CX297867

Overview
NameCX297867
Unique NameCX297867
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: CP1A2_MACFU (Cytochrome P450 1A2 OS=Macaca fuscata fuscata GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 32/110 (29.09%), Postives = 50/110 (45.45%), Query Frame = 1
Query:  376 EAETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            E +T ++ + W++  L+   E   K + EL+  +G+G     SD  QLPYL+  + ET               + D  + GF IP+   V +N W +  D   W DP  F
Sbjct:  318 EFDTIATAISWSLMYLVTKPEIQRKIQKELDAVIGRGRRPRLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTTRDTTLNGFYIPRECCVFINQWQVNHDPQLWGDPSEF 427          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: CP17A_ICTPU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalurus punctatus GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 31/109 (28.44%), Postives = 57/109 (52.29%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            ETT++ L+W++  L+++ +   K + EL+ K+G+    + +D   LPYL+  ++E               A +D  I  + + KG +V+VN W++  D   W +P  FN
Sbjct:  308 ETTTTVLKWSILYLIHHPQVQRKIQEELDAKIGRDRHPQVNDRGNLPYLEATIREVLRIRPVSPLLIPHVALSDANIGEYTVQKGTRVIVNLWSLHHDEKEWKNPELFN 416          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 30/108 (27.78%), Postives = 59/108 (54.63%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ET+S+T  W + EL+ N   ++KA+ E+   +     ++  D+ +L Y++++VKET                 + E+ G+ IP  A++++N W++GR+   W+ P +F
Sbjct:  301 ETSSTTTLWVMAELMRNPAVMAKAQAEVRAALKGKTSVDVDDVQELKYMKSVVKETMRMHPPIPLIPR-SCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETF 407          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 30/108 (27.78%), Postives = 59/108 (54.63%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ET+S+T  W + EL+ N   ++KA+ E+   +     ++  D+ +L Y++++VKET                 + E+ G+ IP  A++++N W++GR+   W+ P +F
Sbjct:  301 ETSSTTTLWVMAELMRNPAVMAKAQAEVRAALKGKTSVDVDDVQELKYMKSVVKETMRMHPPIPLIPR-SCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETF 407          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 31/108 (28.70%), Postives = 59/108 (54.63%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ET+S+T  W + EL+ N E ++KA+ E+   +      +  D+ +L Y++++VKET                 + E+ G+ IP  A++++N W++GR+   W+ P +F
Sbjct:  304 ETSSTTTLWVMAELMRNPEVMAKAQAEVRAALKGKTDWDVDDVQELKYMKSVVKETMRMHPPIPLIPR-SCREECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETF 410          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 31/105 (29.52%), Postives = 58/105 (55.24%), Query Frame = 1
Query:  397 TLEWAVTELLNNSEALSKARLELEQKVGKGN-LIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            T+ WA+TEL  +   + K + E+ + +G     I E D+ ++ YL+ +++ET             +  +D++I G+ IPK   + +N ++IGRD + W++P  FN
Sbjct:  309 TMIWAMTELARHPRVMKKLQQEIREILGDNKEKITEQDLEKVHYLKLVIEETFRLHPPAPLLLPRETMSDLKIQGYNIPKNTMIEINTYSIGRDPNCWENPNDFN 413          
The following BLAST results are available for this feature:
BLAST of CX297867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
CP1A2_MACFU8.658e-1129.09Cytochrome P450 1A2 OS=Macaca fuscata fuscata GN=C... [more]
CP17A_ICTPU8.658e-1128.44Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalu... [more]
C7D95_MENSP8.658e-1127.78Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR8.658e-1127.78Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71DD_MENPI8.658e-1128.70Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71BM_ARATH8.658e-1129.52Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC06006A12SK RindPdig24 Citrus clementina cDNA clone C06006A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297867 ID=CX297867; Name=CX297867; organism=Citrus clementina; type=EST; length=708bp
GAGGTTTTTTCTGAGTCTCAAACGACATTGTTTTATTGAATTTTCGGGGC
TTGACCCGGGGTTTGACCCGGGGTAAATAGCAGCACTCATAAACTTATCT
AATTGCCCAGCGTACTATCAGGAATAATAAGAACTTGGCAGCGCTTGGGG
CTGGCGAGTTCTGGCTAAATTCACTTGCAAATAACTGATGGTATATGTAA
CCAAATACAAATTTGAGTAATCTTGTTTCACTTCATCCTTTTGCGAACTT
CGTAAAAGTAGCTTAGAATCACCACTGCCACAGTAACTGCTACTCCAACT
GCACCTTGAGCTAATATGGTGCAATCATTTGCTGTTGATTTGGAGCCAGA
ACCGGCCTCGTGCCGAATTCGGCACGAGGCTGAAACGACTTCAAGCACAT
TGGAATGGGCAGTAACAGAGCTATTAAACAACTCAGAAGCATTATCAAAA
GCTAGATTGGAGTTGGAACAAAAAGTAGGCAAAGGCAACCTGATTGAGGA
ATCAGACATTACTCAATTACCTTATTTACAAACAATAGTTAAAGAGACCT
TAAGGTTGCACCCGCCAGTGCCGTTGTTACTCCCTCGCAAAGCCTCAGCA
GACGTAGAAATCACAGGCTTCATAATACCAAAGGGTGCGCAAGTTTTGGT
CAATGCATGGGCTATAGGCCGAGATACAAGCACATGGGATGACCCTTACT
CTTTTAAC
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