CX305206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_SUBDO (40S ribosomal protein S3a OS=Suberites domuncula PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.999e-16 Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = -3 Query: 219 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVG 446 R+KM +M + + DLK V K I + G++IEK SIYPL +VF+RKVK+LK PKFD+G+LM++HG+ + G Sbjct: 164 RKKMVDVMTREVSQIDLKETVNKLIPDSIGKDIEKKCQSIYPLHDVFVRKVKVLKKPKFDIGRLMDLHGESAGGKG 239
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_THEAN (40S ribosomal protein S3a OS=Theileria annulata GN=TA17795 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.194e-15 Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = -3 Query: 219 RKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVG 443 +KM +M +A++ LK LV+K I E G+EIEKA SI+PLQNV +RK+K+LK PKFDL KLME H E G Sbjct: 166 KKMVAVMTNEASNSTLKELVKKVIPESIGKEIEKACKSIFPLQNVLVRKIKVLKKPKFDLTKLMESHNYSGEEEG 240
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_PICPG (40S ribosomal protein S1 OS=Pichia pastoris (strain GS115) GN=RPS1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.194e-15 Identity = 44/80 (55.00%), Postives = 54/80 (67.50%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSENVGVKV 446 R+KM +IM + ++ L L K I EV GREIEKA IYPLQNV IRKVK+LK KFDLG L+ +HG+ +E G KV Sbjct: 165 RKKMVEIMQREVSNVTLAQLTSKLIPEVIGREIEKAAEGIYPLQNVHIRKVKVLKQAKFDLGALLALHGESVTEENGKKV 244
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_BIPLU (40S ribosomal protein S3a OS=Biphyllus lunatus PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.194e-15 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------NVGVKVDRPA--DEPMPEA 446 R+KM +I+ + DLK +V K + + ++IEKA+ IYPL +V+IRKVK+LK P+F+L KL+E+HGD + G KVD+P + P+ EA Sbjct: 168 RKKMVEIITRDISGSDLKEVVNKLLPDSIAKDIEKASQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDSGKGGSGEPGEAGSKVDKPEGYEPPVQEA 266
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_THEPA (40S ribosomal protein S3a OS=Theileria parva GN=TP03_0697 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.036e-15 Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = -3 Query: 219 RKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVG 443 +KM +M +A++ LK LV+K I E G+EIEKA SI+PLQNV +RK+K+LK PKFDL KLME H + G Sbjct: 166 KKMVSVMTNEASNSTLKELVKKVIPESIGKEIEKACKSIFPLQNVLVRKIKVLKKPKFDLTKLMESHNYSGDEEG 240
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_APLCA (40S ribosomal protein S3a OS=Aplysia californica GN=RPS3A PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 2.036e-15 Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENV--------GVKVDR 446 R+KM +I+ + +S D+K +V K I + G++IEK+ IYPL +V I KVK+LK PKFD+GKLME+HG+ S G KVDR Sbjct: 165 RKKMVEIVSREVSSNDMKEVVNKLIPDSIGKDIEKSCQGIYPLHDVLIHKVKVLKKPKFDVGKLMELHGEGSTTTSKGVTSEGGEKVDR 253
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_CRYHO (40S ribosomal protein S3a OS=Cryptosporidium hominis GN=Chro.40360 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.659e-15 Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH--GDYSENVGVKV 446 R+KM +I+ A+A L+ LV+KFI E G+EIEKA I+PLQ+VFIRKVK+L P FD+ +LME H D E G KV Sbjct: 165 RKKMVEIITAEAEGTTLRDLVKKFIPESIGKEIEKACRHIFPLQHVFIRKVKVLSKPSFDVSRLMESHVGADGVEEKGTKV 245
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_ARTSF (40S ribosomal protein S3a OS=Artemia sanfranciscana PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.659e-15 Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = -3 Query: 201 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSENVGVKVDRP 446 R+KM +I+ + +S DLK V K I + ++IEK+ SIYP+ V+IRKVK+LK PKFD+GKL+++HG+ + GV + RP Sbjct: 168 RKKMTEIITKEISSGDLKEAVSKLIPDSIAKDIEKSCHSIYPIHEVYIRKVKVLKKPKFDMGKLLDMHGEGAVTKRVTTEDGTGVVISRP 257
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_TRIIF (40S ribosomal protein S3a OS=Triatoma infestans PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.473e-15 Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = -3 Query: 189 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--YSENVGVKVDRP-ADEP 446 RRKM + + ++ DL+ +V K I + ++IEKA IYPL +V+IRKVK+LK P+F+L KL+E+HGD S+ G KV RP A EP Sbjct: 168 RRKMVDNITSSISNSDLRVVVNKLIPDSIAKDIEKACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGKGSDEPGAKVSRPEAYEP 256
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_ZYGRC (40S ribosomal protein S1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.925e-15 Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = -3 Query: 192 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVDRPADE 446 R+ +I+ + + L K I EV +E+E AT I+PLQNV +RKVK+LK PKFDLG LM +HG+ S+ G KV DE Sbjct: 165 RKVFSEILTREVQNSTLAQFTSKLIPEVINKEMENATKDIFPLQNVHVRKVKLLKQPKFDLGSLMALHGEGSDETGKKVSGFKDE 249 The following BLAST results are available for this feature:
BLAST of CX305206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305206 ID=CX305206; Name=CX305206; organism=Citrus clementina; type=EST; length=448bpback to top |