CX300035
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300035 vs. ExPASy Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 2.108e-61 Identity = 113/125 (90.40%), Postives = 118/125 (94.40%), Query Frame = 2 Query: 2 VLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPM 376 VLDATGFSR LVQYDKPYNPGYQVAYGILAEVEEHPFD++KMVFMDWRDSHL NN ELKE NS+IPTFLYAMPFSSNRIFLEETSLVARPG+ M DIQERMVARL HLGIKV+SIEEDEHCVIPM Sbjct: 214 VLDATGFSRSLVQYDKPYNPGYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLKNNVELKERNSRIPTFLYAMPFSSNRIFLEETSLVARPGLGMDDIQERMVARLSHLGIKVKSIEEDEHCVIPM 338
BLAST of CX300035 vs. ExPASy Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 3.596e-61 Identity = 110/125 (88.00%), Postives = 118/125 (94.40%), Query Frame = 2 Query: 2 VLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPM 376 VLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFD+DKMVFMDWRDSHLN +EL E N+KIPTFLYAMPFSSNRIFLEETSLVARPG+ M+DIQERMVARL HLGI+++SIEEDE CVIPM Sbjct: 219 VLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLNGKAELNERNAKIPTFLYAMPFSSNRIFLEETSLVARPGLKMEDIQERMVARLNHLGIRIKSIEEDERCVIPM 343
BLAST of CX300035 vs. ExPASy Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 1.367e-60 Identity = 110/125 (88.00%), Postives = 119/125 (95.20%), Query Frame = 2 Query: 2 VLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPM 376 VLDATGFSR LVQYDKPYNPGYQVAYGILAEVEEHPFD++KMVFMDWRDSHL NN++LKE NS+IPTFLYAMPFSSNRIFLEETSLVARPG+ + DIQERMVARL HLGIKV+SIEEDEHC+IPM Sbjct: 216 VLDATGFSRSLVQYDKPYNPGYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLKNNTDLKERNSRIPTFLYAMPFSSNRIFLEETSLVARPGLRIDDIQERMVARLNHLGIKVKSIEEDEHCLIPM 340
BLAST of CX300035 vs. ExPASy Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 3.045e-60 Identity = 110/125 (88.00%), Postives = 114/125 (91.20%), Query Frame = 2 Query: 2 VLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPM 376 VLDATGFSRCLVQYDKPY PGYQVAYGILAEVEEHPFD KMV MDWRDSHL NN ELKE N K+PTFLYAMPFSSN+IFLEETSLVARPG+ M DIQERMVARL HLGIKV+SIEEDEHCVIPM Sbjct: 216 VLDATGFSRCLVQYDKPYKPGYQVAYGILAEVEEHPFDTSKMVLMDWRDSHLGNNMELKERNRKVPTFLYAMPFSSNKIFLEETSLVARPGLRMDDIQERMVARLNHLGIKVKSIEEDEHCVIPM 340
BLAST of CX300035 vs. ExPASy Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.671e-58 Identity = 107/125 (85.60%), Postives = 115/125 (92.00%), Query Frame = 2 Query: 2 VLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPM 376 VLDATGFSRCLVQYDKPYNPGYQVAYGI+AEV+ HPFD+DKMVFMDWRD HL++ ELKE NSKIPTFLYAMPFSSNRIFLEETSLVARPG+ M+DIQERM ARLKHLGI V+ IEEDE CVIPM Sbjct: 215 VLDATGFSRCLVQYDKPYNPGYQVAYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPM 339
BLAST of CX300035 vs. ExPASy Swiss-Prot
Match: CCS_CITSI (Capsanthin/capsorubin synthase, chromoplast OS=Citrus sinensis GN=CCS PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.373e-44 Identity = 80/125 (64.00%), Postives = 102/125 (81.60%), Query Frame = 2 Query: 2 VLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPM 376 ++DA+GF+ V+YDKP N GYQ+A+GILAEVE HPFDLDKMV MDWRDSHL N L+ +N K+PTFLYAMPF SN +FLEETSLV+RP + K+++ RM ARL+H+GI+V+ + EDE C+IPM Sbjct: 219 IVDASGFASSFVEYDKPRNHGYQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLVSRPVLSYKEVKSRMAARLRHMGIRVKRVIEDEKCLIPM 343
BLAST of CX300035 vs. ExPASy Swiss-Prot
Match: NXS_SOLTU (Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.589e-43 Identity = 80/125 (64.00%), Postives = 100/125 (80.00%), Query Frame = 2 Query: 2 VLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPM 376 V+DA+GF+ ++YDKP N GYQ+A+G+L EV+ HPFDLDKMV MDWRDSHL N L+ N+K PTFLYAMPF N +FLEETSLV+RP + +++ RMVARL+HLGIKVRS+ E+E CVIPM Sbjct: 214 VVDASGFASDFIEYDKPRNHGYQIAHGVLVEVDNHPFDLDKMVLMDWRDSHLGNEPYLRVNNAKEPTFLYAMPFDRNLVFLEETSLVSRPVLSYMEVKRRMVARLRHLGIKVRSVIEEEKCVIPM 338
BLAST of CX300035 vs. ExPASy Swiss-Prot
Match: CCS_CAPAN (Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum GN=CCS PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.192e-42 Identity = 79/125 (63.20%), Postives = 100/125 (80.00%), Query Frame = 2 Query: 2 VLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPM 376 ++DA+G++ ++YDKP N GYQVA+GILAEV+ HPFDLDKM+ MDWRDSHL N L+ N+K PTFLYAMPF N +FLEETSLV+RP + +++ RMVARL+HLGIKVRS+ E+E CVI M Sbjct: 214 IVDASGYASDFIEYDKPRNHGYQVAHGILAEVDNHPFDLDKMMLMDWRDSHLGNEPYLRVKNTKEPTFLYAMPFDRNLVFLEETSLVSRPMLSYMEVKRRMVARLRHLGIKVRSVLEEEKCVITM 338
BLAST of CX300035 vs. ExPASy Swiss-Prot
Match: LCYE_SOLLC (Lycopene epsilon cyclase, chloroplastic OS=Solanum lycopersicum GN=CRTL-E-1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.207e-18 Identity = 45/103 (43.69%), Postives = 70/103 (67.96%), Query Frame = 2 Query: 68 QVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPM 376 Q AYG+ EV+ +PFD MVFMD+RD +L ++++ EA K PTFLYAMP S R+F EET L ++ +P ++++++ RL LG++++ I E+E IP+ Sbjct: 261 QTAYGVEVEVDNNPFDPSLMVFMDYRD-YLRHDAQSLEA--KYPTFLYAMPMSPTRVFFEETCLASKDAMPFDLLKKKLMLRLNTLGVRIKEIYEEEWSYIPV 360
BLAST of CX300035 vs. ExPASy Swiss-Prot
Match: LCYB_SYNE7 (Lycopene beta cyclase OS=Synechococcus elongatus (strain PCC 7942) GN=crtL PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.440e-17 Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = 2 Query: 2 VLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRSIEEDEHCVIPM 376 V+D TG +Q YQ AYGI+ + + P + + V MD+R HL+ E PTFLYAM ++ F+EETSL A P +P +++R+ RL G+ V+ I+ +E+C+ PM Sbjct: 134 VVDTTGHQAAFIQRPHSDAIAYQAAYGIIGQFSQPPIEPHQFVLMDYRSDHLS-----PEERQLPPTFLYAMDLGNDVYFVEETSLAACPAIPYDRLKQRLYQRLATRGVTVQVIQHEEYCLFPM 253 The following BLAST results are available for this feature:
BLAST of CX300035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300035 ID=CX300035; Name=CX300035; organism=Citrus clementina; type=EST; length=377bpback to top |