CX297867

Overview
NameCX297867
Unique NameCX297867
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13
Identity = 37/111 (33.33%), Postives = 60/111 (54.05%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVG--KGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            +T++ T+ WA+ EL+ N   + K + E+   +G  +   IEE D+ +L YL+ +VKET             +  + ++I G+ IP    +LVN W+IGRD   W +P  FN
Sbjct:  304 DTSAITMIWAMAELVKNPRVMKKVQDEIRTCIGIKQNEKIEEDDVDKLQYLKLVVKETLRLHPAAPLLLPRETMSQIKIQGYNIPSKTILLVNVWSIGRDPKHWKNPEEFN 414          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13
Identity = 37/110 (33.64%), Postives = 59/110 (53.64%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVG-KGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            +T++ T+ WA+TEL+ N   + KA+  +   +G K   I E D+ ++ YL  I+KET             +  + ++I G+ IP   Q+ +N W IGRD   W+DP  FN
Sbjct:  307 DTSAVTMIWAMTELIRNPRVMKKAQESIRTTLGLKKERITEEDLGKVEYLNHILKETFRLHPALPFVVPRETMSHIKIQGYDIPPKTQIQLNVWTIGRDPKRWNDPEEFN 416          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13
Identity = 34/109 (31.19%), Postives = 59/109 (54.13%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            +T++ T+ WA+T LL N   + K + E+ +K+   + I + D+ QL Y + ++KET              A+ D++I G+ +P+   + VN WA+    S W DP +FN
Sbjct:  300 DTSAQTMTWAMTHLLANPRVMKKLQAEIREKIKNIDEITDDDVEQLDYFKLVLKETFRISPIVPVLVPRVAAKDLKIAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFN 408          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13
Identity = 37/108 (34.26%), Postives = 57/108 (52.78%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +  ++ +EW + E+L N E L KA  EL++ VGK  L++ESDI  L YL+   +ET              A  D  + G+ IPKG+ + V    +GR+   W DP ++
Sbjct:  331 DNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIRNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLAY 438          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13
Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 1
Query:  385 TTSSTLEWAVTELLNNSEALSKARLELEQKVG-KGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            T++STL WA+TEL+ N + + K + E+   +G K   I E D+T L Y + +VKE              +  + V+I G+ IP   Q+++N +AI RD   W +P  FN
Sbjct:  304 TSASTLIWAITELVRNRKVMKKVQEEIRTTLGDKKERITEQDLTNLHYFKLVVKEIFRLHPAVPFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTNPDEFN 412          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13
Identity = 34/103 (33.01%), Postives = 62/103 (60.19%), Query Frame = 1
Query:  379 AETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTW 687
            ++T+ + LEWA+TELL + ++L++ + E+       + + E DI  + YL+ ++KE              +++ DV++  + IP G QV++NAWAIGR+ +TW
Sbjct:  293 SDTSFTLLEWAMTELLRHPKSLNRLQEEVRTICKGKSRVSEDDIQGMKYLKAVIKEALRLHPPFPMMAPHESTEDVKLRDYHIPAGTQVMMNAWAIGREVATW 395          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13
Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 1
Query:  385 TTSSTLEWAVTELLNNSEALSKARLELEQKVG-KGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            T+S+TL WA+TEL+ N   + K + E+   +G K   I E D+ QL Y + +VKE              +  + V+I G+ IP   Q+++NA+AI RD   W +P  FN
Sbjct:  304 TSSTTLIWAMTELIRNPRVMKKVQDEIRTTLGDKKERITEEDLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFN 412          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13
Identity = 35/108 (32.41%), Postives = 53/108 (49.07%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T++ T+ WA+ EL  N   + K + E+  ++     I   D  +L YL+ ++KET                 + EI G+ IP   ++ VN WAIGRD  TW DP  F
Sbjct:  304 DTSAITMTWAMAELAKNPRVMKKVQAEIRNQIKNKERISFDDTDKLEYLKMVIKETWRLHPPTPLLLPRDVITEFEINGYTIPAKTRLHVNVWAIGRDPDTWKDPEMF 411          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13
Identity = 36/110 (32.73%), Postives = 62/110 (56.36%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNL-IEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSFN 708
            +T + T+ WA+TEL+ N + + K + E+ +++G     I E DI ++PYL+ ++KET             +  A +++ G+ IP   ++LVN  AIGRD   W +P  F+
Sbjct:  307 DTGALTMIWAMTELVKNPKLIKKVQGEIREQLGSNKARITEEDIDKVPYLKMVIKETFRLHPAAPLILPRETMAHIKVQGYDIPPKRRILVNVSAIGRDPKLWTNPEEFD 416          
BLAST of CX297867 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13
Identity = 35/108 (32.41%), Postives = 58/108 (53.70%), Query Frame = 1
Query:  382 ETTSSTLEWAVTELLNNSEALSKARLELEQKVGKGNLIEESDITQLPYLQTIVKETXXXXXXXXXXXXXKASADVEITGFIIPKGAQVLVNAWAIGRDTSTWDDPYSF 705
            +T+  T+ W +T L+ N   + KA+ E+ + +   + I E DI +L YL+ ++KET             +AS  ++I G+ IPK   + VN WA+ R+ + W DP  F
Sbjct:  300 DTSGHTVTWVMTHLIKNPRVMKKAQAEVREVIKNKDDITEEDIERLEYLKMVIKETLRINPLVPLLIPREASKYIKIGGYDIPKKTWIYVNIWAVQRNPNVWKDPEVF 407          
The following BLAST results are available for this feature:
BLAST of CX297867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
C71BO_ARATH4.152e-1333.33Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH4.152e-1333.64Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71B1_THLAR4.152e-1331.19Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C79F2_ARATH5.423e-1334.26Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]
C71BT_ARATH7.082e-1334.86Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH7.082e-1333.01Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71BS_ARATH9.250e-1335.78Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BQ_ARATH9.250e-1332.41Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH9.250e-1332.73Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BE_ARATH9.250e-1332.41Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC06006A12SK RindPdig24 Citrus clementina cDNA clone C06006A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297867 ID=CX297867; Name=CX297867; organism=Citrus clementina; type=EST; length=708bp
GAGGTTTTTTCTGAGTCTCAAACGACATTGTTTTATTGAATTTTCGGGGC
TTGACCCGGGGTTTGACCCGGGGTAAATAGCAGCACTCATAAACTTATCT
AATTGCCCAGCGTACTATCAGGAATAATAAGAACTTGGCAGCGCTTGGGG
CTGGCGAGTTCTGGCTAAATTCACTTGCAAATAACTGATGGTATATGTAA
CCAAATACAAATTTGAGTAATCTTGTTTCACTTCATCCTTTTGCGAACTT
CGTAAAAGTAGCTTAGAATCACCACTGCCACAGTAACTGCTACTCCAACT
GCACCTTGAGCTAATATGGTGCAATCATTTGCTGTTGATTTGGAGCCAGA
ACCGGCCTCGTGCCGAATTCGGCACGAGGCTGAAACGACTTCAAGCACAT
TGGAATGGGCAGTAACAGAGCTATTAAACAACTCAGAAGCATTATCAAAA
GCTAGATTGGAGTTGGAACAAAAAGTAGGCAAAGGCAACCTGATTGAGGA
ATCAGACATTACTCAATTACCTTATTTACAAACAATAGTTAAAGAGACCT
TAAGGTTGCACCCGCCAGTGCCGTTGTTACTCCCTCGCAAAGCCTCAGCA
GACGTAGAAATCACAGGCTTCATAATACCAAAGGGTGCGCAAGTTTTGGT
CAATGCATGGGCTATAGGCCGAGATACAAGCACATGGGATGACCCTTACT
CTTTTAAC
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