CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_AQUAE (ATP-dependent Clp protease ATP-binding subunit clpX OS=Aquifex aeolicus GN=clpX PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.087e-29 Identity = 59/97 (60.82%), Postives = 79/97 (81.44%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +G+IPEF+GRFP++ +L LTED+LV++L EPKNAL KQY++LF + VKL FTEKALR IAK+A + TGARGLRAI+E I+ + M+E+P + Sbjct: 289 DLIRFGMIPEFIGRFPVIATLRELTEDELVRILVEPKNALVKQYQKLFELEGVKLTFTEKALREIAKEAIRRKTGARGLRAIMEDIMADIMFEVPSL 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SYMTH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Symbiobacterium thermophilum GN=clpX PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.173e-28 Identity = 58/95 (61.05%), Postives = 79/95 (83.16%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PI+V+L AL ED LV++L EPKNAL KQY++L ++N++L F E+A+R IAK+A +NTGARGLRAI+E I+T+ MYE+P Sbjct: 290 DLLKFGLIPEFIGRLPIVVTLDALDEDALVRILREPKNALVKQYQKLLQLDNIELEFEEEAVRAIAKEALRRNTGARGLRAIIEDIMTDVMYEVP 384
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CHRSD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=clpX PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.001e-28 Identity = 58/98 (59.18%), Postives = 79/98 (80.61%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEFVGR P++ +LT L+E+ L+++LTEPKN+L KQY LF+M V+L F E ALR +A KA A+NTGARGLR+ILES+L + MYE+P ++ Sbjct: 294 DLVKFGLIPEFVGRVPVIATLTELSEEALIQILTEPKNSLIKQYVHLFAMEGVELEFREDALRAVAHKAMARNTGARGLRSILESVLLDTMYEVPSLE 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_HELMI (ATP-dependent Clp protease ATP-binding subunit clpX OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=clpX PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.613e-28 Identity = 58/95 (61.05%), Postives = 78/95 (82.11%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++V+L AL ED LV++LTEPKNAL KQY++ F ++ V+L FT+ ALR IA++A +NTGARGLRAILE ++ + MY+IP Sbjct: 290 DLLKFGLIPEFVGRLPVIVTLDALDEDALVRILTEPKNALVKQYQKFFELDQVQLEFTDDALRAIAQEAIKRNTGARGLRAILEEVMLDVMYDIP 384
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_GEOLS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=clpX PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.413e-28 Identity = 62/99 (62.63%), Postives = 75/99 (75.76%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 371 DL+ YG IPEF+GR P+L SLT L ED LV++LTEPKNAL KQY++LF M V+L FT+ AL IAK+A +NTGARGLRAILE + + MYEIP T Sbjct: 291 DLLKYGYIPEFIGRLPMLASLTELDEDALVQILTEPKNALTKQYQKLFDMEGVRLRFTDGALVSIAKEALKRNTGARGLRAILEGAMLDIMYEIPSQNT 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_THETN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Thermoanaerobacter tengcongensis GN=clpX PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28 Identity = 60/99 (60.61%), Postives = 79/99 (79.80%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 371 DL+ +G+IPEF+GR PI+V+L LT+D LV++LTEPKNAL KQY++LF M+ VKL F +KAL +IA+ A + TGARGLRAILE I+ + MYEIP +T Sbjct: 288 DLLKFGMIPEFIGRVPIVVTLDPLTKDDLVRILTEPKNALVKQYEKLFEMDGVKLEFEKKALDLIAEMALERGTGARGLRAILEDIMLDVMYEIPSDET 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_HALOH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=clpX PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.604e-28 Identity = 56/95 (58.95%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ YGLIPEF+GR P++V+L L E+ LVK+LTEP+NAL KQYK+ F M+NV+L FT +AL IA+KA +NTGARGLRA++E + + MY++P Sbjct: 289 DLLRYGLIPEFIGRLPVIVTLNELVEEDLVKILTEPRNALVKQYKKFFEMDNVELEFTPEALTAIAQKALERNTGARGLRAVVEEAILDIMYDLP 383
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ALCBS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=clpX PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.604e-28 Identity = 56/99 (56.57%), Postives = 77/99 (77.78%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 371 DL+ YGLIPEF+GR P++ +L L+ED L+++LTEP+NAL KQY RLF M V+L F E AL+ IA KA + TGARGLR+ILES+L + MY++P +++ Sbjct: 295 DLVKYGLIPEFIGRLPVIATLEELSEDALIQILTEPRNALTKQYARLFEMEGVELDFREDALKAIANKAMVRKTGARGLRSILESVLLDTMYQVPSMES 393
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ALKOO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Alkaliphilus oremlandii (strain OhILAs) GN=clpX PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27 Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++V+L L E+ L+K+LTEPKNAL KQYKRLF ++ V L E+ALR+IAKKA + TGARGLR I+E I+ + MYEIP Sbjct: 289 DLLKFGLIPEFVGRLPVVVTLEQLDEEALIKILTEPKNALTKQYKRLFEIDGVHLEIEEEALRLIAKKAIERKTGARGLRGIVEGIMMDTMYEIP 383
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_VIBPA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Vibrio parahaemolyticus GN=clpX PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27 Identity = 58/95 (61.05%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY LF + N +L F E ALR IAKKA + TGARGLR+ILES+L E MYE+P Sbjct: 296 DLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAALFELENAELEFREDALRAIAKKAMERKTGARGLRSILESVLLETMYELP 390 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |