CX297867

Overview
NameCX297867
Unique NameCX297867
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15
Identity = 39/108 (36.11%), Postives = 63/108 (58.33%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T++ T++W + EL+NN   L + R E++  VG+  LI+E D+ +LPYLQ++VKE                    E+ GF I +   ++VNA+A+ RD +TW+DP  F
Sbjct:  311 DTSAQTIQWTMAELINNRNVLKRLREEIDSVVGETRLIQEKDLPKLPYLQSVVKE-GLRLHPPLPLMVRTFQRSCEMKGFYIAEKTTLVVNAYAVMRDPTTWEDPDEF 417          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15
Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ET+S+T  WA+ E+L N   L+KA+ E+ +        +E+D+  L YL+ ++KET             +   + EI G+ IP   +V+VN WA+GRD   WDD   F
Sbjct:  306 ETSSTTTVWAMVEMLKNPRVLAKAQAEVREAFRNKVTFDENDVEDLKYLKLVIKETMRLHAPIPLLVPRECRKETEINGYTIPVKTKVMVNVWALGRDPKYWDDVECF 413          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 1
Query:  385 TTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTW 687
            TT S LEWA+TEL+ N + + K + E+     +   + E +  ++ YLQ ++KE                S DV++ G+ IP G QV+VNAWAI RDT+TW
Sbjct:  304 TTLSFLEWAMTELMRNPKVMKKLQEEIRSSSPQDLFVTEKEAEKMNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTW 404          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15
Identity = 38/101 (37.62%), Postives = 57/101 (56.44%), Query Frame = 1
Query:  385 TTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTW 687
            T+ S LEWA+TEL+ N + + K + E+     +G  + E +  ++ YLQ ++KE                S DV + G+ IP G QV++NAWAI RDT+TW
Sbjct:  297 TSLSFLEWAMTELMRNPKVMKKLQEEIRSSSRQGLFVTEKEAEKMDYLQAVIKEALRLRPPAPLMVPRVFSEDVTLKGYNIPAGTQVIINAWAIQRDTTTW 397          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14
Identity = 37/108 (34.26%), Postives = 61/108 (56.48%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ETT  ++EW + EL+N+ E  +K R E+++ +G G+ + E D+ +LPYLQ ++KET                 D ++ GF IP  +++LVNAW +  + + W  P  F
Sbjct:  309 ETTLWSIEWGIAELVNHQEIQNKLREEMDKVLGPGHQVTEPDLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEF 416          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14
Identity = 36/108 (33.33%), Postives = 62/108 (57.41%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ETT  ++EW + EL+N+ +  +K R E+++ +G G+ + E D+ +LPYLQ ++KET                 D +++GF IP  +++LVNAW +  + + W  P  F
Sbjct:  308 ETTLWSIEWGIAELVNHQKIQNKVREEIDRVLGPGHQVTEPDLQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEF 415          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14
Identity = 37/108 (34.26%), Postives = 59/108 (54.63%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ET+S+T  WA+ E+L N    +KA+ ++ +        +E+D+ +L YL+ ++KET             +   + EI G+ IP   +V+VN WA+GRD   WDD  SF
Sbjct:  305 ETSSTTTVWAMAEMLKNPSVFAKAQAKVREAFRDKVTFDENDVEELKYLKLVIKETMRLHAPVPLLVPRECREETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESF 412          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14
Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            E +++T++W + E++ N +   + R E++  VGK  L++E+D+  LPYLQ IVKE              K +   EI GF IP+  ++ VN +AI RD   W+DP  F
Sbjct:  315 EASANTIQWTMAEIIKNPKICERLREEIDSVVGKTRLVQETDLPNLPYLQAIVKEGLRLHPPGPVVRTFKETC--EIKGFYIPEKTRLFVNVYAIMRDPDFWEDPEEF 420          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14
Identity = 39/108 (36.11%), Postives = 60/108 (55.56%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ETT  ++EW + EL+N+ E  SK R EL+  +G G  + E D+ +LPYLQ +VKET                 D ++ G+ IP  +++LVNAW +  + ++W  P  F
Sbjct:  309 ETTLWSIEWGIAELVNHPEIQSKLRNELDTVLGPGVQVTEPDLHKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPNSWKKPEEF 416          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.875e-14
Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ETT  ++EW + EL+NN E   K R EL+  +G G  I E D+ +LPYLQ ++KET                 D ++ G+ IP  +++LVNAW +  + + W+ P  F
Sbjct:  310 ETTLWSIEWGIAELVNNPEIQKKLRHELDTVLGAGVQICEPDVQKLPYLQAVIKETLRYRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEF 417          
The following BLAST results are available for this feature:
BLAST of CX297867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
C75AK_ARATH9.883e-1536.11Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C71D6_SOLCH9.883e-1535.19Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71AK_ARATH9.883e-1538.61Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71AJ_ARATH9.883e-1537.62Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
TCMO_PEA1.291e-1434.26Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_CICAR1.291e-1433.33Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
C71D7_SOLCH1.291e-1434.26Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
THAD_ARATH1.686e-1436.11Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
TCMO_ARATH1.686e-1436.11Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
TCMO_PETCR2.875e-1436.11Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]

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Properties
Property NameValue
Genbank descriptionC06006A12SK RindPdig24 Citrus clementina cDNA clone C06006A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297867 ID=CX297867; Name=CX297867; organism=Citrus clementina; type=EST; length=708bp
GAGGTTTTTTCTGAGTCTCAAACGACATTGTTTTATTGAATTTTCGGGGC
TTGACCCGGGGTTTGACCCGGGGTAAATAGCAGCACTCATAAACTTATCT
AATTGCCCAGCGTACTATCAGGAATAATAAGAACTTGGCAGCGCTTGGGG
CTGGCGAGTTCTGGCTAAATTCACTTGCAAATAACTGATGGTATATGTAA
CCAAATACAAATTTGAGTAATCTTGTTTCACTTCATCCTTTTGCGAACTT
CGTAAAAGTAGCTTAGAATCACCACTGCCACAGTAACTGCTACTCCAACT
GCACCTTGAGCTAATATGGTGCAATCATTTGCTGTTGATTTGGAGCCAGA
ACCGGCCTCGTGCCGAATTCGGCACGAGGCTGAAACGACTTCAAGCACAT
TGGAATGGGCAGTAACAGAGCTATTAAACAACTCAGAAGCATTATCAAAA
GCTAGATTGGAGTTGGAACAAAAAGTAGGCAAAGGCAACCTGATTGAGGA
ATCAGACATTACTCAATTACCTTATTTACAAACAATAGTTAAAGAGACCT
TAAGGTTGCACCCGCCAGTGCCGTTGTTACTCCCTCGCAAAGCCTCAGCA
GACGTAGAAATCACAGGCTTCATAATACCAAAGGGTGCGCAAGTTTTGGT
CAATGCATGGGCTATAGGCCGAGATACAAGCACATGGGATGACCCTTACT
CTTTTAAC
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