CX297867

Overview
NameCX297867
Unique NameCX297867
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.875e-14
Identity = 36/109 (33.03%), Postives = 59/109 (54.13%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            +  S+  EW + E++N    + KA  E+++ VGK  L+ ESD+  L Y++  VKE               ++ D  + G+ IPKG+ VL++   IGR+ S WD P+ F+
Sbjct:  329 DNPSNAAEWGMAEMINEPSIMQKAVEEIDRVVGKDRLVIESDLPNLNYVKACVKEAFRLHPVAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFD 437          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.875e-14
Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGN-LIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            +T+S T+ WA++EL+   + L KA+ E+   VG     +   D  ++PYL+ +VKET             +   D  I G+ +P   +V VNAWAIGRD ++W  P  FN
Sbjct:  331 DTSSVTILWAMSELMRKPQVLRKAQAEVRAAVGDDKPRVNSEDAAKIPYLKMVVKETLRLHPPATLLVPRETMRDTTICGYDVPANTRVFVNAWAIGRDPASWPAPDEFN 440          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.875e-14
Identity = 34/109 (31.19%), Postives = 66/109 (60.55%), Query Frame = 1
Query:  379 AETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            AET+S+T+ WA++EL+ N   ++K + E+ + +    +++ S++ +L YL++++KET             ++  + E+ G+ IP   ++ +N WAIGRD   W+DP +F
Sbjct:  300 AETSSTTISWALSELMRNPAKMAKVQAEVREALKGKTVVDLSEVQELKYLRSVLKET-LRLHPPFPLIPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTF 407          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.875e-14
Identity = 34/109 (31.19%), Postives = 66/109 (60.55%), Query Frame = 1
Query:  379 AETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            AET+S+T+ WA++EL+ N   ++K + E+ + +    +++ S++ +L YL++++KET             ++  + E+ G+ IP   ++ +N WAIGRD   W+DP +F
Sbjct:  300 AETSSTTISWALSELMRNPAKMAKVQAEVREALKGKTVVDLSEVQELKYLRSVLKET-LRLHPPFPLIPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTF 407          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14
Identity = 38/108 (35.19%), Postives = 60/108 (55.56%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ETT  ++EW + EL+N+ E   K R E+++ +G G+ + E DI +LPYLQ +VKET                 D ++ G+ IP  +++LVNAW +  + + W  P  F
Sbjct:  310 ETTLWSIEWGIAELVNHPEIQQKLRDEIDRVLGAGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEF 417          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14
Identity = 38/108 (35.19%), Postives = 60/108 (55.56%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ETT  ++EW + EL+N+ E   K R E+++ +G G+ + E DI +LPYLQ +VKET                 D ++ G+ IP  +++LVNAW +  + + W  P  F
Sbjct:  309 ETTLWSIEWGIAELVNHPEIQQKVRDEIDRVLGVGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEF 416          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14
Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T+  T+ W +T L+ N   + KA+ E+ + +   + I E DI  L YL+ +VKET             +AS DV+I G+ IPK   + VN WAI R+ + W DP +F
Sbjct:  300 DTSGHTITWVMTHLIKNPRVMKKAQAEVREVIKNKDNITEEDIEGLEYLKMVVKETLRINPLVPLLTPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAF 407          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.905e-14
Identity = 36/109 (33.03%), Postives = 66/109 (60.55%), Query Frame = 1
Query:  379 AETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            AE +S+T+ WA++EL+ N   ++K + E+ + +     ++ S++ +L Y++++VKET             ++  + EI GF IP   ++L+NAW+IGRD   W+DP +F
Sbjct:  298 AEASSTTISWALSELMRNPAKMAKVQAEVREALKGKTSVDLSEMQELKYMRSVVKETLRLHPPFPLIPR-QSREECEINGFYIPARTRILINAWSIGRDPLYWEDPDTF 405          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.905e-14
Identity = 38/108 (35.19%), Postives = 63/108 (58.33%), Query Frame = 1
Query:  385 TTSSTLEWAVTELLNNSEALSKARLELEQKVG-KGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            T+++T+ WA+TEL+ N   + K + E+   +G K + I E D+ QL Y + ++KET             +A A ++I G+ IP+  Q++VN +AIGRD   W++P  F
Sbjct:  307 TSATTILWAMTELIRNPRVMKKVQDEVRTVLGEKRDRITEQDLNQLNYFKLVIKETFRLHPAAPLLLPREAMAKIKIQGYDIPEKTQIMVNVYAIGRDPDLWENPEEF 414          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14
Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            ETT  ++EWA+ EL+N+ E  +K R EL  ++G G  + E D+ +LPYLQ ++KET                 D ++ G+ IP  +++LVNAW +  +   W  P  F
Sbjct:  309 ETTLWSIEWAIAELVNHPEIQAKLRHELVSQLGPGVQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPDQWKKPEEF 416          
The following BLAST results are available for this feature:
BLAST of CX297867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
C79A2_ARATH2.875e-1433.03Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C71E1_SORBI2.875e-1435.454-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71DI_MENSP2.875e-1431.19Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR2.875e-1431.19Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
TCMO_SOYBN3.755e-1435.19Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PHAAU3.755e-1435.19Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
C71BD_ARATH3.755e-1436.11Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C7D94_MENGR4.905e-1433.03Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C71BN_ARATH4.905e-1435.19Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
TCMO_ZINEL6.406e-1435.19Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]

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Properties
Property NameValue
Genbank descriptionC06006A12SK RindPdig24 Citrus clementina cDNA clone C06006A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297867 ID=CX297867; Name=CX297867; organism=Citrus clementina; type=EST; length=708bp
GAGGTTTTTTCTGAGTCTCAAACGACATTGTTTTATTGAATTTTCGGGGC
TTGACCCGGGGTTTGACCCGGGGTAAATAGCAGCACTCATAAACTTATCT
AATTGCCCAGCGTACTATCAGGAATAATAAGAACTTGGCAGCGCTTGGGG
CTGGCGAGTTCTGGCTAAATTCACTTGCAAATAACTGATGGTATATGTAA
CCAAATACAAATTTGAGTAATCTTGTTTCACTTCATCCTTTTGCGAACTT
CGTAAAAGTAGCTTAGAATCACCACTGCCACAGTAACTGCTACTCCAACT
GCACCTTGAGCTAATATGGTGCAATCATTTGCTGTTGATTTGGAGCCAGA
ACCGGCCTCGTGCCGAATTCGGCACGAGGCTGAAACGACTTCAAGCACAT
TGGAATGGGCAGTAACAGAGCTATTAAACAACTCAGAAGCATTATCAAAA
GCTAGATTGGAGTTGGAACAAAAAGTAGGCAAAGGCAACCTGATTGAGGA
ATCAGACATTACTCAATTACCTTATTTACAAACAATAGTTAAAGAGACCT
TAAGGTTGCACCCGCCAGTGCCGTTGTTACTCCCTCGCAAAGCCTCAGCA
GACGTAGAAATCACAGGCTTCATAATACCAAAGGGTGCGCAAGTTTTGGT
CAATGCATGGGCTATAGGCCGAGATACAAGCACATGGGATGACCCTTACT
CTTTTAAC
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