CX305206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_CHLRE (40S ribosomal protein S3a OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_168484 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.956e-27 Identity = 56/83 (67.47%), Postives = 67/83 (80.72%), Query Frame = -3 Query: 198 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVDRPA 446 R+KM +I+ +A SCDLK LV KFI E G++IEK+ IYPLQN FIRKVK+LKAPKFD+ KLMEVHGDYSE VG K++RPA Sbjct: 165 RKKMMEIITREATSCDLKELVAKFIPESIGKDIEKSCQGIYPLQNTFIRKVKVLKAPKFDITKLMEVHGDYSEEVGAKIERPA 247
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A2_VITVI (40S ribosomal protein S3a-2 OS=Vitis vinifera GN=GSVIVT00031140001 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.273e-25 Identity = 58/66 (87.88%), Postives = 60/66 (90.91%), Query Frame = -3 Query: 249 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 446 RRKMR+IM QAASCDLK LV KFI E+ GREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME Sbjct: 165 RRKMREIMTTQAASCDLKELVRKFIPEMIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 230
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_OSTLU (40S ribosomal protein S3a OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_28528 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 8.248e-25 Identity = 59/90 (65.56%), Postives = 68/90 (75.56%), Query Frame = -3 Query: 180 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADEPMPE 446 R KM +I+ + +CDLK LV KFI EV G+EIEK+ + IYPLQNV+IRKVKILKAPKFDL KLMEVHGDYS E VG V RP +E E Sbjct: 165 RAKMVEIITRECTTCDLKELVLKFIPEVIGKEIEKSCAGIYPLQNVYIRKVKILKAPKFDLTKLMEVHGDYSGEAVGEAVARPVEEKAEE 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_TORRU (40S ribosomal protein S3a OS=Tortula ruralis GN=RPS3A PE=2 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 1.077e-24 Identity = 57/80 (71.25%), Postives = 66/80 (82.50%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSS-IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKV 446 RRKMR+IMV +A +CDLK LV KFI EV G+EI++ S IYPLQ+ FIRKVKILKAPKFDL KLMEVHGDY+E VG K+ Sbjct: 162 RRKMREIMVKEAQTCDLKELVAKFIPEVIGKEIDEWRSQGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEVGAKI 241
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_LENED (40S ribosomal protein S1 OS=Lentinula edodes GN=RPS1 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.077e-24 Identity = 51/86 (59.30%), Postives = 67/86 (77.91%), Query Frame = -3 Query: 189 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVDRPADEP 446 R+KM +IM +A +CDLK LV+KF+ E GREIEKA+ SIYPLQNV++RK KILKAPKFD+ KLME+HG+ ++ G K+ + EP Sbjct: 165 RKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYVRKAKILKAPKFDVSKLMELHGESTDETGTKIAKDFKEP 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_COPC7 (40S ribosomal protein S1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPS1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.837e-24 Identity = 52/86 (60.47%), Postives = 67/86 (77.91%), Query Frame = -3 Query: 189 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVDRPADEP 446 R+KM +I+ +A SCDLK LV+KF+ E GREIEKA+ SIYPLQNV+IRK KILKAPKFD+ KL+E+HGD ++ G +V + EP Sbjct: 165 RKKMFEIITREATSCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYIRKAKILKAPKFDVSKLLELHGDSTDESGTRVTKDFKEP 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_LACBS (40S ribosomal protein S1 OS=Laccaria bicolor (strain S238N-H82) GN=RPS1 PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 4.094e-24 Identity = 49/86 (56.98%), Postives = 66/86 (76.74%), Query Frame = -3 Query: 189 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVDRPADEP 446 R+KM +IM +A +CDLK LV+KF+ E GREIEKA SIYPLQNV++RK KILK+PKFD+ KL+E+HGD ++ G ++ + EP Sbjct: 165 RKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKAARSIYPLQNVYVRKAKILKSPKFDMSKLLELHGDSTDETGTRIAKDFKEP 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_POSPM (40S ribosomal protein S1 OS=Postia placenta (strain ATCC 44394 / Madison 698-R) GN=RPS1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 9.119e-24 Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = -3 Query: 189 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVDRPADEP 446 R+KM +IM +A+SCDLK LV+KFI E GREIEKA IYPLQNVF+ K KILKAPKFD+ KL+E+HG+ ++ G +V + EP Sbjct: 165 RQKMFEIMTREASSCDLKELVQKFIPEAIGREIEKAARGIYPLQNVFVHKAKILKAPKFDMSKLLELHGESTDETGTRVVKDFKEP 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_ASPCL (40S ribosomal protein S1 OS=Aspergillus clavatus GN=rps1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.902e-21 Identity = 53/91 (58.24%), Postives = 66/91 (72.53%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSENVGVKVDRPADEPMPEA 446 R+KM +IM +AASC L L K I EV GREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ +++ G KV+R E + E+ Sbjct: 165 RKKMTEIMQREAASCSLAQLTHKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGQKVEREFKEQVLES 255
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_ASPOR (40S ribosomal protein S1 OS=Aspergillus oryzae GN=rps1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.243e-21 Identity = 53/91 (58.24%), Postives = 66/91 (72.53%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSENVGVKVDRPADEPMPEA 446 R+KM +IM +AASC L L K I EV GREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ +++ G KV+R E + E+ Sbjct: 165 RKKMTEIMQREAASCTLSQLTTKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGHKVEREFKEQVLES 255 The following BLAST results are available for this feature:
BLAST of CX305206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305206 ID=CX305206; Name=CX305206; organism=Citrus clementina; type=EST; length=448bpback to top |