CX305206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_CANGA (40S ribosomal protein S1 OS=Candida glabrata GN=RPS1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.940e-14 Identity = 42/86 (48.84%), Postives = 53/86 (61.63%), Query Frame = -3 Query: 192 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADE 446 R+ + I+ + ++ L K I EV +EIE AT I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E G KV DE Sbjct: 165 RKVISDILTREVSNSTLAQFTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGSLMALHGEGSAEEKGKKVSGFKDE 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_DROWI (40S ribosomal protein S3a OS=Drosophila willistoni GN=RpS3A PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.016e-14 Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSENV----GVKVDRPA--DEPMPEA 446 R +M I+ + + DLK LV K + ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD SE V G VDRP + P+ EA Sbjct: 168 RARMTDIINNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDISKLLELHGDGGGKTSEAVVSAEGAVVDRPEGYEPPVQEA 267
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAST (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae GN=RPS1B PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 5.016e-14 Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = -3 Query: 192 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADE 446 R+ + +I+ + + L L K I EV +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E G KV DE Sbjct: 165 RKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS7 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS1B PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.016e-14 Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = -3 Query: 192 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADE 446 R+ + +I+ + + L L K I EV +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E G KV DE Sbjct: 165 RKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS6 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain AWRI1631) GN=RPS1B PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.016e-14 Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = -3 Query: 192 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADE 446 R+ + +I+ + + L L K I EV +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E G KV DE Sbjct: 165 RKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS1 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS1B PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.016e-14 Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = -3 Query: 192 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADE 446 R+ + +I+ + + L L K I EV +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E G KV DE Sbjct: 165 RKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_DROSE (40S ribosomal protein S3a OS=Drosophila sechellia GN=RpS3A PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.551e-14 Identity = 40/100 (40.00%), Postives = 59/100 (59.00%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSENVGVKVDRPA--DEPMPEA 446 R +M I+ + + DLK LV K + ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD + G +DRP + P+ EA Sbjct: 168 RARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEA 267
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_DROPS (40S ribosomal protein S3a OS=Drosophila pseudoobscura pseudoobscura GN=RpS3A PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.551e-14 Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENV--------GVKVDRPA--DEPMPEA 446 R +M I+ + + DLK LV K + ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD G VDRP + P+ EA Sbjct: 168 RARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKTTEAVVSAEGAVVDRPEGYEPPVQEA 267
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_DROPE (40S ribosomal protein S3a OS=Drosophila persimilis GN=RpS3A PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.551e-14 Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENV--------GVKVDRPA--DEPMPEA 446 R +M I+ + + DLK LV K + ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD G VDRP + P+ EA Sbjct: 168 RARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKTTEAVVSAEGAVVDRPEGYEPPVQEA 267
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_DROMO (40S ribosomal protein S3a OS=Drosophila mojavensis GN=RpS3A PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.551e-14 Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENV--------GVKVDRPA--DEPMPEA 446 R +M I+ + + DLK LV K + ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD G +DRP + P+ EA Sbjct: 168 RARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDISKLLELHGDGGGKTTEAVVSAEGAVIDRPEGYEPPVQEA 267 The following BLAST results are available for this feature:
BLAST of CX305206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305206 ID=CX305206; Name=CX305206; organism=Citrus clementina; type=EST; length=448bpback to top |