSSYALMDWAMTELLRHPECLRTLQEEV-RTICKGNLSVSEEDIQNMSYLKAVIKETTRLHPPLPLLAPHESIQDVILGDYHIPAGTQVMINAWAIGREAATW 396          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12
Identity = 34/102 (33.33%), Postives = 59/102 (57.84%), Query Frame = 1
Query:  385 TTSSTLEWAVTELLNNSEALSKARLELEQKVGK-GNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTW 687
            TTS+ LEW +TEL+ + +++ K + E+   +   G+ I+E ++  + YL+ ++KE                S DV++ G+ I  G +V++NAWAI RDT+ W
Sbjct:  302 TTSTLLEWTMTELIRSPKSMKKLQDEIRSTIRPHGSYIKEKEVENMKYLKAVIKEVLRLHPSLPMILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDTAIW 403          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C79F1_ARATH (Dihomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 36/105 (34.29%), Postives = 55/105 (52.38%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDP 696
            +  ++ +EW + E+L N E L KA  EL++ VG+  L++ESDI  L YL+   +ET              A  D  + G+ IPKG+ + V    +GR+   W DP
Sbjct:  332 DNPANNMEWTLGEMLKNPEILRKALKELDEVVGRDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPSHLARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDP 436          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 36/110 (32.73%), Postives = 57/110 (51.82%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXK-ASADVEI-TGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +TT+   EW + E++ N    ++ R E++  VG      + D+ ++PYLQ +VKET             + A+ADV +  G ++P G   +VN WAI  D   W DP +F
Sbjct:  353 DTTALVTEWCMAEVVRNPAVQARLRAEVDAAVGGDGCPSDGDVARMPYLQAVVKETLRAHPPGPLLSWARLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAF 462          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVG--KGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ET+   LE A+ EL+N+   + K + E+       K ++I E D++ LPYL+  +KE               ++AD +I G+ IP   +VLVN WAIGRD + W+ P  F
Sbjct:  333 ETSYLVLESAMAELMNHRRVMKKLQAEVRAYGAEKKLDMIREDDLSSLPYLKASMKEALRLHPPGPLLLPHYSTADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEF 442          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 35/110 (31.82%), Postives = 56/110 (50.91%), Query Frame = 1
Query:  385 TTSSTLEWAVTELLNNSEALSKARLELEQKVGKGN---LIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            T++ T+ WA+ EL+ N   + K + E+  ++GK N   +I   +I  L YL  ++KET             +  ++ +I G+ I    ++ VN WAIGRD   W DP  F
Sbjct:  305 TSAITMTWAMAELIRNPRVMKKVQSEIRAQIGKNNKTRIISLDEINHLSYLNMVIKETCRLHPVAPLLVPREVISEFKINGYTIQPKTRLHVNVWAIGRDPEIWKDPEEF 414          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12
Identity = 39/113 (34.51%), Postives = 59/113 (52.21%), Query Frame = 1
Query:  367 IRHEAETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            I+   E + ST+ WA+  +L N   L   + EL+ +VGK   I ESDI+ L YLQ +VKET             + + D  + G+ + KG +++ N W I  D + W DP+ F
Sbjct:  320 IQAGTEASISTIIWAMCLILKNPLILEN-KAELDIQVGKDRCICESDISNLVYLQAVVKETLRLYAPGPLSSPREFAEDCTLGGYHVKKGTRLITNIWKIHTDPNVWSDPFEF 431          
The following BLAST results are available for this feature:
BLAST of CX297867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
C82A2_SOYBN1.208e-1234.51Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71BJ_ARATH1.208e-1232.73Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH1.208e-1233.33Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH1.208e-1235.92Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH1.578e-1233.33Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C79F1_ARATH2.691e-1234.29Dihomomethionine N-hydroxylase OS=Arabidopsis thal... [more]
C78AB_ORYSJ2.691e-1232.73Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C71C3_MAIZE2.691e-1235.45Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71BA_ARATH2.691e-1231.82Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C82A4_SOYBN3.515e-1234.51Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC06006A12SK RindPdig24 Citrus clementina cDNA clone C06006A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297867 ID=CX297867; Name=CX297867; organism=Citrus clementina; type=EST; length=708bp
GAGGTTTTTTCTGAGTCTCAAACGACATTGTTTTATTGAATTTTCGGGGC
TTGACCCGGGGTTTGACCCGGGGTAAATAGCAGCACTCATAAACTTATCT
AATTGCCCAGCGTACTATCAGGAATAATAAGAACTTGGCAGCGCTTGGGG
CTGGCGAGTTCTGGCTAAATTCACTTGCAAATAACTGATGGTATATGTAA
CCAAATACAAATTTGAGTAATCTTGTTTCACTTCATCCTTTTGCGAACTT
CGTAAAAGTAGCTTAGAATCACCACTGCCACAGTAACTGCTACTCCAACT
GCACCTTGAGCTAATATGGTGCAATCATTTGCTGTTGATTTGGAGCCAGA
ACCGGCCTCGTGCCGAATTCGGCACGAGGCTGAAACGACTTCAAGCACAT
TGGAATGGGCAGTAACAGAGCTATTAAACAACTCAGAAGCATTATCAAAA
GCTAGATTGGAGTTGGAACAAAAAGTAGGCAAAGGCAACCTGATTGAGGA
ATCAGACATTACTCAATTACCTTATTTACAAACAATAGTTAAAGAGACCT
TAAGGTTGCACCCGCCAGTGCCGTTGTTACTCCCTCGCAAAGCCTCAGCA
GACGTAGAAATCACAGGCTTCATAATACCAAAGGGTGCGCAAGTTTTGGT
CAATGCATGGGCTATAGGCCGAGATACAAGCACATGGGATGACCCTTACT
CTTTTAAC
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