CX297867

Overview
NameCX297867
Unique NameCX297867
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.991e-15
Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +  S+ +EWA+ E++NN E ++KA  EL++ VG+  L++ESDI +L Y++  ++E               A AD  I G+ +PKG+ V+++   +GR+   WD+P  F
Sbjct:  354 DNPSNAVEWALAEMVNNPEVMAKAMEELDRVVGRERLVQESDIPKLNYVKACIREAFRLHPVAPFNVPHVALADTTIAGYRVPKGSHVILSRTGLGRNPRVWDEPLRF 461          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.991e-15
Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T++ T+ WA+TEL  N   + K + E+  ++G  ++I   D+ QL YL+ ++KET             +A ++ +I G+ IP   ++ VN WAIGRD  TW DP  F
Sbjct:  303 DTSAITMTWAMTELARNPRVMKKVQSEIRTQMGNRSMISFEDMDQLEYLKMVIKETWRLHPTTPLLLPREAMSEFDINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVF 410          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 38/108 (35.19%), Postives = 63/108 (58.33%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ++++ TLEW+++ LLN+ E L K + EL+  VG+  L++ESD+ +L YL+ ++ ET               S +  I G+ +P+   VL+NAWAI RD   W +  +F
Sbjct:  305 DSSAVTLEWSMSNLLNHPEVLKKVKDELDTHVGQDRLVDESDLPKLTYLKNVINETLRLYTPAPLLLPHSTSDECNIGGYKVPQDTIVLINAWAIHRDPELWTEATTF 412          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15
Identity = 39/110 (35.45%), Postives = 64/110 (58.18%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVG-KGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            +T++ T+ WA+ EL+NN   + K + E+   +G K   IEE D+ +L YL+ ++KET             +  AD++I G+ IP+   +LV+AW++GRD   W +P  FN
Sbjct:  308 DTSAITMIWAMAELVNNPRVMKKVQDEIRSCIGIKKERIEEEDVGKLQYLKLVIKETLRLHPAAPLLLPRETMADIKIQGYDIPRKTLLLVSAWSLGRDPKYWKNPEEFN 417          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15
Identity = 42/112 (37.50%), Postives = 67/112 (59.82%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVG---KGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            +T++ TL WA+ EL+ N   + KA+ E+   +G   +G ++EE D+ +L YL+ +VKET             +  AD++I G+ IP+   +LVNAW+IGRD  +W +P  FN
Sbjct:  308 DTSAITLIWAMAELVRNPRVMKKAQDEIRTCIGIKQEGRIMEE-DLDKLQYLKLVVKETLRLHPAAPLLLPRETMADIKIQGYDIPQKRALLVNAWSIGRDPESWKNPEEFN 418          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15
Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ETT  ++EW + EL+N+ E  +K R EL+ K+G G  I E D+  LPYLQ +VKET                 D ++ GF IP  +++LVNAW +  +   W  P  F
Sbjct:  309 ETTLWSIEWGIAELVNHPEIQAKLRHELDTKLGPGVQITEPDVQNLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEF 416          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15
Identity = 37/108 (34.26%), Postives = 62/108 (57.41%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ET+   LE++++EL+NN   L+K + E+      G ++ E D++++PYL+  +KE+              ++ D EI G+ IP G +V+VNAWA+ RD + WD    F
Sbjct:  330 ETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEF 437          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15
Identity = 39/111 (35.14%), Postives = 65/111 (58.56%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVG--KGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            +T++ T+ WA+ EL+ N   + KA+ E+   +G  +   IEE D+ +L YL+ ++KET             +  AD++I G+ IP+   +LVNAW+IGR+   W++P  FN
Sbjct:  307 DTSAITMIWAMAELVKNPRVMKKAQEEIRTCIGIKQKERIEEEDVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWENPEEFN 417          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15
Identity = 37/107 (34.58%), Postives = 58/107 (54.21%), Query Frame = 1
Query:  385 TTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            T++ T+ WA+TEL+ N   + K + E+  ++G  ++I   DI QL YL+ ++ ET             +  ++ EI G+ IP   ++ VN W IGRD  TW DP  F
Sbjct:  305 TSAITMTWAMTELMRNPRVMKKVQSEIRNQIGGKSMICLDDIDQLHYLKMVINETWRLHPPAPLLVPREVMSEFEINGYTIPAKTRLYVNVWGIGRDPDTWKDPEEF 411          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15
Identity = 41/109 (37.61%), Postives = 57/109 (52.29%), Query Frame = 1
Query:  379 AETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ++TT+ TL WA+  LL +   L K + EL   +GK   + ESDI +L YL  I+KET             + + D  I G+ I KG +++ N W I RD S W DP  F
Sbjct:  342 SDTTAGTLTWAMCLLLKHPHVLEKLKEELNTYIGKERCVNESDINKLVYLHAIIKETLRLYPPAPFSSPREFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEF 450          
The following BLAST results are available for this feature:
BLAST of CX297867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
C79A1_SORBI1.991e-1534.26Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C71BW_ARATH1.991e-1535.19Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C81E1_GLYEC3.397e-1535.19Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C71BP_ARATH4.436e-1535.45Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH4.436e-1537.50Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_HELTU5.794e-1537.96Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
C71C1_MAIZE5.794e-1534.26Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71B3_ARATH5.794e-1535.14Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71BY_ARATH7.567e-1534.58Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C82A1_PEA9.883e-1537.61Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionC06006A12SK RindPdig24 Citrus clementina cDNA clone C06006A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297867 ID=CX297867; Name=CX297867; organism=Citrus clementina; type=EST; length=708bp
GAGGTTTTTTCTGAGTCTCAAACGACATTGTTTTATTGAATTTTCGGGGC
TTGACCCGGGGTTTGACCCGGGGTAAATAGCAGCACTCATAAACTTATCT
AATTGCCCAGCGTACTATCAGGAATAATAAGAACTTGGCAGCGCTTGGGG
CTGGCGAGTTCTGGCTAAATTCACTTGCAAATAACTGATGGTATATGTAA
CCAAATACAAATTTGAGTAATCTTGTTTCACTTCATCCTTTTGCGAACTT
CGTAAAAGTAGCTTAGAATCACCACTGCCACAGTAACTGCTACTCCAACT
GCACCTTGAGCTAATATGGTGCAATCATTTGCTGTTGATTTGGAGCCAGA
ACCGGCCTCGTGCCGAATTCGGCACGAGGCTGAAACGACTTCAAGCACAT
TGGAATGGGCAGTAACAGAGCTATTAAACAACTCAGAAGCATTATCAAAA
GCTAGATTGGAGTTGGAACAAAAAGTAGGCAAAGGCAACCTGATTGAGGA
ATCAGACATTACTCAATTACCTTATTTACAAACAATAGTTAAAGAGACCT
TAAGGTTGCACCCGCCAGTGCCGTTGTTACTCCCTCGCAAAGCCTCAGCA
GACGTAGAAATCACAGGCTTCATAATACCAAAGGGTGCGCAAGTTTTGGT
CAATGCATGGGCTATAGGCCGAGATACAAGCACATGGGATGACCCTTACT
CTTTTAAC
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